Protein ID | Ani_SJS72_1|g5290.t1 |
Gene name | |
Location | scaffold_036:30840..32665 |
Strand | + |
Gene length (bp) | 1825 |
Transcript length (bp) | 1335 |
Coding sequence length (bp) | 1335 |
Protein length (aa) | 445 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF01490 | Aa_trans | Transmembrane amino acid transporter protein | 3.2E-38 | 45 | 426 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 60 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 45 | 67 | 22 |
2 | 74 | 96 | 22 |
3 | 126 | 148 | 22 |
4 | 155 | 174 | 19 |
5 | 184 | 206 | 22 |
6 | 225 | 247 | 22 |
7 | 304 | 326 | 22 |
8 | 339 | 361 | 22 |
9 | 371 | 393 | 22 |
10 | 406 | 425 | 19 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS72_1|g5290.t1 MSPPSAINNPGDPLAEQEKPVGARNTTGTEDPFSHDGVGGVKYRTLAWWQCAMIMVAETISLGILSLPSAVASLG LVAAVILILGLGALATYTGYTLGQFKLRYPHVHSMGDAGEVLMGRIGREVLGTAQLLFLIFIMGSHLLTFTVMMN TLTDHGTCSIVFGVIGLAVSFAFTLPRTLKKVSWFSISSFISIIAAVLITMIAIAIQKPGGGRVDAIVDNSFYKA FLAVTNIVFAYAGHVAFFGFISEMRTPTDYPKTLYMLQGIDTSMYTISAVVIYRYGGRDVASPALGSTSPLMSKI AYGIAIPTIVIAGVINGHVACKYIYVRLFRGTDRMHQRGLVSIGTWVMIGLVLWTLAWIIAEAIPVFNDLLSLIT ALFASWFTYGLSGIFWLFLNWGRYSSSRRKILLTGLNLLVVVCALGLYVSGKSIHDHPRSSSFSCANNA* |
Coding | >Ani_SJS72_1|g5290.t1 ATGTCGCCGCCTAGTGCGATCAATAACCCTGGAGACCCGCTCGCCGAGCAAGAGAAACCCGTCGGTGCCAGAAAC ACCACTGGGACTGAGGATCCTTTCAGCCACGATGGTGTCGGCGGGGTGAAGTACCGCACTTTGGCCTGGTGGCAA TGTGCAATGATCATGGTCGCAGAGACAATCTCCCTGGGCATCCTATCCCTCCCCTCGGCCGTGGCGTCGCTTGGC CTGGTTGCAGCCGTGATCCTCATCCTTGGCCTCGGTGCTTTGGCAACTTACACGGGCTATACCCTCGGACAGTTC AAACTCCGCTACCCGCATGTGCACAGCATGGGTGATGCCGGTGAGGTCCTGATGGGTCGCATCGGTCGCGAAGTG CTGGGAACTGCGCAGCTGCTGTTTCTGATCTTTATCATGGGCAGTCATCTTCTGACGTTCACTGTGATGATGAAT ACCTTAACTGATCATGGCACCTGTTCTATTGTCTTTGGCGTCATCGGCTTGGCGGTGTCGTTCGCCTTCACCTTG CCGCGGACGCTGAAGAAGGTGTCTTGGTTTTCGATTTCATCTTTCATCAGCATTATTGCCGCAGTACTGATCACC ATGATTGCAATCGCAATTCAGAAGCCAGGTGGCGGCCGTGTTGATGCCATCGTTGACAACTCATTTTACAAAGCT TTCCTGGCTGTCACCAATATTGTCTTCGCATACGCCGGGCACGTGGCCTTCTTCGGATTCATCTCAGAAATGCGT ACGCCGACCGACTACCCCAAGACATTGTACATGCTGCAGGGGATCGATACGTCGATGTACACCATCTCGGCGGTC GTTATCTACCGCTATGGCGGGAGGGACGTGGCATCACCGGCATTGGGATCGACCAGTCCACTGATGTCCAAGATT GCCTACGGCATTGCTATTCCGACAATTGTGATCGCTGGCGTGATCAATGGTCATGTGGCATGCAAATACATCTAC GTCCGTTTGTTCCGGGGAACCGACCGCATGCACCAGCGCGGACTTGTTTCGATTGGAACGTGGGTTATGATTGGG TTGGTGCTATGGACTCTTGCGTGGATTATTGCTGAGGCGATCCCGGTGTTCAACGATCTGCTGAGTTTGATCACG GCGCTCTTTGCCAGTTGGTTCACATATGGACTAAGTGGAATATTCTGGCTGTTCCTGAACTGGGGCCGATATTCC TCGTCGCGCCGCAAGATCCTGTTGACCGGTCTCAACCTGCTGGTAGTAGTCTGCGCCCTTGGCCTCTACGTATCA GGAAAATCAATCCACGACCATCCCCGCAGCAGCAGCTTCTCATGTGCCAACAATGCTTGA |
Transcript | >Ani_SJS72_1|g5290.t1 ATGTCGCCGCCTAGTGCGATCAATAACCCTGGAGACCCGCTCGCCGAGCAAGAGAAACCCGTCGGTGCCAGAAAC ACCACTGGGACTGAGGATCCTTTCAGCCACGATGGTGTCGGCGGGGTGAAGTACCGCACTTTGGCCTGGTGGCAA TGTGCAATGATCATGGTCGCAGAGACAATCTCCCTGGGCATCCTATCCCTCCCCTCGGCCGTGGCGTCGCTTGGC CTGGTTGCAGCCGTGATCCTCATCCTTGGCCTCGGTGCTTTGGCAACTTACACGGGCTATACCCTCGGACAGTTC AAACTCCGCTACCCGCATGTGCACAGCATGGGTGATGCCGGTGAGGTCCTGATGGGTCGCATCGGTCGCGAAGTG CTGGGAACTGCGCAGCTGCTGTTTCTGATCTTTATCATGGGCAGTCATCTTCTGACGTTCACTGTGATGATGAAT ACCTTAACTGATCATGGCACCTGTTCTATTGTCTTTGGCGTCATCGGCTTGGCGGTGTCGTTCGCCTTCACCTTG CCGCGGACGCTGAAGAAGGTGTCTTGGTTTTCGATTTCATCTTTCATCAGCATTATTGCCGCAGTACTGATCACC ATGATTGCAATCGCAATTCAGAAGCCAGGTGGCGGCCGTGTTGATGCCATCGTTGACAACTCATTTTACAAAGCT TTCCTGGCTGTCACCAATATTGTCTTCGCATACGCCGGGCACGTGGCCTTCTTCGGATTCATCTCAGAAATGCGT ACGCCGACCGACTACCCCAAGACATTGTACATGCTGCAGGGGATCGATACGTCGATGTACACCATCTCGGCGGTC GTTATCTACCGCTATGGCGGGAGGGACGTGGCATCACCGGCATTGGGATCGACCAGTCCACTGATGTCCAAGATT GCCTACGGCATTGCTATTCCGACAATTGTGATCGCTGGCGTGATCAATGGTCATGTGGCATGCAAATACATCTAC GTCCGTTTGTTCCGGGGAACCGACCGCATGCACCAGCGCGGACTTGTTTCGATTGGAACGTGGGTTATGATTGGG TTGGTGCTATGGACTCTTGCGTGGATTATTGCTGAGGCGATCCCGGTGTTCAACGATCTGCTGAGTTTGATCACG GCGCTCTTTGCCAGTTGGTTCACATATGGACTAAGTGGAATATTCTGGCTGTTCCTGAACTGGGGCCGATATTCC TCGTCGCGCCGCAAGATCCTGTTGACCGGTCTCAACCTGCTGGTAGTAGTCTGCGCCCTTGGCCTCTACGTATCA GGAAAATCAATCCACGACCATCCCCGCAGCAGCAGCTTCTCATGTGCCAACAATGCTTGA |
Gene | >Ani_SJS72_1|g5290.t1 ATGTCGCCGCCTAGTGCGATCAATAACCCTGGAGACCCGCTCGCCGAGCAAGAGAAACCCGTCGGTGCCAGAAAC ACCACTGGGACTGAGGATCCTTTCAGCCACGATGGTGTCGGCGGGGTGAAGTACCGCACTTTGGCCTGGTGGTAA GCGTTCATCCCTTCATCTAGATCCGCTCTTACAGTCCGGACCTAGCTAACTGTTCAGGCAATGTGCAATGAGTAT GAGATACCAGTATCCCCAACAGATCACCTCTAACCACCTGTACAGTCATGGTCGCAGAGACAATCTCCCTGGGCA TCCTATCCCTCCCCTCGGCCGTGGCGTCGCTTGGCCTGGTTGCGTGAGTTATGATTGGTATCACCAACTAAGGGT GGCTTGGTGGCTAACTTAAGCCTTGCATAGAGCCGTGATCCTCATCCTTGGCCTCGGTGCTTTGGCAACTTACAC GGGCTATACCCTCGGACAGTTCAAACTCCGCTACCCGCATGTGCACAGCATGGGTGATGCCGGTGAGGTCCTGAT GGGTCGCATCGGTCGCGAAGTGCTGGGAACTGCGCAGCTGCTGTTTCTGATCTTTATCATGGGCAGTCATCTTCT GACGTTCACTGTGATGATGAATACCTTAACTGATCATGGCACCTGTTCTATTGTCTTTGGCGTCATCGGCTTGGC GGTGTCGTTCGCCTTCACCTTGCCGCGGACGCTGAAGAAGGTGTCTTGGTTTTCGATTTCATGTAGGTTCATTTA TGTAGTTTTTGTCAATGCAGCAAGCTGACCATGACAGCTTTCATCAGCATTATTGCCGCAGTACTGATCACCATG ATTGCAATCGCAATTCAGAAGCCAGGTGGCGGCCGTGTTGATGCCATCGTTGACAACTCATTTTACAAAGCTTTC CTGGCTGTCACCAATATTGTCTTCGCATACGGTATATGATAAAACTTTTTGAGGCAGAGGGACAAAGCTAACCAG CACAGCCGGGCACGTGGCCTTCTTCGGATTCATCTCAGAAATGCGTACGCCGACCGACTACCCCAAGACATTGTA CATGCTGCAGGGGATCGATACGTCGATGTACACCATCTCGGCGGTCGTTATCTACCGCTATGGCGGGAGGGACGT GGCATCACCGGCATTGGGATCGACCAGTCCACTGATGTCCAAGATTGCCTACGGCATTGCTATTCCGACAGTAAG CCTAGCCTTCGAATATAGTTGCATGCAACGCTGATAAGGAACATAGATTGTGATCGCTGGCGTGATCAATGGTCA TGTGGCATGCAAATACATCTACGTCCGTTTGTTCCGGGGAACCGACCGCATGCACCAGCGCGGACTTGTTTCGAT TGGAACGTGGGTTATGATTGGGTTGGTGCTATGGACTCTTGCGTGGATTATTGCTGAGGCGATCCCGGTGTTCAA CGATCTGCTGAGTTTGATCGTAGGTTCTCTTATCGCGTGTGTGTTTGAACAAGGCTAACTGTCGCAGACGGCGCT CTTTGCCAGTTGGTTCACATGTGAGTCCTACCGAGTCTAGAATCATCACTAGACTAACCCATGGTATAGATGGAC TAAGTGGAATATTCTGGCTGTTCCTGAACTGGGGCCGATATTCCTCGTCGCGCCGCAAGATCCTGTTGACCGGTC TCAACCTGCTGGTAGTAGTCGTAGGTGGCTGTCTAGTAAGCATACAACCGATCCCCATCACAAGAACATCACCTG TATACTAATCAAACAGTGCGCCCTTGGCCTCTACGTATCAGGAAAATCAATCCACGACCATCCCCGCAGCAGCAG CTTCTCATGTGCCAACAATGCTTGA |