© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g5676.t1 |
| Gene name | |
| Location | scaffold_040:24263..26818 |
| Strand | - |
| Gene length (bp) | 2555 |
| Transcript length (bp) | 2034 |
| Coding sequence length (bp) | 2034 |
| Protein length (aa) | 678 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00474 | SSF | Sodium:solute symporter family | 1.9E-19 | 58 | 474 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016020 | membrane | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0009987 | cellular process | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005215 | transporter activity | No |
| GO:0005575 | cellular_component | No |
| GO:0003674 | molecular_function | No |
| GO:0006810 | transport | No |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 21 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 22 | 44 | 22 |
| 2 | 65 | 87 | 22 |
| 3 | 97 | 119 | 22 |
| 4 | 145 | 167 | 22 |
| 5 | 172 | 194 | 22 |
| 6 | 206 | 225 | 19 |
| 7 | 264 | 286 | 22 |
| 8 | 293 | 315 | 22 |
| 9 | 368 | 390 | 22 |
| 10 | 411 | 433 | 22 |
| 11 | 437 | 459 | 22 |
| 12 | 466 | 485 | 19 |
| 13 | 500 | 522 | 22 |
| 14 | 575 | 594 | 19 |
| 15 | 609 | 631 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g5676.t1 MSEIQARAAGASVQPPLYQAVGYVIVVVLGLIIAGVMMVITKILKKTTGEDNKKTEMFMTANRTVRTGLTASAVI SSWLWTTAMLGASFVGYDYGVAGPFWFAAGCSPMIVFFALIGISCKRKIPDAHTSLEVVRIRYGRIAHAVFMTLC LINNIFACANMLLGAAAVISAITGMHIIAATFLLPVGVTVYTFVGGIKATFLTDYFHTAIILIIACYLSVKAFTF EEVGSIGKLYELVQAAAQRHPVSGNQDGTYLTMTSKGAILFGILHICSNFGLVIMDTSYFIKAFSAAPSSVVPGY TIGGIAYFAIPWALGTIMSSLALGLENTASFPTYPRRMTSTEVSNGLVLPYAAMTIAGKGGAAAVLLITFMAVTS TLSAQVIAVSSILSFDVYREYINRAASDRDIIRASHFGVIFFAAFSAGFSTMLHYVGIDLGWTLYMLGVVTCPGI FPMAFTILWRRQSRAAAILSPILGMATGIGVWLGTAQHFYGAVSVSSTGQILPCVYGTVASAFSPIVYSIVITLV KPQRYDWAEFRKEKLGLERLDSDSDITVNGQGSEEQQTRSSFDSQELKRWGRIAAFWSIATFLGHWVLWPLPMYG SKYVFGKGFFTAWVIVGIIWLWITMLVAIFYPLLDGGMQQMLQISRALRGRREAVTSTSLPSVNNDSPEVFRVNE KS* |
| Coding | >Ani_SJS72_1|g5676.t1 ATGTCAGAGATTCAAGCTCGCGCAGCAGGAGCATCAGTGCAACCGCCACTGTACCAGGCCGTTGGATATGTTATT GTCGTGGTGCTAGGGCTCATTATCGCCGGTGTGATGATGGTCATCACCAAGATCCTTAAGAAAACAACGGGTGAG GATAACAAGAAGACTGAGATGTTCATGACTGCCAATCGCACCGTTCGGACCGGCTTGACAGCATCCGCAGTAATC TCGTCCTGGTTGTGGACAACAGCAATGCTAGGAGCATCGTTTGTAGGGTATGACTATGGCGTGGCTGGTCCCTTC TGGTTCGCCGCAGGCTGCAGTCCCATGATCGTCTTTTTCGCCTTGATCGGGATATCCTGCAAGAGAAAGATTCCA GATGCACACACATCGCTCGAAGTGGTCCGGATCCGATATGGTCGCATTGCACACGCGGTCTTTATGACCCTGTGC TTGATAAACAACATATTTGCCTGCGCTAACATGCTTTTGGGCGCTGCTGCTGTTATCTCCGCCATAACTGGGATG CATATCATTGCTGCGACATTTTTACTGCCAGTTGGTGTTACTGTGTACACCTTCGTAGGCGGCATTAAAGCCACA TTCCTTACGGACTACTTCCACACGGCGATCATTCTTATCATCGCATGCTATCTCTCGGTCAAAGCATTCACTTTC GAAGAGGTTGGCTCAATTGGTAAATTATATGAGCTCGTCCAAGCTGCTGCACAGCGCCACCCTGTGTCAGGAAAT CAAGATGGGACGTACCTGACCATGACTTCGAAGGGTGCTATCCTGTTCGGGATACTTCATATTTGCTCCAACTTC GGCCTAGTGATCATGGACACCAGCTACTTCATCAAAGCTTTTTCCGCTGCTCCCTCCTCAGTAGTACCGGGATAC ACCATCGGTGGGATTGCCTACTTTGCCATTCCCTGGGCTCTAGGAACCATTATGAGCTCCCTTGCCTTAGGTCTT GAAAACACAGCGTCCTTCCCGACATATCCCCGCCGCATGACCTCCACAGAAGTGAGCAACGGCCTTGTCCTTCCA TACGCGGCCATGACCATTGCAGGAAAAGGCGGGGCAGCTGCAGTTCTCCTTATTACCTTCATGGCAGTAACTTCG ACCCTCTCCGCGCAAGTCATTGCCGTCAGCTCTATCCTAAGCTTCGACGTGTACCGAGAATACATTAATAGGGCG GCATCAGACAGGGACATCATCCGTGCTAGTCACTTCGGTGTCATTTTCTTTGCCGCGTTTTCTGCTGGATTCAGC ACTATGCTCCATTATGTCGGTATTGATCTGGGCTGGACACTATATATGCTCGGTGTGGTAACCTGTCCTGGAATC TTTCCCATGGCCTTCACAATCCTCTGGCGTCGACAGAGCAGAGCAGCCGCCATCCTGTCCCCAATTCTGGGAATG GCGACCGGCATCGGCGTATGGTTGGGTACAGCACAGCACTTCTACGGTGCCGTGTCTGTCAGCTCAACGGGGCAA ATACTACCTTGCGTATATGGAACTGTAGCGTCTGCTTTCTCGCCAATTGTCTATTCCATCGTGATTACCCTAGTC AAACCGCAGAGGTATGACTGGGCGGAATTCCGCAAGGAGAAGCTGGGACTCGAGCGACTGGATAGTGATAGTGAT ATCACGGTGAATGGTCAAGGTAGTGAAGAGCAGCAAACTAGGTCCTCGTTTGATTCCCAAGAGCTGAAGAGATGG GGTCGTATCGCTGCTTTTTGGTCGATTGCGACTTTCTTGGGCCATTGGGTGTTGTGGCCATTGCCGATGTACGGA TCAAAATATGTTTTCGGAAAGGGATTCTTCACTGCTTGGGTTATTGTGGGAATTATCTGGTTGTGGATTACCATG CTCGTGGCGATATTCTATCCCCTTCTCGATGGGGGAATGCAGCAGATGTTGCAAATATCGCGGGCCCTGCGGGGA AGGAGAGAGGCAGTCACATCCACATCACTACCATCAGTGAATAATGATTCTCCCGAGGTCTTCAGGGTGAATGAG AAGTCTTGA |
| Transcript | >Ani_SJS72_1|g5676.t1 ATGTCAGAGATTCAAGCTCGCGCAGCAGGAGCATCAGTGCAACCGCCACTGTACCAGGCCGTTGGATATGTTATT GTCGTGGTGCTAGGGCTCATTATCGCCGGTGTGATGATGGTCATCACCAAGATCCTTAAGAAAACAACGGGTGAG GATAACAAGAAGACTGAGATGTTCATGACTGCCAATCGCACCGTTCGGACCGGCTTGACAGCATCCGCAGTAATC TCGTCCTGGTTGTGGACAACAGCAATGCTAGGAGCATCGTTTGTAGGGTATGACTATGGCGTGGCTGGTCCCTTC TGGTTCGCCGCAGGCTGCAGTCCCATGATCGTCTTTTTCGCCTTGATCGGGATATCCTGCAAGAGAAAGATTCCA GATGCACACACATCGCTCGAAGTGGTCCGGATCCGATATGGTCGCATTGCACACGCGGTCTTTATGACCCTGTGC TTGATAAACAACATATTTGCCTGCGCTAACATGCTTTTGGGCGCTGCTGCTGTTATCTCCGCCATAACTGGGATG CATATCATTGCTGCGACATTTTTACTGCCAGTTGGTGTTACTGTGTACACCTTCGTAGGCGGCATTAAAGCCACA TTCCTTACGGACTACTTCCACACGGCGATCATTCTTATCATCGCATGCTATCTCTCGGTCAAAGCATTCACTTTC GAAGAGGTTGGCTCAATTGGTAAATTATATGAGCTCGTCCAAGCTGCTGCACAGCGCCACCCTGTGTCAGGAAAT CAAGATGGGACGTACCTGACCATGACTTCGAAGGGTGCTATCCTGTTCGGGATACTTCATATTTGCTCCAACTTC GGCCTAGTGATCATGGACACCAGCTACTTCATCAAAGCTTTTTCCGCTGCTCCCTCCTCAGTAGTACCGGGATAC ACCATCGGTGGGATTGCCTACTTTGCCATTCCCTGGGCTCTAGGAACCATTATGAGCTCCCTTGCCTTAGGTCTT GAAAACACAGCGTCCTTCCCGACATATCCCCGCCGCATGACCTCCACAGAAGTGAGCAACGGCCTTGTCCTTCCA TACGCGGCCATGACCATTGCAGGAAAAGGCGGGGCAGCTGCAGTTCTCCTTATTACCTTCATGGCAGTAACTTCG ACCCTCTCCGCGCAAGTCATTGCCGTCAGCTCTATCCTAAGCTTCGACGTGTACCGAGAATACATTAATAGGGCG GCATCAGACAGGGACATCATCCGTGCTAGTCACTTCGGTGTCATTTTCTTTGCCGCGTTTTCTGCTGGATTCAGC ACTATGCTCCATTATGTCGGTATTGATCTGGGCTGGACACTATATATGCTCGGTGTGGTAACCTGTCCTGGAATC TTTCCCATGGCCTTCACAATCCTCTGGCGTCGACAGAGCAGAGCAGCCGCCATCCTGTCCCCAATTCTGGGAATG GCGACCGGCATCGGCGTATGGTTGGGTACAGCACAGCACTTCTACGGTGCCGTGTCTGTCAGCTCAACGGGGCAA ATACTACCTTGCGTATATGGAACTGTAGCGTCTGCTTTCTCGCCAATTGTCTATTCCATCGTGATTACCCTAGTC AAACCGCAGAGGTATGACTGGGCGGAATTCCGCAAGGAGAAGCTGGGACTCGAGCGACTGGATAGTGATAGTGAT ATCACGGTGAATGGTCAAGGTAGTGAAGAGCAGCAAACTAGGTCCTCGTTTGATTCCCAAGAGCTGAAGAGATGG GGTCGTATCGCTGCTTTTTGGTCGATTGCGACTTTCTTGGGCCATTGGGTGTTGTGGCCATTGCCGATGTACGGA TCAAAATATGTTTTCGGAAAGGGATTCTTCACTGCTTGGGTTATTGTGGGAATTATCTGGTTGTGGATTACCATG CTCGTGGCGATATTCTATCCCCTTCTCGATGGGGGAATGCAGCAGATGTTGCAAATATCGCGGGCCCTGCGGGGA AGGAGAGAGGCAGTCACATCCACATCACTACCATCAGTGAATAATGATTCTCCCGAGGTCTTCAGGGTGAATGAG AAGTCTTGA |
| Gene | >Ani_SJS72_1|g5676.t1 ATGTCAGAGATTCAAGCTCGCGCAGCAGGAGCATCAGTGCAACCGCCACTGTACCAGGCCGTTGGATATGTTATT GTCGTGGTGCTAGGGCTCATTATCGCCGGTGGTATGTTTACCTCAAGACAGCCGAGTATTGCAGCTGACAAAGTA GTGATGATGGTCATCACCAAGATCCTTAAGAAAACAACGGGTGAGGATAACAAGAAGACTGAGATGTATGTCCAA CCGCACTCATGGCATTTTACATGCTAATTGCTCAGGTTCATGACTGCCAATCGCACCGTTCGGACCGGCTTGACA GCATCCGCAGTAATCTCGGTACGAGTCTACCCTCGGTAGCGATATATCCCCTACTAAGTAAACAGTCCTGGTTGT GGACAACAGCAATGCTAGGAGCATCGTTTGTAGGGTATGACTATGGCGTGGCTGGTCCCTTCTGGTTCGCCGCAG GCTGCAGTCCCATGATCGTCTTTTTCGCCTTGATCGGGATATCCTGCAAGAGAAAGATTCCAGATGCACACACAT CGCTCGAAGTGGTCCGGATCCGATATGGTAGGCTGCATGAAAGCTATACTTATCGACTTGATATTGACGTGTTCA GGTCGCATTGCACACGCGGTCTTTATGACCCTGTGCTTGATAAACAACATATTTGCCTGCGCTAACATGCTTTTG GGCGCTGCTGCTGTTATCTCCGCCATGTAAGTGGGCCACCAGATTGACGAACATTGCTGACTATATAGAACTGGG ATGCATATCATTGCTGCGACATTTTTACTGCCAGTTGGTGTTACTGTGTACACCTTCGTAGGCGGCATTAAAGCC ACGTAAGTGCCCTGCTGAGGAAGATGTACACTATGCTTACCGGAGAAGATTCCTTACGGACTACTTCCACACGGC GATCATTCTTATCATCGCATGCTATCTCTCGGTCAAAGCATTCACTTTCGAAGAGGTTGGCTCAATTGGTAAATT ATATGAGCTCGTCCAAGCTGCTGCACAGCGCCACCCTGTGTCAGGAAATCAAGATGGGACGTACCTGACCATGAC TTCGAAGGGTGTATGTACTATGCTCCATGCTGTTGTCTCCGCTAACAAACGCAGGCTATCCTGTTCGGGATACTT CATATTTGCTCCAACTTCGGCCTAGTGATCGTAAGTATAAACACACCGACCTGAGGTATCATTAACATTTCTGCC AGATGGACACCAGCTACTTCATCAAAGCTTTTTCCGCTGCTCCCTCCTCAGTAGTACCGGGATACACCATCGGTG GGATTGCCTACTTTGCCATTCCCTGGGCTCTAGGAACCATTATGAGCTCCCTTGCCTTAGGTCTTGAAAACACAG CGTCCTTCCCGACATATCCCCGCGTAGGTACTCTTCACCTTTGATCCCAGGAGATGCTAATCAATGCAGCGCATG ACCTCCACAGAAGTGAGCAACGGCCTTGTCCTTCCATACGCGGCCATGACCATTGCAGGAAAAGGCGGGGCAGCT GCAGTTCTCCTTATTACCTTCATGGCAGTAACTTCGACCCTCTCCGCGCAAGTCATTGCCGTCAGCTCTATCCTA AGCTTCGACGTGTACCGAGAATACATTAATAGGGCGGCATCAGACAGGGACATCATCCGTGCTAGTCACTTCGGT GTCATTTTCTTTGCCGCGTTTTCTGCTGGATTCAGCACTATGCTCCATTATGTCGGTATTGATCTGGGCTGGACA CTATATATGCTCGGTAAGCCTCCACTTCAACCAAGGTCGGTCCAAATACTTATGGAAATAGGTGTGGTAACCTGT CCTGGAATCTTTCCCATGGCCTTCACAATCCTCTGGCGTCGACAGAGCAGAGCAGCCGCCATCCTGTCCCCAATT CTGGGAATGGCGACCGGCATCGGCGTATGGTTGGGTACAGCACAGCACTTCTACGGTGCCGTGTCTGTCAGCTCA ACGGGGCAAATACTACCTTGCGTATATGGAACTGTAGCGTCTGCTTTCTCGCCAATTGTCTATTCCATCGTGATT ACCCTAGTCAAACCGCAGAGGTATGACTGGGCGGAATTCCGCAAGGAGAAGCTGGGACTCGAGCGACTGGATAGT GATAGTGATATCACGGTGAATGGTCAAGGTAGTGAAGAGCAGCAAACTAGGTCCTCGTTTGATTCCCAAGAGCTG AAGAGATGGGGTCGTATCGCTGCTTTTTGGTCGATTGCGACTTTCTTGGGCCATTGGGTGTTGTGGCCATTGCCG ATGTACGGATCAAAATATGTTTTCGGAAAGGGAGTGAGTATTTGTCACCGTTGCTTCTTGTGTGAATGTCGGTGG ATTGCTAACAGATTCGTTAGTTCTTCACTGCTTGGGTTATTGTGGGAATTATCTGGTTGTGGATTACCATGCTCG TGGCGATATTCTATCCCCTTCTCGATGGGGGAATGCAGCAGATGTTGCAAATATCGCGGGCCCTGCGGGGAAGGA GAGAGGCAGTCACATCCACATCACTACCATCAGTGAATAATGATTCTCCCGAGGTCTTCAGGGTGAATGAGAAGT CTTGA |