© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g5391.t1 |
| Gene name | |
| Location | scaffold_037:16086..18272 |
| Strand | - |
| Gene length (bp) | 2186 |
| Transcript length (bp) | 1701 |
| Coding sequence length (bp) | 1701 |
| Protein length (aa) | 567 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01699 | Na_Ca_ex | Sodium/calcium exchanger protein | 2.0E-20 | 193 | 345 |
| PF01699 | Na_Ca_ex | Sodium/calcium exchanger protein | 7.0E-24 | 412 | 556 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0009987 | cellular process | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005575 | cellular_component | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0006810 | transport | No |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 31 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 164 | 186 | 22 |
| 2 | 190 | 212 | 22 |
| 3 | 225 | 247 | 22 |
| 4 | 257 | 279 | 22 |
| 5 | 286 | 308 | 22 |
| 6 | 323 | 345 | 22 |
| 7 | 409 | 431 | 22 |
| 8 | 446 | 468 | 22 |
| 9 | 477 | 499 | 22 |
| 10 | 509 | 531 | 22 |
| 11 | 538 | 560 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g5391.t1 MHIYKRHARKLAWYDQEGEPSSVNPFKKFRRQPRRTNSIQLENRLTPVLSEGGVRLSEERRRRRDMTDGLVGPEH ADSFPPQSAGTDLVGRTDSNDKAGTNPSMHSQVPINVPRQDEPDDLQGPRKRRTFLSNTFKPEDDQLTTDSGKPI AKKHKFTVMGQLKATIFNSWINVLLVAAPVGIALNYVNGVSPVAVFVVNFIAIIPLAAMLSYATEEIAMRTGETI GGLLNASFGNAVELIVAIIALVDNEVTIVQTSLIGSMLSNLLLVMGMCFFFGGIDRLEQHFNPVVAQTAASLLAL AVGSLIIPTAFHAWSDAGDTGVAPLSRGTSVILLVVYGCYLFFQLKSHTEIYNAPSPKVEKRRQKVNEGDASRGI AQIGKMSASMAGEHAQNVKLQEPDDEEEEPQLSVVVAVLTLVISTVFVALCAEFMVDSIDALTTQGHISETFVGL ILLPIVGNAAEHATAVTVACKDKMDLAIGVAVGSSMQIALLVLPLIIVIGWGMGNDDMTLYFDAFQVILLFVAVL LVNYLIADGKSHWLEGVLLMMMYLIIAVAAWFYPSKTEPST* |
| Coding | >Ani_SJS72_1|g5391.t1 ATGCATATCTACAAACGACATGCCAGGAAACTGGCCTGGTATGACCAGGAGGGCGAACCATCCTCGGTGAACCCT TTCAAGAAGTTTCGCAGACAGCCCCGACGCACCAACTCGATCCAGCTGGAAAACCGACTCACCCCCGTGTTGTCT GAGGGCGGAGTACGCCTGTCCGAGGAGCGCCGGCGACGGAGAGACATGACCGATGGTCTAGTCGGTCCTGAGCAT GCAGATAGCTTCCCTCCTCAGTCCGCTGGCACTGATTTGGTTGGAAGAACGGACAGCAATGATAAAGCGGGCACC AACCCTTCCATGCATAGTCAAGTTCCCATCAATGTTCCGCGCCAGGATGAGCCCGACGACCTGCAGGGCCCGCGA AAGAGAAGGACCTTCTTGAGCAACACTTTCAAACCCGAAGATGATCAGTTGACCACCGATTCGGGCAAGCCGATC GCAAAGAAGCACAAGTTTACTGTCATGGGACAGTTGAAGGCTACGATCTTCAATTCTTGGATTAACGTTTTGCTT GTCGCCGCGCCGGTTGGAATTGCGTTGAATTATGTCAACGGTGTCAGCCCAGTGGCTGTCTTTGTGGTGAATTTT ATTGCGATCATCCCCCTCGCAGCCATGTTGAGTTACGCGACAGAGGAGATTGCCATGCGCACGGGTGAGACAATC GGAGGTCTGCTCAATGCGTCTTTCGGTAACGCGGTCGAACTTATTGTTGCCATTATCGCTCTGGTGGACAATGAA GTCACCATCGTGCAAACATCTTTGATCGGAAGTATGCTTTCGAATCTGCTTCTGGTCATGGGCATGTGCTTCTTC TTTGGTGGTATCGACCGTCTAGAGCAACATTTCAATCCTGTGGTTGCTCAGACGGCCGCTAGTTTGCTAGCGTTG GCCGTGGGAAGTTTGATTATTCCCACGGCGTTCCACGCTTGGTCCGATGCTGGCGATACGGGAGTCGCACCCTTG TCACGAGGCACCAGTGTAATCCTGCTGGTCGTTTACGGATGCTATCTGTTTTTCCAGCTCAAGTCGCACACGGAG ATCTACAACGCTCCCAGCCCCAAGGTAGAGAAGAGACGGCAGAAGGTGAACGAAGGTGATGCCAGCCGTGGTATC GCGCAGATTGGCAAGATGTCCGCCTCCATGGCGGGCGAACATGCGCAGAACGTGAAGCTCCAGGAACCGGACGAT GAAGAGGAAGAACCTCAGCTGAGTGTTGTCGTGGCTGTGCTGACGCTCGTTATCTCCACCGTTTTTGTTGCCCTG TGCGCTGAGTTCATGGTTGACTCGATCGACGCTCTCACCACACAAGGCCACATCTCCGAGACCTTTGTCGGATTG ATCCTTCTGCCTATTGTGGGTAATGCAGCTGAGCACGCCACCGCCGTGACTGTGGCATGCAAGGACAAGATGGAT CTGGCCATTGGTGTGGCGGTAGGATCCAGCATGCAGATTGCACTATTGGTGCTGCCATTGATCATCGTGATTGGA TGGGGCATGGGTAACGACGATATGACTCTGTATTTCGATGCCTTCCAGGTGATTCTTCTTTTTGTGGCTGTTCTT TTGGTAAACTACCTCATCGCCGACGGAAAGTCGCACTGGCTAGAGGGTGTATTGTTGATGATGATGTACCTCATC ATAGCCGTGGCTGCCTGGTTCTATCCCTCCAAGACTGAGCCCTCCACCTAA |
| Transcript | >Ani_SJS72_1|g5391.t1 ATGCATATCTACAAACGACATGCCAGGAAACTGGCCTGGTATGACCAGGAGGGCGAACCATCCTCGGTGAACCCT TTCAAGAAGTTTCGCAGACAGCCCCGACGCACCAACTCGATCCAGCTGGAAAACCGACTCACCCCCGTGTTGTCT GAGGGCGGAGTACGCCTGTCCGAGGAGCGCCGGCGACGGAGAGACATGACCGATGGTCTAGTCGGTCCTGAGCAT GCAGATAGCTTCCCTCCTCAGTCCGCTGGCACTGATTTGGTTGGAAGAACGGACAGCAATGATAAAGCGGGCACC AACCCTTCCATGCATAGTCAAGTTCCCATCAATGTTCCGCGCCAGGATGAGCCCGACGACCTGCAGGGCCCGCGA AAGAGAAGGACCTTCTTGAGCAACACTTTCAAACCCGAAGATGATCAGTTGACCACCGATTCGGGCAAGCCGATC GCAAAGAAGCACAAGTTTACTGTCATGGGACAGTTGAAGGCTACGATCTTCAATTCTTGGATTAACGTTTTGCTT GTCGCCGCGCCGGTTGGAATTGCGTTGAATTATGTCAACGGTGTCAGCCCAGTGGCTGTCTTTGTGGTGAATTTT ATTGCGATCATCCCCCTCGCAGCCATGTTGAGTTACGCGACAGAGGAGATTGCCATGCGCACGGGTGAGACAATC GGAGGTCTGCTCAATGCGTCTTTCGGTAACGCGGTCGAACTTATTGTTGCCATTATCGCTCTGGTGGACAATGAA GTCACCATCGTGCAAACATCTTTGATCGGAAGTATGCTTTCGAATCTGCTTCTGGTCATGGGCATGTGCTTCTTC TTTGGTGGTATCGACCGTCTAGAGCAACATTTCAATCCTGTGGTTGCTCAGACGGCCGCTAGTTTGCTAGCGTTG GCCGTGGGAAGTTTGATTATTCCCACGGCGTTCCACGCTTGGTCCGATGCTGGCGATACGGGAGTCGCACCCTTG TCACGAGGCACCAGTGTAATCCTGCTGGTCGTTTACGGATGCTATCTGTTTTTCCAGCTCAAGTCGCACACGGAG ATCTACAACGCTCCCAGCCCCAAGGTAGAGAAGAGACGGCAGAAGGTGAACGAAGGTGATGCCAGCCGTGGTATC GCGCAGATTGGCAAGATGTCCGCCTCCATGGCGGGCGAACATGCGCAGAACGTGAAGCTCCAGGAACCGGACGAT GAAGAGGAAGAACCTCAGCTGAGTGTTGTCGTGGCTGTGCTGACGCTCGTTATCTCCACCGTTTTTGTTGCCCTG TGCGCTGAGTTCATGGTTGACTCGATCGACGCTCTCACCACACAAGGCCACATCTCCGAGACCTTTGTCGGATTG ATCCTTCTGCCTATTGTGGGTAATGCAGCTGAGCACGCCACCGCCGTGACTGTGGCATGCAAGGACAAGATGGAT CTGGCCATTGGTGTGGCGGTAGGATCCAGCATGCAGATTGCACTATTGGTGCTGCCATTGATCATCGTGATTGGA TGGGGCATGGGTAACGACGATATGACTCTGTATTTCGATGCCTTCCAGGTGATTCTTCTTTTTGTGGCTGTTCTT TTGGTAAACTACCTCATCGCCGACGGAAAGTCGCACTGGCTAGAGGGTGTATTGTTGATGATGATGTACCTCATC ATAGCCGTGGCTGCCTGGTTCTATCCCTCCAAGACTGAGCCCTCCACCTAA |
| Gene | >Ani_SJS72_1|g5391.t1 ATGCGTATGTATTCTCTCCTCCCCCCTTTTCCGCCCGCGAGCGTCCCTAACATGCATCTTGGCATCAGATATCTA CAAACGACATGCCAGGAAACTGGCCTGGTATGACCAGGAGGGCGAACCATCCTCGGTGAACCCTTTCAAGAAGTT TCGCAGACAGCCCCGACGCACCAACTCGATCCAGCTGGAAAACCGACTCACCCCCGTGTTGTCTGAGGGCGGAGT ACGCCTGTCCGAGGAGCGCCGGCGACGGAGAGACATGACCGATGGTCTAGTCGGTCCTGAGCATGCAGATAGCTT CCCTCCTCAGTCCGCTGGCACTGATTTGGTTGGAAGAACGGACAGCAATGATAAAGCGGGCACCAACCCTTCCAT GCATAGTCAAGTTCCCATCAATGTTCCGCGCCAGGATGAGCCCGACGACCTGCAGGGCCCGCGAAAGAGAAGGAC CTTCTTGAGCAACACTTTCAAACCCGAAGATGATCAGTTGACCACCGATTCGGGCAAGCCGATCGCAAAGAAGCA CAAGTTTACTGTCATGGGACAGTTGAAGGCTACGATCTTCAATTCTTGGATTAACGTTTTGCTTGTCGCCGCGCC GGTTGGAAGTAAGTATTTCAACAGATTCTCAAGAAGCTGTACTGACTCCTGATAGTTGCGTTGAATTATGTCAAC GGTGTCAGCCCAGTGGCTGTCTTTGTGGTGAATTTTATTGCGATCATGTAGGTCTACGCTTCCCGGTACAACTAC TCAGCTAACGTGAACAGCCCCCTCGCAGCCATGTTGAGTTACGCGACAGAGGAGATTGCCATGCGGTATGTTGAT CGGAAACTCTGACTGGATAATTCTAATGAAGACACAGCACGGGTGAGACAATCGGAGGTCTGCTCAATGCGTCTT TCGGGTAAGTTCTATTCACATTCACAGGATTTCTGGTCTAACCCCGTACAGTAACGCGGTCGAACTTATTGTTGC CATTATCGCTCTGGTGGACAATGAAGTCACCATCGTGCAAACATCTTTGATCGGAAGTATGCTTTCGAATCTGCT TCTGGTCATGGGCATGTGCTTCTTCTTTGGTGGTATCGACCGTCTAGAGCAACATTTCAATCCTGTGGTTGCTCA GACGGCCGCTAGTTTGCTAGCGTTGGCCGTGGGAAGTTTGATTATTCCCACGGCGTTCCACGCTTGGTCCGATGG TGAGTTTTAAATTATCGTTCATCTGACGCAGCTAACAATTTCTAGCTGGCGATACGGGAGTCGCACCCTTGTCAC GAGGTATGTACCTTTCCAAAAGCGGTCAGATGTAAGCTTACGTTTTTCAGGCACCAGTGTAATCCTGCTGGTCGT TTACGGATGCTATCTGTTTTTCCAGCTCAAGTCGCACACGGAGATCTACAACGCTCCCAGCCCCAAGGTAGAGAA GAGACGGCAGAAGGTGAACGAAGGTGATGCCAGCCGTGGTATCGCGCAGATTGGCAAGATGTCCGCCTCCATGGC GGGCGAACATGCGCAGAACGTGAAGCTCCAGGAACCGGACGATGAAGAGGAAGAACCTCAGCTGAGTGTTGTCGT GGCTGTGCTGACGCTCGTTATCTCCACCGTTTTTGTTGCCCTGTGCGCTGAGTTCATGGTAAGCTACCCTTTTCT CTCATCAGGTGCGTAGCTAATTGTTTAGGTTGACTCGATCGACGCTCTCACCACACAAGGCCACATCTCCGAGAC CTTTGTCGGATTGATCCTTCTGCCTATTGTGGGTAATGCAGCTGAGCACGCCACCGCCGTGACTGTGGCATGCAA GGACAAGATGGATCTGGCCATTGGTGTGGCGGTAGGATCCAGCATGCAGATTGCACTATTGGTGCTGCCATTGAT CATCGTGATTGGATGGGGCATGGGTAAGTTCATGACCGACTATATGGATCTGAAATGATGCTGACAGTAACAGGT AACGACGATATGACTCTGTATTTCGATGCCTTCCAGGTGATTCTTCTTTTTGTGGCTGTTCTTTTGGTAAGTCTT CCACCCCGCTACACCTGAATGCCGACTAATCCATCCAGGTAAACTACCTCATCGCCGACGGAAAGTCGCACTGGC TAGAGGGTGTATTGTTGATGATGATGTACCTCATCATAGCCGTGGCTGCCTGGTTCTATCCCTCCAAGACTGAGC CCTCCACCTAA |