Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ani_SJS72_1\|g5414.t1
Gene name
Location	scaffold_037:97026..97594
Strand	+
Gene length (bp)	568
Transcript length (bp)	519
Coding sequence length (bp)	519
Protein length (aa)	173

PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 11	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	5	27	22
2	56	78	22
3	85	107	22
4	127	149	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ani_SJS72_1\|g5414.t1 MPTTIFPPIPYFIFGIFEPLALIGGSLYPHLQPSSFILSQIPHNPDTTGTITPSSLSLAYQLSNIYFLLALLGIA LIHSTSEPKVLRNYLVCLAVADLTHILAAGYAMGWERFVDIAGWNALTWGNVGVTAGLFLSRVVVLAGGLGGVVG QVGEGKMKLKAKGKGKGKRKGY*
Coding	>Ani_SJS72_1\|g5414.t1 ATGCCAACCACCATTTTCCCCCCAATCCCCTACTTCATCTTCGGCATTTTCGAGCCCCTAGCCCTAATCGGCGGC TCCCTCTACCCCCACCTACAACCCTCCTCCTTCATCCTATCCCAAATCCCACATAACCCAGACACTACAGGAACC ATCACTCCCTCCTCGCTCTCCCTCGCCTACCAACTCTCCAACATCTACTTCCTGCTCGCGCTTCTCGGCATCGCG CTGATCCACAGCACCTCGGAGCCCAAAGTCCTGCGCAACTATCTGGTGTGTTTGGCGGTTGCGGATCTGACGCAT ATCTTGGCCGCGGGGTATGCCATGGGATGGGAGAGGTTCGTGGATATAGCCGGGTGGAATGCGCTTACGTGGGGG AATGTGGGTGTTACGGCGGGACTGTTTTTGAGTAGGGTTGTGGTGTTGGCGGGTGGGTTGGGGGGTGTTGTTGGT CAGGTTGGTGAGGGGAAGATGAAATTGAAGGCGAAGGGTAAGGGTAAGGGTAAGAGGAAGGGGTATTGA
Transcript	>Ani_SJS72_1\|g5414.t1 ATGCCAACCACCATTTTCCCCCCAATCCCCTACTTCATCTTCGGCATTTTCGAGCCCCTAGCCCTAATCGGCGGC TCCCTCTACCCCCACCTACAACCCTCCTCCTTCATCCTATCCCAAATCCCACATAACCCAGACACTACAGGAACC ATCACTCCCTCCTCGCTCTCCCTCGCCTACCAACTCTCCAACATCTACTTCCTGCTCGCGCTTCTCGGCATCGCG CTGATCCACAGCACCTCGGAGCCCAAAGTCCTGCGCAACTATCTGGTGTGTTTGGCGGTTGCGGATCTGACGCAT ATCTTGGCCGCGGGGTATGCCATGGGATGGGAGAGGTTCGTGGATATAGCCGGGTGGAATGCGCTTACGTGGGGG AATGTGGGTGTTACGGCGGGACTGTTTTTGAGTAGGGTTGTGGTGTTGGCGGGTGGGTTGGGGGGTGTTGTTGGT CAGGTTGGTGAGGGGAAGATGAAATTGAAGGCGAAGGGTAAGGGTAAGGGTAAGAGGAAGGGGTATTGA
Gene	>Ani_SJS72_1\|g5414.t1 ATGCCAACCACCATTTTCCCCCCAATCCCCTACTTCATCTTCGGCATTTTCGAGCCCCTAGCCCTGTACGTCCCC CCATCCCCCATCACCATAACTACTAATAACTTTCAACAGAATCGGCGGCTCCCTCTACCCCCACCTACAACCCTC CTCCTTCATCCTATCCCAAATCCCACATAACCCAGACACTACAGGAACCATCACTCCCTCCTCGCTCTCCCTCGC CTACCAACTCTCCAACATCTACTTCCTGCTCGCGCTTCTCGGCATCGCGCTGATCCACAGCACCTCGGAGCCCAA AGTCCTGCGCAACTATCTGGTGTGTTTGGCGGTTGCGGATCTGACGCATATCTTGGCCGCGGGGTATGCCATGGG ATGGGAGAGGTTCGTGGATATAGCCGGGTGGAATGCGCTTACGTGGGGGAATGTGGGTGTTACGGCGGGACTGTT TTTGAGTAGGGTTGTGGTGTTGGCGGGTGGGTTGGGGGGTGTTGTTGGTCAGGTTGGTGAGGGGAAGATGAAATT GAAGGCGAAGGGTAAGGGTAAGGGTAAGAGGAAGGGGTATTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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