© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g5459.t1 |
| Gene name | |
| Location | scaffold_037:227434..230513 |
| Strand | - |
| Gene length (bp) | 3079 |
| Transcript length (bp) | 2835 |
| Coding sequence length (bp) | 2835 |
| Protein length (aa) | 945 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF02366 | PMT | Dolichyl-phosphate-mannose-protein mannosyltransferase | 2.4E-82 | 64 | 312 |
| PF16192 | PMT_4TMC | C-terminal four TMM region of protein-O-mannosyltransferase | 6.4E-68 | 559 | 757 |
| PF02815 | MIR | MIR domain | 3.7E-46 | 360 | 535 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0000030 | mannosyltransferase activity | Yes |
| GO:0016020 | membrane | Yes |
| GO:0006493 | protein O-linked glycosylation | Yes |
| GO:0071704 | organic substance metabolic process | No |
| GO:0008150 | biological_process | No |
| GO:0008152 | metabolic process | No |
| GO:0043412 | macromolecule modification | No |
| GO:0016758 | hexosyltransferase activity | No |
| GO:0006486 | protein glycosylation | No |
| GO:0043413 | macromolecule glycosylation | No |
| GO:0019538 | protein metabolic process | No |
| GO:0003674 | molecular_function | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0016757 | glycosyltransferase activity | No |
| GO:0005575 | cellular_component | No |
| GO:1901564 | organonitrogen compound metabolic process | No |
| GO:0036211 | protein modification process | No |
| GO:0003824 | catalytic activity | No |
| GO:0016740 | transferase activity | No |
| GO:0044238 | primary metabolic process | No |
| GO:0070085 | glycosylation | No |
| GO:0043170 | macromolecule metabolic process | No |
| GO:0006807 | nitrogen compound metabolic process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 34 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 102 | 124 | 22 |
| 2 | 144 | 166 | 22 |
| 3 | 173 | 190 | 17 |
| 4 | 195 | 217 | 22 |
| 5 | 230 | 247 | 17 |
| 6 | 251 | 273 | 22 |
| 7 | 286 | 308 | 22 |
| 8 | 613 | 635 | 22 |
| 9 | 656 | 678 | 22 |
| 10 | 718 | 740 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g5459.t1 MATKSKDTLAVTPPPKSSSRSPSRSPGPKSRKKAAAASSSYASDGVTDNNIFYLPSSDYKTLALVTIVAAVVRLF RIYQPSSVVFDEVHFGGFATKYIKGRFFMDVHPPLAKLLITLAGWLAGFDGEFDFKDIGKDYLEPGVPYVAMRML PAILGVLTIPLMFLTLRASGCRTITAVLGAGVVIFENGLITQSRLILLDSPLVFFTALTALSFTCFTNQQELGPS HSFRGPWWFWLVATGLSLGATLSVKWVGLFTVAWVGSLTVLQLWVLLGDPKNVTPRLWFKHFFARVFCLIVIPLS FYCAMFGIHFLCLVNPGDGDGFMSSEFQATLNSKGMQDVPADVAFGSRVSIRHLNTQGGYLHSHNHMYPTGSKQQ QITLYPHKDENNIFVLENQTQPLGPYGTVEGPLAWDNITAEYIEDGAVIRLNHLITRRRIHSHDERPPVTDVDWQ FEVSAYGYDGFPGDANDLFRVEIVKSLSEGEEAKKRLRTIQTKFRLVHIMTNCVLFSHKVKLPEWGFDQQEVTCA RGATLPNSIWYIESNSHPMLADDVEKVNYKNPGFFGKFWELQKVMWITNAGLTESHAWDSRPPSWPTLLRGINFW GKDHRQVYLLGNPFIWWSSTVAIVIYIIFKGVSVLRWQRSCGDYHNVNFKRFDYEIGTSVLGWAFHYFPFYLMAR QLFLHHYFPALYFAIIALCQEFDFLANRIKSLGIPSRPVIGKVLAGIFLAISIFTFTLYSPLVYGNPWTQDACNS VKLMDSWDFDCHTFYTSLDQYVTQIVDTHAAIPTTQTSVQQVPPVVMEQPPQQQVPQQVQQQNQEVLQEEAQEPG VTPRARHTAKARVEYRDQHGNVLDEELVAQLKKEGKVQFESRHETKTRLENGRIVDMIDGQIAPPHPDVEGQNPE TVGRQPPQAVEDGPASVAGQGSSQEQRGSPDPKPASEANEATKS* |
| Coding | >Ani_SJS72_1|g5459.t1 ATGGCAACCAAATCCAAAGATACCTTGGCGGTTACGCCGCCGCCAAAATCATCCTCACGCTCTCCCAGCCGCTCT CCGGGTCCCAAGAGCCGCAAGAAGGCCGCCGCGGCCTCCTCGAGCTATGCATCCGATGGCGTTACGGACAACAAT ATCTTCTATCTTCCCTCCTCCGACTATAAAACCCTAGCTCTGGTGACCATTGTTGCGGCGGTGGTCCGGTTGTTC AGGATCTACCAGCCTTCTAGCGTTGTCTTCGACGAAGTCCACTTCGGAGGTTTTGCGACAAAGTACATCAAGGGC CGCTTCTTCATGGATGTCCATCCTCCTCTTGCCAAGTTGCTCATCACACTTGCTGGCTGGCTGGCGGGCTTTGAT GGCGAATTCGATTTCAAGGACATTGGAAAGGATTATCTCGAACCGGGCGTACCATATGTTGCCATGCGCATGCTT CCGGCGATTTTGGGTGTTCTCACGATCCCATTGATGTTTCTGACATTGAGGGCATCGGGATGCCGCACTATTACT GCGGTGCTAGGTGCCGGTGTCGTCATCTTTGAGAACGGTCTCATTACTCAGTCTCGTTTAATTCTCTTGGATTCC CCATTGGTGTTCTTCACTGCGCTCACCGCATTGTCTTTCACGTGCTTTACCAACCAACAGGAATTGGGACCTTCT CATTCCTTCCGTGGACCCTGGTGGTTCTGGCTCGTGGCAACTGGCCTCTCTCTGGGCGCTACTCTCAGCGTCAAA TGGGTTGGACTCTTCACCGTTGCTTGGGTTGGGTCGCTTACTGTTCTCCAACTGTGGGTGCTGCTTGGCGATCCG AAGAATGTCACACCGCGCCTGTGGTTCAAGCACTTCTTTGCTCGTGTCTTCTGCCTGATTGTTATTCCCCTCAGC TTCTACTGCGCCATGTTTGGAATCCACTTCCTGTGCCTTGTCAACCCCGGCGATGGAGATGGATTCATGTCCTCC GAGTTCCAAGCAACCCTGAACTCCAAGGGGATGCAGGACGTTCCCGCCGATGTTGCATTTGGTTCCCGCGTCAGC ATCCGTCACCTCAACACCCAAGGAGGCTATCTTCATTCTCACAATCACATGTACCCCACGGGAAGCAAGCAGCAG CAGATAACGCTCTACCCCCACAAGGATGAGAACAACATTTTCGTCCTTGAGAACCAGACTCAGCCTCTTGGTCCC TACGGAACAGTGGAGGGCCCCTTGGCCTGGGACAACATCACCGCAGAGTATATCGAAGACGGAGCTGTGATCAGG TTGAATCACCTTATCACTCGGAGGCGAATTCACTCGCATGATGAGCGGCCTCCTGTCACAGATGTGGATTGGCAA TTCGAGGTGTCTGCCTATGGATACGACGGATTCCCGGGAGATGCAAACGATCTCTTCCGTGTTGAAATTGTGAAA TCTCTGTCTGAGGGTGAGGAGGCGAAGAAGCGACTGCGGACTATCCAGACCAAGTTCCGTCTGGTGCACATCATG ACTAACTGTGTCTTGTTTTCCCACAAAGTCAAGCTTCCCGAGTGGGGTTTCGACCAGCAAGAGGTGACCTGTGCC AGAGGAGCTACTTTGCCCAACAGCATCTGGTATATTGAGTCGAACAGCCACCCTATGCTCGCAGACGATGTTGAA AAGGTCAACTACAAGAACCCCGGTTTCTTCGGCAAGTTCTGGGAGCTGCAGAAGGTGATGTGGATTACCAACGCG GGCCTAACTGAATCGCACGCTTGGGACTCTCGCCCGCCTTCCTGGCCAACCCTCCTCCGTGGCATCAACTTCTGG GGCAAGGATCACCGCCAAGTCTACCTCCTGGGCAACCCCTTCATCTGGTGGTCTTCAACCGTGGCCATCGTTATC TACATTATTTTCAAGGGAGTCTCTGTTCTTCGCTGGCAGCGGAGCTGTGGTGACTACCACAACGTGAACTTCAAG CGGTTCGACTACGAAATTGGTACCAGCGTACTTGGCTGGGCTTTCCACTACTTCCCCTTCTACCTCATGGCGCGA CAGCTCTTCCTGCACCATTATTTCCCTGCCCTCTATTTCGCTATCATCGCCCTCTGTCAGGAATTCGACTTCCTT GCCAACCGTATTAAGAGTCTTGGGATACCATCTCGCCCTGTTATCGGCAAAGTGTTGGCCGGTATCTTCCTTGCG ATTAGCATCTTTACTTTCACACTGTACTCGCCTCTGGTCTACGGCAACCCCTGGACACAGGACGCTTGCAACAGT GTAAAGCTCATGGACAGCTGGGACTTTGACTGCCACACATTCTACACTAGCCTTGACCAGTATGTGACCCAAATT GTGGACACCCACGCGGCCATCCCCACGACTCAGACATCGGTACAACAAGTACCCCCCGTTGTGATGGAACAACCA CCGCAGCAGCAGGTCCCGCAGCAGGTCCAGCAACAGAACCAGGAAGTCCTGCAGGAGGAGGCCCAGGAACCGGGT GTCACGCCCCGGGCTCGGCACACTGCCAAGGCCCGTGTGGAATACCGTGATCAACACGGAAACGTGCTGGACGAA GAACTTGTTGCTCAGTTAAAGAAGGAAGGTAAGGTCCAGTTCGAGAGCCGTCATGAGACGAAGACTCGCCTGGAG AACGGCCGCATTGTCGACATGATCGACGGTCAAATCGCCCCGCCTCACCCCGACGTTGAAGGTCAGAACCCTGAA ACTGTTGGAAGACAGCCACCTCAGGCTGTAGAGGACGGCCCAGCCTCAGTAGCCGGGCAAGGAAGCTCCCAGGAG CAGCGCGGCTCGCCTGACCCCAAGCCGGCCAGTGAGGCCAATGAGGCTACCAAATCTTGA |
| Transcript | >Ani_SJS72_1|g5459.t1 ATGGCAACCAAATCCAAAGATACCTTGGCGGTTACGCCGCCGCCAAAATCATCCTCACGCTCTCCCAGCCGCTCT CCGGGTCCCAAGAGCCGCAAGAAGGCCGCCGCGGCCTCCTCGAGCTATGCATCCGATGGCGTTACGGACAACAAT ATCTTCTATCTTCCCTCCTCCGACTATAAAACCCTAGCTCTGGTGACCATTGTTGCGGCGGTGGTCCGGTTGTTC AGGATCTACCAGCCTTCTAGCGTTGTCTTCGACGAAGTCCACTTCGGAGGTTTTGCGACAAAGTACATCAAGGGC CGCTTCTTCATGGATGTCCATCCTCCTCTTGCCAAGTTGCTCATCACACTTGCTGGCTGGCTGGCGGGCTTTGAT GGCGAATTCGATTTCAAGGACATTGGAAAGGATTATCTCGAACCGGGCGTACCATATGTTGCCATGCGCATGCTT CCGGCGATTTTGGGTGTTCTCACGATCCCATTGATGTTTCTGACATTGAGGGCATCGGGATGCCGCACTATTACT GCGGTGCTAGGTGCCGGTGTCGTCATCTTTGAGAACGGTCTCATTACTCAGTCTCGTTTAATTCTCTTGGATTCC CCATTGGTGTTCTTCACTGCGCTCACCGCATTGTCTTTCACGTGCTTTACCAACCAACAGGAATTGGGACCTTCT CATTCCTTCCGTGGACCCTGGTGGTTCTGGCTCGTGGCAACTGGCCTCTCTCTGGGCGCTACTCTCAGCGTCAAA TGGGTTGGACTCTTCACCGTTGCTTGGGTTGGGTCGCTTACTGTTCTCCAACTGTGGGTGCTGCTTGGCGATCCG AAGAATGTCACACCGCGCCTGTGGTTCAAGCACTTCTTTGCTCGTGTCTTCTGCCTGATTGTTATTCCCCTCAGC TTCTACTGCGCCATGTTTGGAATCCACTTCCTGTGCCTTGTCAACCCCGGCGATGGAGATGGATTCATGTCCTCC GAGTTCCAAGCAACCCTGAACTCCAAGGGGATGCAGGACGTTCCCGCCGATGTTGCATTTGGTTCCCGCGTCAGC ATCCGTCACCTCAACACCCAAGGAGGCTATCTTCATTCTCACAATCACATGTACCCCACGGGAAGCAAGCAGCAG CAGATAACGCTCTACCCCCACAAGGATGAGAACAACATTTTCGTCCTTGAGAACCAGACTCAGCCTCTTGGTCCC TACGGAACAGTGGAGGGCCCCTTGGCCTGGGACAACATCACCGCAGAGTATATCGAAGACGGAGCTGTGATCAGG TTGAATCACCTTATCACTCGGAGGCGAATTCACTCGCATGATGAGCGGCCTCCTGTCACAGATGTGGATTGGCAA TTCGAGGTGTCTGCCTATGGATACGACGGATTCCCGGGAGATGCAAACGATCTCTTCCGTGTTGAAATTGTGAAA TCTCTGTCTGAGGGTGAGGAGGCGAAGAAGCGACTGCGGACTATCCAGACCAAGTTCCGTCTGGTGCACATCATG ACTAACTGTGTCTTGTTTTCCCACAAAGTCAAGCTTCCCGAGTGGGGTTTCGACCAGCAAGAGGTGACCTGTGCC AGAGGAGCTACTTTGCCCAACAGCATCTGGTATATTGAGTCGAACAGCCACCCTATGCTCGCAGACGATGTTGAA AAGGTCAACTACAAGAACCCCGGTTTCTTCGGCAAGTTCTGGGAGCTGCAGAAGGTGATGTGGATTACCAACGCG GGCCTAACTGAATCGCACGCTTGGGACTCTCGCCCGCCTTCCTGGCCAACCCTCCTCCGTGGCATCAACTTCTGG GGCAAGGATCACCGCCAAGTCTACCTCCTGGGCAACCCCTTCATCTGGTGGTCTTCAACCGTGGCCATCGTTATC TACATTATTTTCAAGGGAGTCTCTGTTCTTCGCTGGCAGCGGAGCTGTGGTGACTACCACAACGTGAACTTCAAG CGGTTCGACTACGAAATTGGTACCAGCGTACTTGGCTGGGCTTTCCACTACTTCCCCTTCTACCTCATGGCGCGA CAGCTCTTCCTGCACCATTATTTCCCTGCCCTCTATTTCGCTATCATCGCCCTCTGTCAGGAATTCGACTTCCTT GCCAACCGTATTAAGAGTCTTGGGATACCATCTCGCCCTGTTATCGGCAAAGTGTTGGCCGGTATCTTCCTTGCG ATTAGCATCTTTACTTTCACACTGTACTCGCCTCTGGTCTACGGCAACCCCTGGACACAGGACGCTTGCAACAGT GTAAAGCTCATGGACAGCTGGGACTTTGACTGCCACACATTCTACACTAGCCTTGACCAGTATGTGACCCAAATT GTGGACACCCACGCGGCCATCCCCACGACTCAGACATCGGTACAACAAGTACCCCCCGTTGTGATGGAACAACCA CCGCAGCAGCAGGTCCCGCAGCAGGTCCAGCAACAGAACCAGGAAGTCCTGCAGGAGGAGGCCCAGGAACCGGGT GTCACGCCCCGGGCTCGGCACACTGCCAAGGCCCGTGTGGAATACCGTGATCAACACGGAAACGTGCTGGACGAA GAACTTGTTGCTCAGTTAAAGAAGGAAGGTAAGGTCCAGTTCGAGAGCCGTCATGAGACGAAGACTCGCCTGGAG AACGGCCGCATTGTCGACATGATCGACGGTCAAATCGCCCCGCCTCACCCCGACGTTGAAGGTCAGAACCCTGAA ACTGTTGGAAGACAGCCACCTCAGGCTGTAGAGGACGGCCCAGCCTCAGTAGCCGGGCAAGGAAGCTCCCAGGAG CAGCGCGGCTCGCCTGACCCCAAGCCGGCCAGTGAGGCCAATGAGGCTACCAAATCTTGA |
| Gene | >Ani_SJS72_1|g5459.t1 ATGGCAACCAAATCCAAAGATACCTTGGCGGTTACGCCGCCGCCAAAATCATCCTCACGCTCTCCCAGCCGCTCT CCGGGTCCCAAGAGCCGCAAGAAGGCCGCCGCGGCCTCCTCGAGCTATGCATCCGATGGCGTTACGGACAACAAT ATCTTCTATCTTCCCTCCTCCGACTATAAAACCCTAGCTCTGGTGACCATTGTTGCGGCGGTGGTCCGGTTGTTC AGGATCTACCAGCCTTCTAGCGTTGTCTTCGACGAAGTCCAGTACGTGTGCATACCTTTTTCCGCCCCCGCATAT GCCGGAGATAATCTTGTTCTAATGCATGGCGGACAGCTTCGGAGGTTTTGCGACAAAGTACATCAAGGGCCGCTT CTTCATGGATGTCCATCCTCCTCTTGCCAAGTTGCTCATCACACTTGCTGGCTGGCTGGCGGGCTTTGATGGCGA ATTCGATTTCAAGGACATTGGAAAGGATTATCTCGAACCGGGCGTACCATATGTTGCCATGCGCATGCTTCCGGC GATTTTGGGTGTTCTCACGATCCCATTGATGTTTCTGACATTGAGGGCATCGGGATGCCGCACTATTACTGCGGT GCTAGGTGCCGGTGTCGTCATCTTTGGTATGCCTCCACGCCTCTCCGACTGGTCAATTGCACAAGCTGATTCAAA GCAGAGAACGGTCTCATTACTCAGTCTCGTTTAATTCTCTTGGATTCCCCATTGGTGTTCTTCACTGCGCTCACC GCATTGTCTTTCACGTGCTTTACCAACCAACAGGAATTGGGACCTTCTCATTCCTTCCGTGGACCCTGGTGGTTC TGGCTCGTGGCAACTGGCCTCTCTCTGGGCGCTACTCTCAGCGTCAAATGGGTTGGACTCTTCACCGTTGCTTGG GTTGGGTCGCTTACTGTTCTCCAACTGTGGGTGCTGCTTGGCGATCCGAAGAATGTCACACCGGTATGTGCTTCC AATCATCGATCTAGATCTGCTTGAGACAGGGGCTAACCTCTTATCATACAGCGCCTGTGGTTCAAGCACTTCTTT GCTCGTGTCTTCTGCCTGATTGTTATTCCCCTCAGCTTCTACTGCGCCATGTTTGGAATCCACTTCCTGTGCCTT GTCAACCCCGGCGATGGAGATGGATTCATGTCCTCCGAGTTCCAAGCAACCCTGAACTCCAAGGGGATGCAGGAC GTTCCCGCCGATGTTGCATTTGGTTCCCGCGTCAGCATCCGTCACCTCAACACCCAAGGAGGCTATCTTCATTCT CACAATCACATGTACCCCACGGGAAGCAAGCAGCAGCAGATAACGCTCTACCCCCACAAGGATGAGAACAACATT TTCGTCCTTGAGAACCAGACTCAGCCTCTTGGTCCCTACGGAACAGTGGAGGGCCCCTTGGCCTGGGACAACATC ACCGCAGAGTATATCGAAGACGGAGCTGTGATCAGGTTGAATCACCTTATCACTCGGAGGCGAATTCACTCGCAT GATGAGCGGCCTCCTGTCACAGATGTGGATTGGCAATTCGAGGTGTCTGCCTATGGATACGACGGATTCCCGGGA GATGCAAACGATCTCTTCCGTGTTGAAATTGTGAAATCTCTGTCTGAGGGTGAGGAGGCGAAGAAGCGACTGCGG ACTATCCAGACCAAGTTCCGTCTGGTGCACATCATGACTAACTGTGTCTTGTTTTCCCACAAAGTCAAGCTTCCC GAGTGGGGTTTCGACCAGCAAGAGGTGACCTGTGCCAGAGGAGCTACTTTGCCCAACAGCATCTGGTATATTGAG TCGAACAGCCACCCTATGCTCGCAGACGATGTTGAAAAGGTCAACTACAAGAACCCCGGTTTCTTCGGCAAGTTC TGGGAGCTGCAGAAGGTGATGTGGATTACCAACGCGGGCCTAACTGAATCGCACGCTTGGGACTCTCGCCCGCCT TCCTGGCCAACCCTCCTCCGTGGCATCAACTTCTGGGGCAAGGATCACCGCCAAGTCTACCTCCTGGGCAACCCC TTCATCTGGTGGTCTTCAACCGTGGCCATCGTTATCTACATTATTTTCAAGGGAGTCTCTGTTCTTCGCTGGCAG CGGAGCTGTGGTGACTACCACAACGTGAACTTCAAGCGGTTCGACTACGAAATTGGTACCAGCGTACTTGGCTGG GCTTTCCACTACTTCCCCTTCTACCTCATGGCGCGACAGCTCTTCCTGCACCATTATTTCCCTGCCCTCTATTTC GCTATCATCGCCCTCTGTCAGGAATTCGACTTCCTTGCCAACCGTATTAAGAGTCTTGGGATACCATCTCGCCCT GTTATCGGCAAAGTGTTGGCCGGTATCTTCCTTGCGATTAGCATCTTTACTTTCACACTGTACTCGCCTCTGGTC TACGGCAACCCCTGGACACAGGACGCTTGCAACAGTGTAAAGCTCATGGACAGCTGGGACTTTGACTGCCACACA TTCTACACTAGCGTAAGTCTCCCGGGTACCGCAGCCAATACGCATGTTGTAGATGCTGACATGATTACAGCTTGA CCAGTATGTGACCCAAATTGTGGACACCCACGCGGCCATCCCCACGACTCAGACATCGGTACAACAAGTACCCCC CGTTGTGATGGAACAACCACCGCAGCAGCAGGTCCCGCAGCAGGTCCAGCAACAGAACCAGGAAGTCCTGCAGGA GGAGGCCCAGGAACCGGGTGTCACGCCCCGGGCTCGGCACACTGCCAAGGCCCGTGTGGAATACCGTGATCAACA CGGAAACGTGCTGGACGAAGAACTTGTTGCTCAGTTAAAGAAGGAAGGTAAGGTCCAGTTCGAGAGCCGTCATGA GACGAAGACTCGCCTGGAGAACGGCCGCATTGTCGACATGATCGACGGTCAAATCGCCCCGCCTCACCCCGACGT TGAAGGTCAGAACCCTGAAACTGTTGGAAGACAGCCACCTCAGGCTGTAGAGGACGGCCCAGCCTCAGTAGCCGG GCAAGGAAGCTCCCAGGAGCAGCGCGGCTCGCCTGACCCCAAGCCGGCCAGTGAGGCCAATGAGGCTACCAAATC TTGA |