Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS72_1|g5532.t1
Gene name
Locationscaffold_038:146850..147428
Strand-
Gene length (bp)578
Transcript length (bp)405
Coding sequence length (bp)405
Protein length (aa) 135

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04749 PLAC8 PLAC8 family 3.4E-24 7 108

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 23 0.5

Transmembrane Domains

Domain # Start End Length
1 48 70 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS72_1|g5532.t1
MGEGQEWSSSFWDCCSPCGTCSLAFCCPCCLHGRTSSRLEDPTLKDDSMMNGGCCVYFLLAYCGFHFIPLMMKRG
QIRERFGLEGSGCGDCMRSFCCPCCTLMQHEKELESRAALLEGPGAQQGYKAPAGMAYQ*
Coding >Ani_SJS72_1|g5532.t1
ATGGGTGAAGGTCAAGAATGGTCCTCCAGCTTCTGGGACTGCTGCTCCCCCTGCGGCACCTGCTCCCTCGCCTTC
TGCTGCCCCTGCTGCCTCCACGGCCGCACCAGTTCTCGTCTCGAAGACCCCACCCTGAAAGACGATAGCATGATG
AACGGTGGTTGCTGCGTTTACTTCCTTCTCGCTTACTGCGGCTTCCACTTCATCCCATTGATGATGAAGCGCGGC
CAAATCAGAGAGAGATTCGGGCTTGAGGGGTCCGGATGCGGGGACTGTATGCGGTCGTTCTGCTGCCCGTGCTGC
ACGCTCATGCAGCATGAGAAGGAATTGGAGAGTCGGGCGGCGTTGTTGGAGGGGCCTGGTGCGCAGCAGGGATAT
AAGGCTCCCGCGGGGATGGCGTATCAGTGA
Transcript >Ani_SJS72_1|g5532.t1
ATGGGTGAAGGTCAAGAATGGTCCTCCAGCTTCTGGGACTGCTGCTCCCCCTGCGGCACCTGCTCCCTCGCCTTC
TGCTGCCCCTGCTGCCTCCACGGCCGCACCAGTTCTCGTCTCGAAGACCCCACCCTGAAAGACGATAGCATGATG
AACGGTGGTTGCTGCGTTTACTTCCTTCTCGCTTACTGCGGCTTCCACTTCATCCCATTGATGATGAAGCGCGGC
CAAATCAGAGAGAGATTCGGGCTTGAGGGGTCCGGATGCGGGGACTGTATGCGGTCGTTCTGCTGCCCGTGCTGC
ACGCTCATGCAGCATGAGAAGGAATTGGAGAGTCGGGCGGCGTTGTTGGAGGGGCCTGGTGCGCAGCAGGGATAT
AAGGCTCCCGCGGGGATGGCGTATCAGTGA
Gene >Ani_SJS72_1|g5532.t1
ATGGGTGAAGGTCAAGAATGGTCCTCCAGCTTCTGGGACTGCTGCTCCCCCTGCGGCACCTGTACGTCTCCCTCC
CCCTCCCTCCCCTCTCAACAACCCCCAATTACCCCCAAAACTAACCAAATATACTTACACAATGAACAGGCTCCC
TCGCCTTCTGCTGCCCCTGCTGCCTCCACGGCCGCACCAGTTCTCGTCTCGAAGACCCCACCCTGAAAGACGATA
GCATGATGAACGGTGGTGTACGTCCCCTATCCCTAATACTATACAGCCAAACCCATCCTTCCTCCTATAACAACC
AATTTGATACTAATACTGATAATGTAATACAGTGCTGCGTTTACTTCCTTCTCGCTTACTGCGGCTTCCACTTCA
TCCCATTGATGATGAAGCGCGGCCAAATCAGAGAGAGATTCGGGCTTGAGGGGTCCGGATGCGGGGACTGTATGC
GGTCGTTCTGCTGCCCGTGCTGCACGCTCATGCAGCATGAGAAGGAATTGGAGAGTCGGGCGGCGTTGTTGGAGG
GGCCTGGTGCGCAGCAGGGATATAAGGCTCCCGCGGGGATGGCGTATCAGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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