Protein ID | Ani_SJS72_1|g5635.t1 |
Gene name | |
Location | scaffold_039:158197..160794 |
Strand | + |
Gene length (bp) | 2597 |
Transcript length (bp) | 1737 |
Coding sequence length (bp) | 1737 |
Protein length (aa) | 579 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF04479 | RTA1 | RTA1 like protein | 5.7E-48 | 349 | 533 |
PF08240 | ADH_N | Alcohol dehydrogenase GroES-like domain | 4.2E-19 | 34 | 163 |
PF00107 | ADH_zinc_N | Zinc-binding dehydrogenase | 8.0E-18 | 212 | 332 |
GO Term | Description | Terminal node |
---|---|---|
GO:0016021 | integral component of membrane | Yes |
GO:0031224 | intrinsic component of membrane | No |
GO:0110165 | cellular anatomical entity | No |
GO:0005575 | cellular_component | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 26 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 361 | 383 | 22 |
2 | 396 | 418 | 22 |
3 | 433 | 455 | 22 |
4 | 508 | 530 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS72_1|g5635.t1 MPPTQPPEHFHGYLSHSPTTPLTYARYTPKPFTPHDIEISITHCGICGTDLHTLRSGWGPNTTTYPCIVGHEIIG IVTRIGSSIPTSPAYPNTTPLQIGDRVGIGAQTLSCLQPSCEECVAGKENYCPRITGTYNSRYWDNETGKRSDVI AYGGFARKWRGPAAFAFRIPEGLKSEVAAPLLCAGTTVFAPLRKYLDGNGKGKTVAVVGIGGLGHLGIMFAKALG CERVIGISRSNMKREDAVKGLGADGFIATGEEKGWEKKWSRSVDLILCTVDGDDMPLGKYLRLLKAGGTFVLVGA PEKPLPRMRAFELIGKGVNVTGSNIGSREDIRCNRIHRPRHVGISVSPLDFGPYVMQSTLLLVAPALFAASIYME LCQIIALVKWGELAIIRVGWMTNIFVAGDMLSFLMQVSGAGIMVNGSRSMGQQIIVGGLIVQIAFFSFFVVSALV VLACIASRPAEESRYPLIPWRKHMFALYSSRVLIIVRSVCRVVEYIEGSDGFLLQHEVFIYVLDGLLALSVLIVF AAIHPREVEWLLERGSTKTEKEGRIKGAYLCIVGAVVACKCPVIESMNHEMVS* |
Coding | >Ani_SJS72_1|g5635.t1 ATGCCACCAACCCAACCCCCCGAACATTTCCACGGCTACCTCTCCCACTCCCCCACCACGCCCCTAACCTACGCC CGCTACACCCCCAAACCCTTCACTCCCCACGACATCGAAATCAGCATAACCCACTGCGGCATCTGCGGTACCGAC CTCCACACCCTCCGCTCAGGCTGGGGTCCCAACACAACAACCTACCCCTGCATCGTGGGCCACGAAATCATCGGC ATCGTGACACGAATCGGCTCCTCCATCCCCACCTCCCCAGCTTACCCCAACACCACACCACTCCAGATCGGAGAC CGAGTCGGCATCGGCGCCCAAACCCTCTCCTGCCTACAACCATCCTGTGAGGAGTGCGTCGCCGGAAAGGAGAAC TATTGTCCGCGCATCACGGGCACGTATAACAGCCGGTACTGGGACAACGAGACGGGCAAGAGAAGCGATGTTATA GCGTATGGAGGATTCGCGCGAAAGTGGCGCGGGCCTGCGGCATTCGCGTTCAGGATTCCGGAGGGATTGAAGAGT GAGGTTGCGGCGCCGTTGTTGTGTGCGGGGACGACGGTGTTTGCGCCGTTGAGGAAGTATCTGGATGGGAATGGG AAGGGGAAGACGGTAGCGGTGGTGGGGATAGGCGGGCTGGGGCATTTGGGGATTATGTTTGCGAAGGCGCTGGGC TGTGAGAGAGTCATTGGGATATCGAGGAGTAATATGAAGAGAGAGGATGCTGTGAAAGGGTTAGGGGCTGATGGG TTTATTGCGACTGGGGAGGAGAAAGGGTGGGAGAAGAAGTGGAGTCGATCGGTGGATTTGATTCTTTGTACGGTG GATGGGGATGATATGCCGTTGGGGAAGTATTTGAGGTTGTTGAAGGCCGGGGGCACGTTTGTGTTGGTGGGGGCG CCGGAGAAGCCGTTGCCCAGGATGAGGGCGTTCGAGTTGATTGGGAAGGGGGTTAATGTGACGGGGTCGAATATT GGGAGTCGTGAGGATATTAGGTGCAATAGGATACACCGGCCGCGCCATGTTGGCATCTCAGTCTCCCCACTGGAC TTCGGTCCGTACGTCATGCAGAGCACCTTGCTGCTGGTTGCACCGGCTCTCTTCGCTGCGAGCATATACATGGAG TTGTGTCAGATCATTGCCCTCGTGAAATGGGGAGAGTTGGCAATCATCCGGGTGGGCTGGATGACCAACATATTT GTTGCCGGAGATATGCTCAGCTTCTTGATGCAAGTGTCGGGGGCGGGAATCATGGTCAATGGCTCCCGGAGTATG GGACAACAAATCATCGTGGGTGGTCTGATCGTGCAGATTGCTTTCTTCAGTTTCTTTGTCGTGAGCGCGCTGGTT GTCCTGGCTTGCATAGCAAGTCGGCCAGCTGAGGAGTCGCGGTATCCCTTGATTCCCTGGAGGAAGCATATGTTC GCCTTGTACAGCTCGCGTGTTCTAATCATCGTCCGATCGGTCTGTCGTGTAGTCGAGTATATAGAGGGCTCGGAT GGGTTCCTCCTGCAGCATGAAGTGTTCATTTACGTGCTGGACGGACTGCTGGCGTTGTCCGTGTTGATCGTTTTC GCTGCTATCCATCCGAGAGAAGTGGAATGGCTTCTCGAGCGCGGGAGCACCAAGACAGAAAAGGAAGGACGAATC AAAGGAGCCTATCTCTGTATAGTTGGAGCTGTCGTCGCTTGTAAATGTCCAGTTATTGAATCAATGAATCACGAA ATGGTTTCCTGA |
Transcript | >Ani_SJS72_1|g5635.t1 ATGCCACCAACCCAACCCCCCGAACATTTCCACGGCTACCTCTCCCACTCCCCCACCACGCCCCTAACCTACGCC CGCTACACCCCCAAACCCTTCACTCCCCACGACATCGAAATCAGCATAACCCACTGCGGCATCTGCGGTACCGAC CTCCACACCCTCCGCTCAGGCTGGGGTCCCAACACAACAACCTACCCCTGCATCGTGGGCCACGAAATCATCGGC ATCGTGACACGAATCGGCTCCTCCATCCCCACCTCCCCAGCTTACCCCAACACCACACCACTCCAGATCGGAGAC CGAGTCGGCATCGGCGCCCAAACCCTCTCCTGCCTACAACCATCCTGTGAGGAGTGCGTCGCCGGAAAGGAGAAC TATTGTCCGCGCATCACGGGCACGTATAACAGCCGGTACTGGGACAACGAGACGGGCAAGAGAAGCGATGTTATA GCGTATGGAGGATTCGCGCGAAAGTGGCGCGGGCCTGCGGCATTCGCGTTCAGGATTCCGGAGGGATTGAAGAGT GAGGTTGCGGCGCCGTTGTTGTGTGCGGGGACGACGGTGTTTGCGCCGTTGAGGAAGTATCTGGATGGGAATGGG AAGGGGAAGACGGTAGCGGTGGTGGGGATAGGCGGGCTGGGGCATTTGGGGATTATGTTTGCGAAGGCGCTGGGC TGTGAGAGAGTCATTGGGATATCGAGGAGTAATATGAAGAGAGAGGATGCTGTGAAAGGGTTAGGGGCTGATGGG TTTATTGCGACTGGGGAGGAGAAAGGGTGGGAGAAGAAGTGGAGTCGATCGGTGGATTTGATTCTTTGTACGGTG GATGGGGATGATATGCCGTTGGGGAAGTATTTGAGGTTGTTGAAGGCCGGGGGCACGTTTGTGTTGGTGGGGGCG CCGGAGAAGCCGTTGCCCAGGATGAGGGCGTTCGAGTTGATTGGGAAGGGGGTTAATGTGACGGGGTCGAATATT GGGAGTCGTGAGGATATTAGGTGCAATAGGATACACCGGCCGCGCCATGTTGGCATCTCAGTCTCCCCACTGGAC TTCGGTCCGTACGTCATGCAGAGCACCTTGCTGCTGGTTGCACCGGCTCTCTTCGCTGCGAGCATATACATGGAG TTGTGTCAGATCATTGCCCTCGTGAAATGGGGAGAGTTGGCAATCATCCGGGTGGGCTGGATGACCAACATATTT GTTGCCGGAGATATGCTCAGCTTCTTGATGCAAGTGTCGGGGGCGGGAATCATGGTCAATGGCTCCCGGAGTATG GGACAACAAATCATCGTGGGTGGTCTGATCGTGCAGATTGCTTTCTTCAGTTTCTTTGTCGTGAGCGCGCTGGTT GTCCTGGCTTGCATAGCAAGTCGGCCAGCTGAGGAGTCGCGGTATCCCTTGATTCCCTGGAGGAAGCATATGTTC GCCTTGTACAGCTCGCGTGTTCTAATCATCGTCCGATCGGTCTGTCGTGTAGTCGAGTATATAGAGGGCTCGGAT GGGTTCCTCCTGCAGCATGAAGTGTTCATTTACGTGCTGGACGGACTGCTGGCGTTGTCCGTGTTGATCGTTTTC GCTGCTATCCATCCGAGAGAAGTGGAATGGCTTCTCGAGCGCGGGAGCACCAAGACAGAAAAGGAAGGACGAATC AAAGGAGCCTATCTCTGTATAGTTGGAGCTGTCGTCGCTTGTAAATGTCCAGTTATTGAATCAATGAATCACGAA ATGGTTTCCTGA |
Gene | >Ani_SJS72_1|g5635.t1 ATGCCACCAACCCAACCCCCCGAACATTTCCACGGCTACCTCTCCCACTCCCCCACCACGCCCCTAACCTACGCC CGCTACACCCCCAAACCCTTCACTCCCCACGACATCGAAATCAGCATAACCCACTGCGGCATCTGCGGTACCGAC CTCCACACCCTCCGCTCAGGCTGGGGTCCCAACACAACAACCTACCCCTGCATCGTGGGCCACGAAATCATCGGC ATCGTGACACGAATCGGCTCCTCCATCCCCACCTCCCCAGCTTACCCCAACACCACACCACTCCAGATCGGAGAC CGAGTCGGCATCGGCGCCCAAACCCTCTCCTGCCTACAACCATCCTGTGAGGAGTGCGTCGCCGGAAAGGAGAAC TATTGTCCGCGCATCACGGGCACGTATAACAGCCGGTACTGGGACAACGAGACGGGCAAGAGAAGCGATGTTATA GCGTATGGAGGATTCGCGCGAAAGTGGCGCGGGCCTGCGGCATTCGCGTTCAGGATTCCGGAGGGATTGAAGAGT GAGGTTGCGGCGCCGTTGTTGTGTGCGGGGACGACGGTGTTTGCGCCGTTGAGGAAGTATCTGGATGGGAATGGG AAGGGGAAGACGGTAGCGGTGGTGGGGATAGGCGGGCTGGGGCATTTGGGGATTATGTTTGCGAAGGCGCTGGGC TGTGAGAGAGTCATTGGGATATCGAGGAGTAATATGAAGAGAGAGGATGCTGTGAAAGGGTTAGGGGCTGATGGG TTTATTGCGACTGGGGAGGAGAAAGGGTGGGAGAAGAAGTGGAGTCGATCGGTGGATTTGATTCTTTGTACGGTG GATGGGGATGATATGCCGTTGGGGAAGTATTTGAGGTTGTTGAAGGCCGGGGGCACGTTTGTGTTGGTGGGGGCG CCGGAGAAGCCGTTGCCCAGGATGAGGGCGTTCGAGTTGATTGGGAAGGGGGTTAATGTGACGGGGTCGAATATT GGGAGTCGTGAGGATATTAGGTGTATGTTGGAGGTTGCGGCGGAGAAGGGGGTCGTGCCGTGGGTGGAGACGAGG AGGATGGAAGAGGTGAATGAGGCGTTGAGGGATATGGAGGAAGGGAGGGCGAGGTTTAGGTATGTTTTGGTGAAT GGGGAGGAGAGGGAGAGTCGGTTGTAGATTTATTGAGTGTGTTCAAAGTTGTTTGTTGGTGTATGTATGGGGTTG GGGCGTTGTATAGGGTGGGTGTGGTGGTGAGGGGGTCGTAGGGAAAGTGGATATATATAGACAACTGTAGTACTT ATGGGATGAGAGTCTCATTCAAGGGAGAAGTCCTGCATATATCAGTCATTTTCAAGAAATGTAAAAGGATGTTCA TCACTCCTGATACGCTCGGTCTGGATCCGCCGTGGGTATGACTGTATTTCCCAATCGGGAAACAGGTACGAGACA TACGAGGTTGCAGATCGTAAAGCCTCACATAGAAAAAATTTCTATACAGGACATGATGAGAGACGATCCTCTATA CAAATGGAAATTCTGTTCCAGAAAGGTAATTTGTTCTGTCTATCAACATACTGTTTTCATGCAGTGATAGACTTC ATGCCTACCAAACAAAATGTCTTAAAATTCGCATAGCGGCTGTGGCTTATCAATGCAATCTATTAATATCTGCAG CGATTGTATTCGCGGCTCTCTTTATGCTAGCAACCCTCTTTCATACCTATCGTCTGCTCCGGACATGGATGAGGT TTTCAACCCATCTCGTCATTGGAAGCTACTGTATGCCAACCATTTCAATGTTGAAATATCACTGACCAACCGGTC GAGGCAATAGGATACACCGGCCGCGCCATGTTGGCATCTCAGTCTCCCCACTGGACTTCGGTCCGTACGTCATGC AGAGCACCTTGCTGCTGGTTGCACCGGCTCTCTTCGCTGCGAGCATATACATGGAGTTGTGTCAGATCATTGCCC TCGTGAAATGGGGAGAGTTGGCAATCATCCGGGTGGGCTGGATGACCAACATATTTGTTGCCGGAGATATGCTCA GCTTCTTGATGCAAGTGTCGGGTGAGTGCGTGCTGTGCCTAGGTGATGTTGTGTGATGTGCTAATGTGGATACAG GGGCGGGAATCATGGTCAATGGCTCCCGGAGTATGGGACAACAAATCATCGTGGGTGGTCTGATCGTGCAGATTG CTTTCTTCAGTTTCTTTGTCGTGAGCGCGCTGGTTGTCCTGGCTTGCATAGCAAGTCGGCCAGCTGAGGAGTCGC GGTATCCCTTGATTCCCTGGAGGAAGCATATGTTCGCCTTGTACAGCTCGCGTGTTCTAATCATCGTCCGATCGG TCTGTCGTGTAGTCGAGTATATAGAGGGCTCGGATGGGTTCCTCCTGCAGCATGAAGTGTTCATTTACGTGCTGG ACGGACTGCTGGCGTTGTCCGTGTTGATCGTTTTCGCTGCTATCCATCCGAGAGAAGTGGAATGGCTTCTCGAGC GCGGGAGCACCAAGACAGAAAAGGAAGGACGAATCAAAGGAGCCTATCTCTGTATAGTTGGAGCTGTCGTCGCTT GTAAATGTCCAGTTATTGAATCAATGAATCACGAAATGGTTTCCTGA |