Protein ID | Ani_SJS72_1|g541.t1 |
Gene name | |
Location | scaffold_002:692458..694736 |
Strand | + |
Gene length (bp) | 2278 |
Transcript length (bp) | 2118 |
Coding sequence length (bp) | 2118 |
Protein length (aa) | 706 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF02990 | EMP70 | Endomembrane protein 70 | 1.6E-199 | 56 | 662 |
GO Term | Description | Terminal node |
---|---|---|
GO:0016021 | integral component of membrane | Yes |
GO:0031224 | intrinsic component of membrane | No |
GO:0110165 | cellular anatomical entity | No |
GO:0005575 | cellular_component | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
Yes | 1 - 25 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 10 | 32 | 22 |
2 | 305 | 327 | 22 |
3 | 407 | 429 | 22 |
4 | 436 | 458 | 22 |
5 | 473 | 495 | 22 |
6 | 502 | 524 | 22 |
7 | 561 | 583 | 22 |
8 | 595 | 617 | 22 |
9 | 632 | 654 | 22 |
10 | 667 | 689 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS72_1|g541.t1 MALSQIWRPHQWTLWLLFVSYAYAFYVPGYSVKRYNDDEHIPLLVNKIFSDNTQLQYAYFDLPFVCPPSGRSHGG SPFGSGQSVSLNLGEILRGDRIMTSDFELQMGKNVECQALCTQEVGRKDVKWGRQLIHEGYVAEWIADNLPGATS FVTVDRSRKYYATGFKLGFQEFSPIDGKPRYYINNHFTIVIRWRSAPEGGKVIVGFEIYPKSIRAADHLEGGCPQ HVHETHEGLELYIPPDTSKLREMYPGSSYIPEDDGDIDDGATLKIPYTYSVYFKEENGVDWWNRWDLYFSNQDEG STTHWLAILNSLTIAGVLGVAVYVIWSRTVQGDIKGRGDGAMEDGKLKVRKAKPERKGDGLLEQGVDVERDADVS SDDEGLDDVSGWKLLHGDVFRVPQYSGLLAPLVGSGMQLLFMVSGLLLLSCLGVLNPSFRGGFVSVGMGLFVFAG LFSGYFSGRLYKTFGGTYWRKNTLITALFFPGLAFSLIFILNLFVWAQASSTAIPFGTLVSLLALWLLIQVPLVY AGSWYGYVRTAPWEHPTKTTSIARQIPPQPWYLHSISGTLLTGLGPFAVLFIELLFVFKNLWQDKSGYYYVFGFL SAVSSILMVTVSEVTVIATYSQLCAENYHWWWQSFLTGSSSAFWVFGYCVWYFIFHLHITGFVSSLLFFSYSFLA CAVYGLLTGTVGFLTAYMFVRRIYSSVKVD* |
Coding | >Ani_SJS72_1|g541.t1 ATGGCGTTGTCTCAAATTTGGCGTCCCCATCAGTGGACGCTATGGCTTCTCTTTGTGTCTTATGCCTATGCGTTC TACGTTCCTGGCTACTCGGTCAAGCGCTATAACGACGATGAGCATATTCCCCTCCTTGTGAATAAGATCTTCTCC GACAACACACAACTCCAGTATGCCTACTTCGACCTGCCTTTCGTCTGTCCTCCTAGCGGAAGATCGCATGGTGGT TCCCCCTTTGGTTCCGGACAAAGCGTTTCTCTGAATCTGGGAGAGATCCTCCGCGGCGATCGCATCATGACCTCG GATTTCGAACTTCAGATGGGCAAAAACGTCGAATGCCAAGCGCTCTGCACACAGGAGGTCGGGCGTAAGGATGTC AAATGGGGTCGTCAACTCATCCATGAAGGTTATGTAGCGGAATGGATTGCCGACAATCTGCCTGGCGCGACAAGC TTTGTGACCGTTGACCGTAGTCGCAAATATTATGCCACTGGCTTCAAGCTGGGATTCCAGGAATTCTCGCCCATT GACGGCAAGCCGCGTTACTACATCAACAATCACTTCACCATTGTCATCCGCTGGCGGTCGGCACCCGAGGGCGGA AAGGTTATTGTTGGATTCGAGATCTACCCGAAGAGCATTCGCGCCGCCGATCATCTGGAGGGCGGCTGTCCCCAA CATGTTCACGAGACCCACGAGGGACTGGAGCTGTACATCCCCCCGGATACCTCCAAACTGCGCGAAATGTACCCT GGATCGTCGTACATCCCTGAGGACGATGGCGACATTGATGACGGTGCCACTTTGAAGATCCCCTACACCTACTCC GTCTACTTCAAGGAGGAAAACGGAGTCGACTGGTGGAACCGGTGGGACCTCTACTTCAGCAACCAGGATGAGGGC TCTACGACTCATTGGCTTGCTATCCTCAACTCACTGACCATCGCTGGTGTTCTTGGTGTCGCCGTGTATGTTATT TGGAGTCGCACGGTTCAAGGAGACATCAAGGGTCGTGGAGATGGGGCTATGGAGGATGGAAAACTTAAGGTCCGG AAAGCTAAGCCCGAGAGAAAGGGCGATGGACTTTTGGAGCAAGGAGTAGATGTCGAACGGGATGCGGACGTTTCA TCCGACGACGAGGGTCTTGATGACGTGAGCGGGTGGAAACTCCTTCATGGTGATGTGTTCCGTGTGCCCCAGTAC AGTGGACTGCTTGCGCCCCTTGTCGGCTCCGGTATGCAGCTGCTCTTTATGGTGTCGGGGCTTCTGCTACTCAGC TGCCTGGGTGTTCTGAACCCGAGTTTCCGTGGCGGTTTCGTCAGCGTTGGTATGGGCCTGTTCGTCTTCGCTGGT CTTTTCTCGGGTTACTTTTCGGGGAGGCTTTACAAGACCTTTGGCGGTACATATTGGCGCAAGAACACTCTCATA ACTGCGTTGTTTTTCCCTGGACTCGCTTTCAGTCTCATCTTCATTCTCAACCTCTTCGTGTGGGCGCAGGCTTCT AGCACTGCCATTCCTTTTGGCACGCTGGTGAGTCTTCTGGCTCTTTGGCTGCTCATCCAAGTGCCGTTGGTCTAT GCCGGTAGCTGGTACGGATACGTGCGCACCGCGCCTTGGGAGCACCCGACCAAGACGACCTCAATTGCGCGTCAG ATCCCGCCACAGCCATGGTATTTGCACAGCATCAGCGGGACGCTCTTGACCGGCCTGGGTCCATTTGCGGTGCTG TTCATTGAGCTTCTGTTTGTGTTCAAGAACCTGTGGCAGGACAAGAGCGGATACTACTATGTGTTTGGCTTTTTG AGCGCCGTGTCGTCGATCCTGATGGTAACGGTCAGCGAAGTGACGGTCATCGCGACATACAGCCAACTCTGCGCG GAGAACTACCACTGGTGGTGGCAGAGCTTCCTCACGGGTAGCAGCAGTGCGTTCTGGGTGTTTGGCTACTGCGTG TGGTACTTCATCTTCCACCTGCACATCACTGGGTTCGTGTCGAGTCTGCTGTTCTTCAGCTACAGCTTCCTGGCA TGCGCCGTGTATGGTCTCCTGACGGGCACGGTTGGATTTTTGACGGCGTACATGTTCGTCCGGCGGATCTACAGT TCCGTCAAAGTTGATTGA |
Transcript | >Ani_SJS72_1|g541.t1 ATGGCGTTGTCTCAAATTTGGCGTCCCCATCAGTGGACGCTATGGCTTCTCTTTGTGTCTTATGCCTATGCGTTC TACGTTCCTGGCTACTCGGTCAAGCGCTATAACGACGATGAGCATATTCCCCTCCTTGTGAATAAGATCTTCTCC GACAACACACAACTCCAGTATGCCTACTTCGACCTGCCTTTCGTCTGTCCTCCTAGCGGAAGATCGCATGGTGGT TCCCCCTTTGGTTCCGGACAAAGCGTTTCTCTGAATCTGGGAGAGATCCTCCGCGGCGATCGCATCATGACCTCG GATTTCGAACTTCAGATGGGCAAAAACGTCGAATGCCAAGCGCTCTGCACACAGGAGGTCGGGCGTAAGGATGTC AAATGGGGTCGTCAACTCATCCATGAAGGTTATGTAGCGGAATGGATTGCCGACAATCTGCCTGGCGCGACAAGC TTTGTGACCGTTGACCGTAGTCGCAAATATTATGCCACTGGCTTCAAGCTGGGATTCCAGGAATTCTCGCCCATT GACGGCAAGCCGCGTTACTACATCAACAATCACTTCACCATTGTCATCCGCTGGCGGTCGGCACCCGAGGGCGGA AAGGTTATTGTTGGATTCGAGATCTACCCGAAGAGCATTCGCGCCGCCGATCATCTGGAGGGCGGCTGTCCCCAA CATGTTCACGAGACCCACGAGGGACTGGAGCTGTACATCCCCCCGGATACCTCCAAACTGCGCGAAATGTACCCT GGATCGTCGTACATCCCTGAGGACGATGGCGACATTGATGACGGTGCCACTTTGAAGATCCCCTACACCTACTCC GTCTACTTCAAGGAGGAAAACGGAGTCGACTGGTGGAACCGGTGGGACCTCTACTTCAGCAACCAGGATGAGGGC TCTACGACTCATTGGCTTGCTATCCTCAACTCACTGACCATCGCTGGTGTTCTTGGTGTCGCCGTGTATGTTATT TGGAGTCGCACGGTTCAAGGAGACATCAAGGGTCGTGGAGATGGGGCTATGGAGGATGGAAAACTTAAGGTCCGG AAAGCTAAGCCCGAGAGAAAGGGCGATGGACTTTTGGAGCAAGGAGTAGATGTCGAACGGGATGCGGACGTTTCA TCCGACGACGAGGGTCTTGATGACGTGAGCGGGTGGAAACTCCTTCATGGTGATGTGTTCCGTGTGCCCCAGTAC AGTGGACTGCTTGCGCCCCTTGTCGGCTCCGGTATGCAGCTGCTCTTTATGGTGTCGGGGCTTCTGCTACTCAGC TGCCTGGGTGTTCTGAACCCGAGTTTCCGTGGCGGTTTCGTCAGCGTTGGTATGGGCCTGTTCGTCTTCGCTGGT CTTTTCTCGGGTTACTTTTCGGGGAGGCTTTACAAGACCTTTGGCGGTACATATTGGCGCAAGAACACTCTCATA ACTGCGTTGTTTTTCCCTGGACTCGCTTTCAGTCTCATCTTCATTCTCAACCTCTTCGTGTGGGCGCAGGCTTCT AGCACTGCCATTCCTTTTGGCACGCTGGTGAGTCTTCTGGCTCTTTGGCTGCTCATCCAAGTGCCGTTGGTCTAT GCCGGTAGCTGGTACGGATACGTGCGCACCGCGCCTTGGGAGCACCCGACCAAGACGACCTCAATTGCGCGTCAG ATCCCGCCACAGCCATGGTATTTGCACAGCATCAGCGGGACGCTCTTGACCGGCCTGGGTCCATTTGCGGTGCTG TTCATTGAGCTTCTGTTTGTGTTCAAGAACCTGTGGCAGGACAAGAGCGGATACTACTATGTGTTTGGCTTTTTG AGCGCCGTGTCGTCGATCCTGATGGTAACGGTCAGCGAAGTGACGGTCATCGCGACATACAGCCAACTCTGCGCG GAGAACTACCACTGGTGGTGGCAGAGCTTCCTCACGGGTAGCAGCAGTGCGTTCTGGGTGTTTGGCTACTGCGTG TGGTACTTCATCTTCCACCTGCACATCACTGGGTTCGTGTCGAGTCTGCTGTTCTTCAGCTACAGCTTCCTGGCA TGCGCCGTGTATGGTCTCCTGACGGGCACGGTTGGATTTTTGACGGCGTACATGTTCGTCCGGCGGATCTACAGT TCCGTCAAAGTTGATTGA |
Gene | >Ani_SJS72_1|g541.t1 ATGGCGTTGTCTCAAATTTGGCGTCCCCATCAGTGGACGCTATGGCTTCTCTTTGTGTCTTATGCCTATGCGTTC TACGTTCCTGGTAGGTGGTCTACGCTGCGACGATGCCCGTAGGAATCTTGACGCTTACGCATGAATGCTACTGCC AGGCTACTCGGTCAAGCGCTATAACGACGATGAGCATATTCCCCTCCTTGTGAATAAGATCTTCTCCGACAACAC ACAACTCCAGTATGCCTACTTCGACCTGCCTTTCGTCTGTCCTCCTAGCGGAAGATCGCATGGTGGTTCCCCCTT TGGTTCCGGACAAAGCGTTTCTCTGAATCTGGGAGAGATCCTCCGCGGCGATCGCATCATGACCTCGGATTTCGA ACTTCAGATGGGCAAAAACGTCGAATGCCAAGCGCTCTGCACACAGGAGGTCGGGCGTAAGGATGTCAAATGGGG TCGTCAACTCATCCATGAAGGTTATGTAGCGGAATGGATTGCCGACAATCTGCCTGGCGCGACAAGCTTTGTGAC CGTTGACCGTAGTCGCAAATATTATGCCACTGGCTTCAAGCTGGGATTCCAGGAATTCTCGCCCATTGACGGCAA GCCGCGTTACTACATCAACAATCACTTCACCATTGTCATCCGCTGGCGGTCGGCACCCGAGGGCGGAAAGGTTAT TGTTGGATTCGAGATCTACCCGAAGAGCATTCGCGCCGCCGATCATCTGGAGGGCGGCTGTCCCCAACATGTTCA CGAGACCCACGAGGGACTGGAGCTGTACATCCCCCCGGATACCTCCAAACTGCGCGAAATGTACCCTGGATCGTC GTACATCCCTGAGGACGATGGCGACATTGATGACGGTGCCACTTTGAAGATCCCCTACACCTACTCCGTCTACTT CAAGGAGGAAAACGGAGTCGACTGGTGGAACCGGTGGGACCTCTACTTCAGCAACCAGGATGAGGGCTCTACGAC TCATTGGCTTGCTATCCTCAACTCACTGACCATCGCTGGTGTTCTTGGTGTCGCCGTGTATGTTATTTGGAGTCG CACGGTTCAAGGAGACATCAAGGGTCGTGGAGATGGGGCTATGGAGGATGGAAAACTTAAGGTCCGGAAAGCTAA GCCCGAGAGAAAGGGCGATGGACTTTTGGAGCAAGGAGTAGATGTCGAACGGGATGCGGACGTTTCATCCGACGA CGAGGGTCTTGATGACGTGAGCGGGTGGAAACTCCTTCATGGTGATGTGTTCCGTGTGCCCCAGTACAGTGGACT GCTTGCGCCCCTTGTCGGCTCCGGTATGCAGCTGCTCTTTATGGTGTCGGGGCTTCTGCTACTCAGCTGCCTGGG TGTTCTGAACCCGAGTTTCCGTGGCGGTTTCGTCAGCGTTGGTATGGGCCTGTTCGTCTTCGCTGGTCTTTTCTC GGGTTACTTTTCGGGGAGGCTTTACAAGACCTTTGGCGGTACATATTGGCGCAAGAACACTCTCATAGTAAGTCA TTCAAATGGTGTAGGTGGACCCTGGCTGACAGATTCAGACTGCGTTGTTTTTCCCTGGACTCGCTTTCAGTCTCA TCTTCATTCTCAACCTCTTCGTGTGGGCGCAGGCTTCTAGCACTGCCATTCCTTTTGGCACGCTGGTGAGTCTTC TGGCTCTTTGGCTGCTCATCCAAGTGCCGTTGGTCTATGCCGGTAGCTGGTACGGATACGTGCGCACCGCGCCTT GGGAGCACCCGACCAAGACGACCTCAATTGCGCGTCAGATCCCGCCACAGCCATGGTATTTGCACAGCATCAGCG GGACGCTCTTGACCGGCCTGGGTCCATTTGCGGTGCTGTTCATTGAGCTTCTGTTTGTGTTCAAGAACCTGTGGC AGGACAAGAGCGGATACTACTATGTGTTTGGCTTTTTGAGCGCCGTGTCGTCGATCCTGATGGTAACGGTCAGCG AAGTGACGGTCATCGCGACATACAGCCAACTCTGCGCGGAGAACTACCACTGGTGGTGGCAGAGCTTCCTCACGG GTAGCAGCAGTGCGTTCTGGGTGTTTGGCTACTGCGTGTGGTACTTCATCTTCCACCTGCACATCACTGGGTTCG TGTCGAGTCTGCTGTTCTTCAGCTACAGCTTCCTGGCATGCGCCGTGTATGGTCTCCTGACGGGCACGGTTGGAT TTTTGACGGCGTACATGTTCGTCCGGCGGATCTACAGGTGAGTTGATTGCTCTGTTGTACCTAGGCCGATGCTAA CCGAAGCAGTTCCGTCAAAGTTGATTGA |