© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g5478.t1 |
| Gene name | |
| Location | scaffold_037:273094..274279 |
| Strand | + |
| Gene length (bp) | 1185 |
| Transcript length (bp) | 873 |
| Coding sequence length (bp) | 873 |
| Protein length (aa) | 291 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF12326 | EOS1 | N-glycosylation protein | 1.8E-12 | 132 | 214 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0005789 | endoplasmic reticulum membrane | Yes |
| GO:0034599 | cellular response to oxidative stress | Yes |
| GO:0009987 | cellular process | No |
| GO:0042221 | response to chemical | No |
| GO:0006979 | response to oxidative stress | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005575 | cellular_component | No |
| GO:0016020 | membrane | No |
| GO:0062197 | cellular response to chemical stress | No |
| GO:0031090 | organelle membrane | No |
| GO:0050896 | response to stimulus | No |
| GO:0051716 | cellular response to stimulus | No |
| GO:0006950 | response to stress | No |
| GO:0033554 | cellular response to stress | No |
| GO:0008150 | biological_process | No |
| GO:0070887 | cellular response to chemical stimulus | No |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 133 | 150 | 17 |
| 2 | 166 | 188 | 22 |
| 3 | 198 | 215 | 17 |
| 4 | 228 | 250 | 22 |
| Orthofinder run ID | 3 |
| Orthogroup | 8297 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g5478.t1 MLLLHPSRLMPVDSNDKAVAPSSAPSTVVPPSPASSASPTPSINDAGHSAPSALHPRVAVILGVDRKWYLPLLIC RALSTVPAAWWGLRCAFTFLAELLHIRPGVGHEGWAAAIVGSVSQDWDVERRFRVTEVALAIMWCSASAYLSYFF ADCMMSRWLLNYTPPAVVIRLLTTNGLIAYITSWVLYLSGASSDPRLLLPAWISITTTLTFLYHATQNHATIKRE TAAALLVVAVASFVSMSSLLLQLHLTRENEPEVPVFVITRKLWDWAVAIFLRMRVSDERAAVGEL* |
| Coding | >Ani_SJS72_1|g5478.t1 ATGCTGCTTCTCCATCCTTCTCGTCTCATGCCCGTGGATTCCAACGATAAAGCCGTGGCCCCCTCCTCCGCCCCT TCGACTGTCGTCCCGCCCTCCCCGGCCTCCTCCGCGTCCCCCACTCCTAGTATCAACGATGCTGGTCATTCGGCC CCTTCTGCCCTTCATCCCCGGGTGGCCGTCATTCTAGGAGTTGATCGGAAATGGTATTTGCCTTTACTGATCTGT CGCGCGCTGAGCACTGTGCCTGCCGCGTGGTGGGGGCTCCGATGTGCCTTCACCTTCCTGGCCGAACTGCTGCAT ATTCGACCAGGCGTGGGACATGAGGGGTGGGCGGCGGCGATTGTCGGGAGTGTTAGTCAAGACTGGGATGTTGAA AGACGATTCCGGGTAACAGAGGTGGCCTTGGCTATTATGTGGTGCAGTGCATCCGCGTATCTTTCTTACTTTTTT GCTGATTGTATGATGTCTCGATGGCTTTTGAACTATACCCCACCAGCTGTTGTTATTCGTCTCCTTACTACAAAC GGTTTGATTGCTTATATCACTTCTTGGGTCCTCTACCTCTCTGGAGCTTCGTCCGACCCCCGTCTTCTTTTACCA GCCTGGATATCCATTACCACTACCCTTACCTTCCTTTACCATGCCACCCAGAACCATGCTACAATCAAGCGTGAA ACTGCAGCTGCGCTTCTCGTTGTGGCCGTGGCTAGTTTCGTCAGCATGTCATCGCTTCTCCTCCAGTTGCATCTG ACCCGTGAAAATGAGCCCGAAGTGCCCGTGTTTGTCATTACTCGCAAGCTTTGGGACTGGGCTGTGGCTATCTTC CTTCGTATGCGAGTGTCAGACGAGCGAGCTGCAGTCGGCGAATTGTAA |
| Transcript | >Ani_SJS72_1|g5478.t1 ATGCTGCTTCTCCATCCTTCTCGTCTCATGCCCGTGGATTCCAACGATAAAGCCGTGGCCCCCTCCTCCGCCCCT TCGACTGTCGTCCCGCCCTCCCCGGCCTCCTCCGCGTCCCCCACTCCTAGTATCAACGATGCTGGTCATTCGGCC CCTTCTGCCCTTCATCCCCGGGTGGCCGTCATTCTAGGAGTTGATCGGAAATGGTATTTGCCTTTACTGATCTGT CGCGCGCTGAGCACTGTGCCTGCCGCGTGGTGGGGGCTCCGATGTGCCTTCACCTTCCTGGCCGAACTGCTGCAT ATTCGACCAGGCGTGGGACATGAGGGGTGGGCGGCGGCGATTGTCGGGAGTGTTAGTCAAGACTGGGATGTTGAA AGACGATTCCGGGTAACAGAGGTGGCCTTGGCTATTATGTGGTGCAGTGCATCCGCGTATCTTTCTTACTTTTTT GCTGATTGTATGATGTCTCGATGGCTTTTGAACTATACCCCACCAGCTGTTGTTATTCGTCTCCTTACTACAAAC GGTTTGATTGCTTATATCACTTCTTGGGTCCTCTACCTCTCTGGAGCTTCGTCCGACCCCCGTCTTCTTTTACCA GCCTGGATATCCATTACCACTACCCTTACCTTCCTTTACCATGCCACCCAGAACCATGCTACAATCAAGCGTGAA ACTGCAGCTGCGCTTCTCGTTGTGGCCGTGGCTAGTTTCGTCAGCATGTCATCGCTTCTCCTCCAGTTGCATCTG ACCCGTGAAAATGAGCCCGAAGTGCCCGTGTTTGTCATTACTCGCAAGCTTTGGGACTGGGCTGTGGCTATCTTC CTTCGTATGCGAGTGTCAGACGAGCGAGCTGCAGTCGGCGAATTGTAA |
| Gene | >Ani_SJS72_1|g5478.t1 ATGCTGCTTCTCCATCCTTCTCGTCTCATGCCCGGTCGTCTTCTCCTGAACCTGACTTGATTGCTTCGCTGTCGG ATTCCATTCCCACGACCCCCAACTCACCATTTTATACTACTCTGGCTTCCATACTCTCAAAAGTGGATTCCAACG ATAAAGCCGTGGCCCCCTCCTCCGCCCCTTCGACTGTCGTCCCGCCCTCCCCGGCCTCCTCCGCGTCCCCCACTC CTAGTATCAACGATGCTGGTCATTCGGCCCCTTCTGCCCTTCATCCCCGGGTGGCCGTCATTCTAGGAGTTGATC GGAAATGGTATTTGCCTTTACTGATCTGTCGCGCGCTGAGCACTGTGCCTGCCGCGTGGTGGGGGCTCCGATGTG CCTTCACCTTCCTGGCCGAACTGCTGCATATTCGACCAGGCGTGGGACATGAGGGGTGGGCGGCGGCGATTGTCG GGAGTGTTAGTCAAGACTGGGATGTTGAAAGACGATTCCGGGTAACAGAGGTGGCCTTGGCTATTATGTGGGTAT GTGAATGCCCTATCTCCTTTTCTTTGCACATGCTCGTCTGCGAACAGGTCTAACTATGATTATAGTGCAGTGCAT CCGCGTATCTTTCTTACTTTTTTGCTGATTGTATGATGTCTCGATGGTACGCTTTCCCTGATCCTCTAAATTGAC GAGATTATCGCTAACATGCCCAGGCTTTTGAACTATACCCCACCAGCTGTTGTTATTCGTCTCCTTACTACAAAC GGTTTGATTGCTTATATCACTTCTTGGGTCCTCTACCTCTCTGGAGCTTCGTCCGACCCCCGTCTTCTTTTACCA GCCTGGATATCCATTACCACTGTAAGCTTCCCGGATTTCCCTCAATGCATAATTACCCTCGATTATCGGAAAGTC TGAAACTAACTTCCCCCCTTTCTTCCACATTAGACCCTTACCTTCCTTTACCATGCCACCCAGAACCATGCTACA ATCAAGCGTGAAACTGCAGCTGCGCTTCTCGTTGTGGCCGTGGCTAGTTTCGTCAGCATGTCATCGCTTCTCCTC CAGTTGCATCTGACCCGTGAAAATGAGCCCGAAGTGCCCGTGTTTGTCATTACTCGCAAGCTTTGGGACTGGGCT GTGGCTATCTTCCTTCGTATGCGAGTGTCAGACGAGCGAGCTGCAGTCGGCGAATTGTAA |