© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g5660.t1 |
| Gene name | |
| Location | scaffold_039:250682..252260 |
| Strand | - |
| Gene length (bp) | 1578 |
| Transcript length (bp) | 1578 |
| Coding sequence length (bp) | 1578 |
| Protein length (aa) | 526 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 1.4E-15 | 57 | 399 |
| PF07690 | MFS_1 | Major Facilitator Superfamily | 7.6E-09 | 388 | 517 |
| PF00083 | Sugar_tr | Sugar (and other) transporter | 9.5E-16 | 96 | 522 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0009987 | cellular process | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005215 | transporter activity | No |
| GO:0005575 | cellular_component | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0003674 | molecular_function | No |
| GO:0006810 | transport | No |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 35 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 56 | 78 | 22 |
| 2 | 93 | 112 | 19 |
| 3 | 119 | 138 | 19 |
| 4 | 148 | 170 | 22 |
| 5 | 177 | 199 | 22 |
| 6 | 219 | 241 | 22 |
| 7 | 334 | 356 | 22 |
| 8 | 376 | 398 | 22 |
| 9 | 411 | 428 | 17 |
| 10 | 433 | 455 | 22 |
| 11 | 468 | 490 | 22 |
| 12 | 495 | 517 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g5660.t1 MTGASKPNESEPVLSTLEGASNPPTPNAAAAAYRYKADLLNRAIQDIGMGRYQWQLFGVIGFGWASDNLWPIVTS LILVPVSYEFHVAQPPLLSLAQNIGLLAGSLFWGFTCDLFGRRWAFNLTIAITAIFGLVAAGSPSFAAVGVFAAL WSFGVGGNLPVDSAIFLEFLPGSHQYLLTVLSINWALAQLLANLVAWPLIGEMTCASADHCTKASNMGWRYFLIV MGGLALFMCLARCLFFTLYESPKYLMGKGRHEESVAVVHEVARRNGTSSSLSIDDLQDDGPISSSTETTTTPTRT SPNNEALSALDHLRMRLEPLSAPYVRALFRTPRRAWSTTLMILIWALVGLGFPLYNNFLPYLQQMRGIQFGDGST YITYRNSLIIAAVGVPGSLVGGVMVEMPRLGRKGTLCLATLSTGAFLLASTTATTSGGLLGWNCAYSFTSSLLYA VLYAYTPEIFETQYRGTGNALVAGANRIGGILAPIIALVSNMETAVPVYISGGMFVVAGLLVVLVPYETRGRMSL * |
| Coding | >Ani_SJS72_1|g5660.t1 ATGACGGGCGCATCCAAACCAAATGAGTCAGAGCCGGTATTATCGACGCTGGAAGGGGCATCGAACCCGCCGACG CCCAATGCTGCTGCTGCTGCCTATCGCTACAAGGCCGATCTGCTCAACCGCGCCATCCAAGACATCGGGATGGGC AGGTATCAGTGGCAGCTATTCGGCGTCATTGGATTCGGCTGGGCCAGCGACAATCTTTGGCCCATCGTCACCTCC CTCATTCTAGTCCCGGTGTCCTATGAATTCCACGTCGCCCAGCCACCGTTATTGTCCCTGGCCCAAAACATCGGC CTGCTGGCCGGTTCGCTCTTCTGGGGCTTCACCTGCGATCTGTTCGGTCGGCGATGGGCTTTCAACCTGACCATT GCCATCACCGCCATTTTCGGTCTGGTCGCTGCTGGCTCACCGTCTTTCGCAGCCGTAGGCGTCTTCGCCGCATTA TGGTCCTTCGGCGTTGGCGGCAACCTGCCCGTCGACTCGGCCATCTTCCTCGAGTTTCTCCCCGGATCGCACCAG TACCTGCTCACGGTGCTGTCGATCAACTGGGCGCTCGCGCAGCTCCTCGCCAACCTGGTCGCATGGCCTCTGATC GGAGAAATGACCTGCGCCTCCGCCGACCACTGCACCAAGGCCTCCAACATGGGATGGCGGTATTTCCTCATCGTG ATGGGCGGCCTCGCTCTCTTCATGTGCCTAGCCCGATGTCTATTTTTCACTCTTTACGAGTCTCCCAAGTACCTC ATGGGCAAGGGCCGTCACGAAGAATCCGTCGCCGTAGTGCATGAAGTCGCGCGACGCAACGGCACCAGCTCCTCT CTATCCATAGACGACCTCCAAGACGACGGGCCCATCTCCAGCAGCACCGAAACAACAACCACTCCCACCCGCACA TCACCCAACAACGAAGCCCTCAGCGCCCTTGACCATCTCCGCATGCGCCTCGAACCACTATCCGCCCCCTACGTG CGCGCCTTATTCCGTACCCCCCGCCGCGCCTGGTCCACGACCCTCATGATCCTCATCTGGGCCCTGGTCGGCCTC GGATTCCCCCTGTACAACAACTTCCTCCCCTACCTGCAGCAAATGCGCGGGATCCAATTCGGTGACGGTTCCACG TACATCACGTACCGCAACTCGCTCATCATCGCCGCAGTCGGCGTCCCCGGCAGCTTGGTCGGCGGAGTGATGGTC GAGATGCCTCGGTTAGGACGCAAGGGCACGCTCTGCCTCGCCACACTCTCCACGGGCGCATTCTTGCTCGCGTCC ACGACGGCGACTACCTCCGGTGGTCTACTAGGGTGGAACTGCGCCTACAGTTTCACTAGCAGTTTGCTGTATGCA GTGCTGTATGCATACACGCCGGAGATCTTTGAGACGCAGTACCGCGGCACCGGGAATGCGTTGGTCGCGGGTGCG AATCGGATTGGGGGTATCTTGGCGCCGATTATTGCTTTGGTGTCGAACATGGAGACGGCGGTGCCGGTGTATATT AGTGGGGGGATGTTTGTGGTGGCGGGGTTGTTGGTCGTGTTGGTGCCGTATGAGACGAGGGGGAGGATGAGTTTA TAG |
| Transcript | >Ani_SJS72_1|g5660.t1 ATGACGGGCGCATCCAAACCAAATGAGTCAGAGCCGGTATTATCGACGCTGGAAGGGGCATCGAACCCGCCGACG CCCAATGCTGCTGCTGCTGCCTATCGCTACAAGGCCGATCTGCTCAACCGCGCCATCCAAGACATCGGGATGGGC AGGTATCAGTGGCAGCTATTCGGCGTCATTGGATTCGGCTGGGCCAGCGACAATCTTTGGCCCATCGTCACCTCC CTCATTCTAGTCCCGGTGTCCTATGAATTCCACGTCGCCCAGCCACCGTTATTGTCCCTGGCCCAAAACATCGGC CTGCTGGCCGGTTCGCTCTTCTGGGGCTTCACCTGCGATCTGTTCGGTCGGCGATGGGCTTTCAACCTGACCATT GCCATCACCGCCATTTTCGGTCTGGTCGCTGCTGGCTCACCGTCTTTCGCAGCCGTAGGCGTCTTCGCCGCATTA TGGTCCTTCGGCGTTGGCGGCAACCTGCCCGTCGACTCGGCCATCTTCCTCGAGTTTCTCCCCGGATCGCACCAG TACCTGCTCACGGTGCTGTCGATCAACTGGGCGCTCGCGCAGCTCCTCGCCAACCTGGTCGCATGGCCTCTGATC GGAGAAATGACCTGCGCCTCCGCCGACCACTGCACCAAGGCCTCCAACATGGGATGGCGGTATTTCCTCATCGTG ATGGGCGGCCTCGCTCTCTTCATGTGCCTAGCCCGATGTCTATTTTTCACTCTTTACGAGTCTCCCAAGTACCTC ATGGGCAAGGGCCGTCACGAAGAATCCGTCGCCGTAGTGCATGAAGTCGCGCGACGCAACGGCACCAGCTCCTCT CTATCCATAGACGACCTCCAAGACGACGGGCCCATCTCCAGCAGCACCGAAACAACAACCACTCCCACCCGCACA TCACCCAACAACGAAGCCCTCAGCGCCCTTGACCATCTCCGCATGCGCCTCGAACCACTATCCGCCCCCTACGTG CGCGCCTTATTCCGTACCCCCCGCCGCGCCTGGTCCACGACCCTCATGATCCTCATCTGGGCCCTGGTCGGCCTC GGATTCCCCCTGTACAACAACTTCCTCCCCTACCTGCAGCAAATGCGCGGGATCCAATTCGGTGACGGTTCCACG TACATCACGTACCGCAACTCGCTCATCATCGCCGCAGTCGGCGTCCCCGGCAGCTTGGTCGGCGGAGTGATGGTC GAGATGCCTCGGTTAGGACGCAAGGGCACGCTCTGCCTCGCCACACTCTCCACGGGCGCATTCTTGCTCGCGTCC ACGACGGCGACTACCTCCGGTGGTCTACTAGGGTGGAACTGCGCCTACAGTTTCACTAGCAGTTTGCTGTATGCA GTGCTGTATGCATACACGCCGGAGATCTTTGAGACGCAGTACCGCGGCACCGGGAATGCGTTGGTCGCGGGTGCG AATCGGATTGGGGGTATCTTGGCGCCGATTATTGCTTTGGTGTCGAACATGGAGACGGCGGTGCCGGTGTATATT AGTGGGGGGATGTTTGTGGTGGCGGGGTTGTTGGTCGTGTTGGTGCCGTATGAGACGAGGGGGAGGATGAGTTTA TAG |
| Gene | >Ani_SJS72_1|g5660.t1 ATGACGGGCGCATCCAAACCAAATGAGTCAGAGCCGGTATTATCGACGCTGGAAGGGGCATCGAACCCGCCGACG CCCAATGCTGCTGCTGCTGCCTATCGCTACAAGGCCGATCTGCTCAACCGCGCCATCCAAGACATCGGGATGGGC AGGTATCAGTGGCAGCTATTCGGCGTCATTGGATTCGGCTGGGCCAGCGACAATCTTTGGCCCATCGTCACCTCC CTCATTCTAGTCCCGGTGTCCTATGAATTCCACGTCGCCCAGCCACCGTTATTGTCCCTGGCCCAAAACATCGGC CTGCTGGCCGGTTCGCTCTTCTGGGGCTTCACCTGCGATCTGTTCGGTCGGCGATGGGCTTTCAACCTGACCATT GCCATCACCGCCATTTTCGGTCTGGTCGCTGCTGGCTCACCGTCTTTCGCAGCCGTAGGCGTCTTCGCCGCATTA TGGTCCTTCGGCGTTGGCGGCAACCTGCCCGTCGACTCGGCCATCTTCCTCGAGTTTCTCCCCGGATCGCACCAG TACCTGCTCACGGTGCTGTCGATCAACTGGGCGCTCGCGCAGCTCCTCGCCAACCTGGTCGCATGGCCTCTGATC GGAGAAATGACCTGCGCCTCCGCCGACCACTGCACCAAGGCCTCCAACATGGGATGGCGGTATTTCCTCATCGTG ATGGGCGGCCTCGCTCTCTTCATGTGCCTAGCCCGATGTCTATTTTTCACTCTTTACGAGTCTCCCAAGTACCTC ATGGGCAAGGGCCGTCACGAAGAATCCGTCGCCGTAGTGCATGAAGTCGCGCGACGCAACGGCACCAGCTCCTCT CTATCCATAGACGACCTCCAAGACGACGGGCCCATCTCCAGCAGCACCGAAACAACAACCACTCCCACCCGCACA TCACCCAACAACGAAGCCCTCAGCGCCCTTGACCATCTCCGCATGCGCCTCGAACCACTATCCGCCCCCTACGTG CGCGCCTTATTCCGTACCCCCCGCCGCGCCTGGTCCACGACCCTCATGATCCTCATCTGGGCCCTGGTCGGCCTC GGATTCCCCCTGTACAACAACTTCCTCCCCTACCTGCAGCAAATGCGCGGGATCCAATTCGGTGACGGTTCCACG TACATCACGTACCGCAACTCGCTCATCATCGCCGCAGTCGGCGTCCCCGGCAGCTTGGTCGGCGGAGTGATGGTC GAGATGCCTCGGTTAGGACGCAAGGGCACGCTCTGCCTCGCCACACTCTCCACGGGCGCATTCTTGCTCGCGTCC ACGACGGCGACTACCTCCGGTGGTCTACTAGGGTGGAACTGCGCCTACAGTTTCACTAGCAGTTTGCTGTATGCA GTGCTGTATGCATACACGCCGGAGATCTTTGAGACGCAGTACCGCGGCACCGGGAATGCGTTGGTCGCGGGTGCG AATCGGATTGGGGGTATCTTGGCGCCGATTATTGCTTTGGTGTCGAACATGGAGACGGCGGTGCCGGTGTATATT AGTGGGGGGATGTTTGTGGTGGCGGGGTTGTTGGTCGTGTTGGTGCCGTATGAGACGAGGGGGAGGATGAGTTTA TAG |