© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g5672.t1 |
| Gene name | |
| Location | scaffold_040:7983..9475 |
| Strand | - |
| Gene length (bp) | 1492 |
| Transcript length (bp) | 1356 |
| Coding sequence length (bp) | 1356 |
| Protein length (aa) | 452 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF03663 | Glyco_hydro_76 | Glycosyl hydrolase family 76 | 5.7E-158 | 28 | 392 |
| SignalP signal predicted | Location | Score |
|---|---|---|
| Yes | 1 - 18 | 0.99908 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 428 | 450 | 22 |
| CAZyme category | E-value | Start | End |
|---|---|---|---|
| GH76 | 1.4E-113 | 27 | 392 |
| Orthofinder run ID | 3 |
| Orthogroup | 2360 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g5672.t1 MLLRIWHILYTFIVVVQAIDYDVDDPDSIKAACHSVARQMLTHYTGNQPGDNPGNLPDPYYWWEAGAMFTALVDY WYLTSDDTWNNITTQGITWQAGPSGSFMPANQTRTEGNDDQSFWAFAAMSAAERNFPDPPPSSGSPGWLAMAQAV FNTQAARWDKSTCNGGLRWQIFTFNNGWTYKNTISNGCFFNLAARLAKYTGNSTYADWADTVWDWTGEVGFMTDT YRFWDGADVSSGCGDWNYIEWTYNTGVYLLGAAVMYNLTESPVWKARTEGILNASFVFFQDDVMYERACEPVSTC QVDQRSFKGYLARWMAATTQMAPFTYDLVMPKLRASAKAAAETCTGGELQATCGLKWTDRKWDGMDDVGIQMAAL EVMQSTLISRVDPPVTQDTGGTSQGNPAGGEPGPPPAPVPEGLRLEITKADRAGAGMMTVMLSMIVIGSTGWMVY E* |
| Coding | >Ani_SJS72_1|g5672.t1 ATGTTGCTGCGAATATGGCACATCTTGTATACCTTCATCGTAGTCGTGCAGGCCATTGACTACGATGTCGACGAT CCAGACTCTATCAAAGCAGCCTGCCACTCCGTCGCCCGCCAAATGCTAACCCACTACACGGGCAACCAACCCGGC GACAACCCGGGCAACCTTCCCGACCCCTACTACTGGTGGGAAGCCGGCGCCATGTTCACAGCGCTAGTCGACTAC TGGTACCTCACCTCCGACGACACATGGAACAACATAACGACACAAGGCATAACCTGGCAAGCCGGGCCCAGCGGC TCCTTCATGCCAGCGAACCAAACCCGCACCGAGGGCAACGACGACCAATCCTTTTGGGCTTTCGCAGCCATGTCC GCCGCAGAGCGAAATTTCCCAGACCCGCCTCCATCCTCCGGAAGCCCAGGGTGGCTCGCCATGGCGCAAGCCGTA TTCAACACTCAAGCTGCGCGGTGGGACAAGAGTACCTGTAACGGCGGGCTACGATGGCAGATATTCACGTTCAAC AATGGCTGGACGTATAAGAATACCATCTCGAACGGATGTTTTTTCAATCTTGCTGCTAGGCTGGCCAAGTATACA GGGAATAGCACGTATGCGGACTGGGCGGATACAGTGTGGGACTGGACGGGCGAGGTAGGGTTCATGACGGATACG TATCGGTTTTGGGATGGGGCGGATGTGAGCAGTGGGTGTGGGGATTGGAATTATATTGAGTGGACGTATAATACG GGCGTTTATCTGCTGGGGGCGGCGGTTATGTATAATTTGACTGAATCGCCCGTCTGGAAAGCCCGAACAGAAGGC ATTCTCAACGCCAGCTTCGTCTTCTTCCAAGACGATGTCATGTATGAGCGGGCATGTGAACCTGTGAGCACATGC CAGGTCGATCAGCGCTCCTTCAAGGGATACTTGGCGCGCTGGATGGCCGCGACAACGCAAATGGCGCCGTTCACG TATGACCTGGTGATGCCGAAGCTGAGGGCGTCGGCCAAGGCGGCGGCGGAGACATGCACAGGGGGTGAACTCCAG GCGACGTGCGGGTTGAAGTGGACGGATCGGAAGTGGGATGGAATGGATGATGTGGGGATCCAGATGGCGGCGCTG GAGGTGATGCAGTCGACGTTGATCAGTAGGGTTGATCCTCCTGTCACGCAGGACACAGGCGGCACGAGTCAGGGC AATCCGGCGGGTGGAGAGCCAGGACCCCCGCCGGCGCCGGTGCCGGAGGGACTGAGGTTGGAGATCACGAAGGCG GATCGGGCGGGGGCAGGGATGATGACGGTGATGCTTTCGATGATAGTTATTGGGTCCACGGGATGGATGGTTTAC GAGTAA |
| Transcript | >Ani_SJS72_1|g5672.t1 ATGTTGCTGCGAATATGGCACATCTTGTATACCTTCATCGTAGTCGTGCAGGCCATTGACTACGATGTCGACGAT CCAGACTCTATCAAAGCAGCCTGCCACTCCGTCGCCCGCCAAATGCTAACCCACTACACGGGCAACCAACCCGGC GACAACCCGGGCAACCTTCCCGACCCCTACTACTGGTGGGAAGCCGGCGCCATGTTCACAGCGCTAGTCGACTAC TGGTACCTCACCTCCGACGACACATGGAACAACATAACGACACAAGGCATAACCTGGCAAGCCGGGCCCAGCGGC TCCTTCATGCCAGCGAACCAAACCCGCACCGAGGGCAACGACGACCAATCCTTTTGGGCTTTCGCAGCCATGTCC GCCGCAGAGCGAAATTTCCCAGACCCGCCTCCATCCTCCGGAAGCCCAGGGTGGCTCGCCATGGCGCAAGCCGTA TTCAACACTCAAGCTGCGCGGTGGGACAAGAGTACCTGTAACGGCGGGCTACGATGGCAGATATTCACGTTCAAC AATGGCTGGACGTATAAGAATACCATCTCGAACGGATGTTTTTTCAATCTTGCTGCTAGGCTGGCCAAGTATACA GGGAATAGCACGTATGCGGACTGGGCGGATACAGTGTGGGACTGGACGGGCGAGGTAGGGTTCATGACGGATACG TATCGGTTTTGGGATGGGGCGGATGTGAGCAGTGGGTGTGGGGATTGGAATTATATTGAGTGGACGTATAATACG GGCGTTTATCTGCTGGGGGCGGCGGTTATGTATAATTTGACTGAATCGCCCGTCTGGAAAGCCCGAACAGAAGGC ATTCTCAACGCCAGCTTCGTCTTCTTCCAAGACGATGTCATGTATGAGCGGGCATGTGAACCTGTGAGCACATGC CAGGTCGATCAGCGCTCCTTCAAGGGATACTTGGCGCGCTGGATGGCCGCGACAACGCAAATGGCGCCGTTCACG TATGACCTGGTGATGCCGAAGCTGAGGGCGTCGGCCAAGGCGGCGGCGGAGACATGCACAGGGGGTGAACTCCAG GCGACGTGCGGGTTGAAGTGGACGGATCGGAAGTGGGATGGAATGGATGATGTGGGGATCCAGATGGCGGCGCTG GAGGTGATGCAGTCGACGTTGATCAGTAGGGTTGATCCTCCTGTCACGCAGGACACAGGCGGCACGAGTCAGGGC AATCCGGCGGGTGGAGAGCCAGGACCCCCGCCGGCGCCGGTGCCGGAGGGACTGAGGTTGGAGATCACGAAGGCG GATCGGGCGGGGGCAGGGATGATGACGGTGATGCTTTCGATGATAGTTATTGGGTCCACGGGATGGATGGTTTAC GAGTAA |
| Gene | >Ani_SJS72_1|g5672.t1 ATGTTGCTGCGAATATGGCACATCTTGTATACCTTCATCGTAGTCGTGCAGGCCATTGACTACGATGTCGACGAT CCAGGTACTGTCCTTACCACCTTAATACACAACCCCATTACCTACCTACGTACCTGAACGAACCAGCTAACTAAC CTGAATAGACTCTATCAAAGCAGCCTGCCACTCCGTCGCCCGCCAAATGCTAACCCACTACACGGGCAACCAACC CGGCGACAACCCGGGCAACCTTCCCGACCCCTACTACTGGTGGGAAGCCGGCGCCATGTTCACAGCGCTAGTCGA CTACTGGTACCTCACCTCCGACGACACATGGAACAACATAACGACACAAGGCATAACCTGGCAAGCCGGGCCCAG CGGCTCCTTCATGCCAGCGAACCAAACCCGCACCGAGGGCAACGACGACCAATCCTTTTGGGCTTTCGCAGCCAT GTCCGCCGCAGAGCGAAATTTCCCAGACCCGCCTCCATCCTCCGGAAGCCCAGGGTGGCTCGCCATGGCGCAAGC CGTATTCAACACTCAAGCTGCGCGGTGGGACAAGAGTACCTGTAACGGCGGGCTACGATGGCAGATATTCACGTT CAACAATGGCTGGACGTATAAGAATACCATCTCGAACGGATGTTTTTTCAATCTTGCTGCTAGGCTGGCCAAGTA TACAGGGAATAGCACGTATGCGGACTGGGCGGATACAGTGTGGGACTGGACGGGCGAGGTAGGGTTCATGACGGA TACGTATCGGTTTTGGGATGGGGCGGATGTGAGCAGTGGGTGTGGGGATTGGAATTATATTGAGTGGACGTATAA TACGGGCGTTTATCTGCTGGGGGCGGCGGTTATGTATAATTTGGTGGGTTTCTTTCTCCCCTGATTGTGATTATT GGTGGGAGGTGGCTAATGGTGACAGACTGAATCGCCCGTCTGGAAAGCCCGAACAGAAGGCATTCTCAACGCCAG CTTCGTCTTCTTCCAAGACGATGTCATGTATGAGCGGGCATGTGAACCTGTGAGCACATGCCAGGTCGATCAGCG CTCCTTCAAGGGATACTTGGCGCGCTGGATGGCCGCGACAACGCAAATGGCGCCGTTCACGTATGACCTGGTGAT GCCGAAGCTGAGGGCGTCGGCCAAGGCGGCGGCGGAGACATGCACAGGGGGTGAACTCCAGGCGACGTGCGGGTT GAAGTGGACGGATCGGAAGTGGGATGGAATGGATGATGTGGGGATCCAGATGGCGGCGCTGGAGGTGATGCAGTC GACGTTGATCAGTAGGGTTGATCCTCCTGTCACGCAGGACACAGGCGGCACGAGTCAGGGCAATCCGGCGGGTGG AGAGCCAGGACCCCCGCCGGCGCCGGTGCCGGAGGGACTGAGGTTGGAGATCACGAAGGCGGATCGGGCGGGGGC AGGGATGATGACGGTGATGCTTTCGATGATAGTTATTGGGTCCACGGGATGGATGGTTTACGAGTAA |