Protein ID | Ani_SJS72_1|g5279.t1 |
Gene name | |
Location | scaffold_035:313375..315490 |
Strand | + |
Gene length (bp) | 2115 |
Transcript length (bp) | 2115 |
Coding sequence length (bp) | 2115 |
Protein length (aa) | 705 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF03370 | CBM_21 | Carbohydrate/starch-binding module (family 21) | 1.2E-35 | 320 | 430 |
PF16760 | CBM53 | Starch/carbohydrate-binding module (family 53) | 3.7E-09 | 346 | 430 |
GO Term | Description | Terminal node |
---|---|---|
GO:2001070 | starch binding | Yes |
GO:0005515 | protein binding | Yes |
GO:0030247 | polysaccharide binding | No |
GO:0003674 | molecular_function | No |
GO:0005488 | binding | No |
GO:0030246 | carbohydrate binding | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 70 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS72_1|g5279.t1 MPYTAPLKTSPSAQHIEHSELTPQSCPSSPTAVVSHPQRQHLPRSYSSTSYVRRHRRSPSSSKVFVFPEPDGRFK VDHVSDPHASIRTSPPPISDAVIPPGALISPPESANNSSDEEAAYPSQDGLQLKRLEAAVRSIEQRRVSSPERQS SEVQPSSSMAAIAGGPVQPPRPPLSREARKISHSRSVTETSIDRRQEEALTSSPEESDRDDEPPVRHPMVRKKSG ELVRPALRPPSARRRPSSMPGTPTYAKAVHFDAQLEHIRHFLQLDKPQAVSADTSPVEDFDTAEEFPFKKGHRDM PAFEWELGLSNFPKDSSSRAKQRVRLERLHLSLDKNTMIGVVGVANLAFHKHVAARFTLDNWKTVSEVSAEYNDD PRRKPILDGYDRFAFSIRLDDQANLERKTMFICIRYNVAGEEYWDNNNSENYQVNFRRVPKEMPQAQAPPTRPRT NLPRSRSFAGSISRPHSMPPSFDALSEMDKYISFGNPPTNGKKEHLADDDPHDVELVAPIRRDKQNHQVFGNRYD FEASLTAAMRTKPTHDRTTLTARAKSKLPSHGSHSHSSERRTSQREENAPLPSRGSQQPGSPDHHKPSTIVSGKP HRESSVYKELVDKYCFFGSGSMNYPNGAVGPVTASPDYETRSGSSSSSSSVSPCSSPRMDAVYGGDSRHSPAAPS SPNHIGYGYLQPMQNSFMKDTQTPAIIQG* |
Coding | >Ani_SJS72_1|g5279.t1 ATGCCATACACTGCGCCGTTGAAGACGTCGCCTTCTGCGCAGCACATTGAACACTCTGAACTCACTCCACAATCC TGTCCTAGCTCCCCCACCGCTGTCGTCTCTCACCCTCAACGCCAGCATTTGCCTCGTTCGTATTCTTCCACCTCT TATGTGCGAAGGCACCGACGAAGCCCTTCGAGTAGCAAGGTGTTTGTCTTTCCAGAGCCCGACGGTCGTTTCAAA GTGGATCATGTCAGCGACCCGCATGCCAGTATTCGAACGTCGCCACCTCCCATAAGTGATGCTGTCATCCCTCCT GGGGCTTTGATCTCACCACCTGAATCTGCCAACAATTCAAGTGATGAAGAGGCGGCGTACCCATCTCAGGACGGG CTCCAGCTGAAGAGATTGGAGGCTGCGGTGAGGTCCATTGAACAGAGACGAGTATCGTCACCGGAGAGGCAGTCG TCGGAGGTTCAGCCCTCATCGAGCATGGCAGCCATTGCTGGTGGCCCAGTCCAACCTCCACGACCCCCCCTCTCC AGAGAGGCTCGCAAAATATCCCACTCTCGATCGGTTACAGAAACCTCAATTGACCGTAGGCAGGAGGAGGCTTTG ACTAGCTCTCCAGAAGAAAGTGACAGAGATGATGAGCCCCCGGTCAGGCATCCCATGGTCCGCAAGAAGTCTGGG GAACTGGTGAGGCCAGCCCTTCGCCCACCTTCGGCTCGGCGGCGCCCATCTAGCATGCCGGGGACTCCAACTTAC GCAAAGGCTGTTCACTTCGACGCTCAGCTGGAACATATTCGTCATTTTCTACAATTGGATAAGCCTCAAGCCGTG AGTGCCGACACATCACCAGTGGAGGACTTTGACACAGCAGAGGAATTTCCGTTCAAGAAGGGTCATCGGGACATG CCCGCTTTTGAGTGGGAGCTGGGTCTGTCGAACTTCCCCAAAGACAGCTCCTCTCGGGCTAAGCAACGCGTTCGA TTGGAACGCCTGCACTTGTCTCTAGATAAAAACACCATGATCGGAGTCGTTGGGGTCGCCAACCTGGCTTTCCAC AAGCACGTTGCCGCTCGGTTCACTCTTGATAATTGGAAGACTGTTTCTGAAGTCTCCGCTGAGTACAATGACGAC CCTCGACGAAAGCCTATTCTGGATGGCTATGATAGGTTTGCTTTTAGTATCCGGCTGGATGATCAGGCAAATTTG GAGAGGAAAACCATGTTTATCTGCATTCGCTACAATGTTGCTGGAGAGGAGTATTGGGACAACAACAACTCAGAA AACTACCAAGTCAACTTTCGCAGAGTACCAAAAGAAATGCCCCAGGCCCAGGCTCCACCCACGCGTCCTCGTACA AATTTGCCGAGGAGCAGGAGCTTTGCTGGATCTATCAGCCGCCCACACTCAATGCCGCCTTCATTTGATGCGTTG TCTGAGATGGACAAGTACATTTCGTTTGGCAACCCACCAACAAATGGCAAGAAGGAGCATTTGGCTGATGATGAT CCGCATGACGTTGAATTGGTTGCTCCGATCCGTCGCGATAAGCAAAACCACCAGGTGTTTGGGAATCGCTACGAT TTCGAAGCCTCATTGACGGCAGCTATGCGGACCAAGCCTACTCACGATCGCACGACATTGACAGCTCGAGCAAAG TCGAAACTTCCGTCGCATGGTAGTCATAGCCATTCGTCGGAACGGAGAACAAGCCAGAGGGAGGAGAACGCGCCT TTGCCTAGCAGAGGTAGCCAGCAGCCGGGGTCCCCAGACCACCATAAACCCTCTACCATCGTTTCTGGCAAGCCG CATCGCGAGTCGTCGGTGTACAAAGAGTTGGTTGATAAATACTGCTTCTTCGGATCCGGATCGATGAATTACCCA AATGGTGCAGTTGGTCCTGTCACGGCAAGTCCGGACTATGAGACCCGGTCGGGCTCTAGTAGCAGTTCCAGCTCG GTGTCTCCATGCTCATCTCCTCGGATGGATGCGGTTTATGGTGGCGATTCTCGACACTCTCCTGCCGCCCCATCG TCACCGAACCATATCGGATATGGATACCTTCAGCCTATGCAGAACAGTTTTATGAAGGATACGCAGACACCTGCT ATCATCCAAGGATGA |
Transcript | >Ani_SJS72_1|g5279.t1 ATGCCATACACTGCGCCGTTGAAGACGTCGCCTTCTGCGCAGCACATTGAACACTCTGAACTCACTCCACAATCC TGTCCTAGCTCCCCCACCGCTGTCGTCTCTCACCCTCAACGCCAGCATTTGCCTCGTTCGTATTCTTCCACCTCT TATGTGCGAAGGCACCGACGAAGCCCTTCGAGTAGCAAGGTGTTTGTCTTTCCAGAGCCCGACGGTCGTTTCAAA GTGGATCATGTCAGCGACCCGCATGCCAGTATTCGAACGTCGCCACCTCCCATAAGTGATGCTGTCATCCCTCCT GGGGCTTTGATCTCACCACCTGAATCTGCCAACAATTCAAGTGATGAAGAGGCGGCGTACCCATCTCAGGACGGG CTCCAGCTGAAGAGATTGGAGGCTGCGGTGAGGTCCATTGAACAGAGACGAGTATCGTCACCGGAGAGGCAGTCG TCGGAGGTTCAGCCCTCATCGAGCATGGCAGCCATTGCTGGTGGCCCAGTCCAACCTCCACGACCCCCCCTCTCC AGAGAGGCTCGCAAAATATCCCACTCTCGATCGGTTACAGAAACCTCAATTGACCGTAGGCAGGAGGAGGCTTTG ACTAGCTCTCCAGAAGAAAGTGACAGAGATGATGAGCCCCCGGTCAGGCATCCCATGGTCCGCAAGAAGTCTGGG GAACTGGTGAGGCCAGCCCTTCGCCCACCTTCGGCTCGGCGGCGCCCATCTAGCATGCCGGGGACTCCAACTTAC GCAAAGGCTGTTCACTTCGACGCTCAGCTGGAACATATTCGTCATTTTCTACAATTGGATAAGCCTCAAGCCGTG AGTGCCGACACATCACCAGTGGAGGACTTTGACACAGCAGAGGAATTTCCGTTCAAGAAGGGTCATCGGGACATG CCCGCTTTTGAGTGGGAGCTGGGTCTGTCGAACTTCCCCAAAGACAGCTCCTCTCGGGCTAAGCAACGCGTTCGA TTGGAACGCCTGCACTTGTCTCTAGATAAAAACACCATGATCGGAGTCGTTGGGGTCGCCAACCTGGCTTTCCAC AAGCACGTTGCCGCTCGGTTCACTCTTGATAATTGGAAGACTGTTTCTGAAGTCTCCGCTGAGTACAATGACGAC CCTCGACGAAAGCCTATTCTGGATGGCTATGATAGGTTTGCTTTTAGTATCCGGCTGGATGATCAGGCAAATTTG GAGAGGAAAACCATGTTTATCTGCATTCGCTACAATGTTGCTGGAGAGGAGTATTGGGACAACAACAACTCAGAA AACTACCAAGTCAACTTTCGCAGAGTACCAAAAGAAATGCCCCAGGCCCAGGCTCCACCCACGCGTCCTCGTACA AATTTGCCGAGGAGCAGGAGCTTTGCTGGATCTATCAGCCGCCCACACTCAATGCCGCCTTCATTTGATGCGTTG TCTGAGATGGACAAGTACATTTCGTTTGGCAACCCACCAACAAATGGCAAGAAGGAGCATTTGGCTGATGATGAT CCGCATGACGTTGAATTGGTTGCTCCGATCCGTCGCGATAAGCAAAACCACCAGGTGTTTGGGAATCGCTACGAT TTCGAAGCCTCATTGACGGCAGCTATGCGGACCAAGCCTACTCACGATCGCACGACATTGACAGCTCGAGCAAAG TCGAAACTTCCGTCGCATGGTAGTCATAGCCATTCGTCGGAACGGAGAACAAGCCAGAGGGAGGAGAACGCGCCT TTGCCTAGCAGAGGTAGCCAGCAGCCGGGGTCCCCAGACCACCATAAACCCTCTACCATCGTTTCTGGCAAGCCG CATCGCGAGTCGTCGGTGTACAAAGAGTTGGTTGATAAATACTGCTTCTTCGGATCCGGATCGATGAATTACCCA AATGGTGCAGTTGGTCCTGTCACGGCAAGTCCGGACTATGAGACCCGGTCGGGCTCTAGTAGCAGTTCCAGCTCG GTGTCTCCATGCTCATCTCCTCGGATGGATGCGGTTTATGGTGGCGATTCTCGACACTCTCCTGCCGCCCCATCG TCACCGAACCATATCGGATATGGATACCTTCAGCCTATGCAGAACAGTTTTATGAAGGATACGCAGACACCTGCT ATCATCCAAGGATGA |
Gene | >Ani_SJS72_1|g5279.t1 ATGCCATACACTGCGCCGTTGAAGACGTCGCCTTCTGCGCAGCACATTGAACACTCTGAACTCACTCCACAATCC TGTCCTAGCTCCCCCACCGCTGTCGTCTCTCACCCTCAACGCCAGCATTTGCCTCGTTCGTATTCTTCCACCTCT TATGTGCGAAGGCACCGACGAAGCCCTTCGAGTAGCAAGGTGTTTGTCTTTCCAGAGCCCGACGGTCGTTTCAAA GTGGATCATGTCAGCGACCCGCATGCCAGTATTCGAACGTCGCCACCTCCCATAAGTGATGCTGTCATCCCTCCT GGGGCTTTGATCTCACCACCTGAATCTGCCAACAATTCAAGTGATGAAGAGGCGGCGTACCCATCTCAGGACGGG CTCCAGCTGAAGAGATTGGAGGCTGCGGTGAGGTCCATTGAACAGAGACGAGTATCGTCACCGGAGAGGCAGTCG TCGGAGGTTCAGCCCTCATCGAGCATGGCAGCCATTGCTGGTGGCCCAGTCCAACCTCCACGACCCCCCCTCTCC AGAGAGGCTCGCAAAATATCCCACTCTCGATCGGTTACAGAAACCTCAATTGACCGTAGGCAGGAGGAGGCTTTG ACTAGCTCTCCAGAAGAAAGTGACAGAGATGATGAGCCCCCGGTCAGGCATCCCATGGTCCGCAAGAAGTCTGGG GAACTGGTGAGGCCAGCCCTTCGCCCACCTTCGGCTCGGCGGCGCCCATCTAGCATGCCGGGGACTCCAACTTAC GCAAAGGCTGTTCACTTCGACGCTCAGCTGGAACATATTCGTCATTTTCTACAATTGGATAAGCCTCAAGCCGTG AGTGCCGACACATCACCAGTGGAGGACTTTGACACAGCAGAGGAATTTCCGTTCAAGAAGGGTCATCGGGACATG CCCGCTTTTGAGTGGGAGCTGGGTCTGTCGAACTTCCCCAAAGACAGCTCCTCTCGGGCTAAGCAACGCGTTCGA TTGGAACGCCTGCACTTGTCTCTAGATAAAAACACCATGATCGGAGTCGTTGGGGTCGCCAACCTGGCTTTCCAC AAGCACGTTGCCGCTCGGTTCACTCTTGATAATTGGAAGACTGTTTCTGAAGTCTCCGCTGAGTACAATGACGAC CCTCGACGAAAGCCTATTCTGGATGGCTATGATAGGTTTGCTTTTAGTATCCGGCTGGATGATCAGGCAAATTTG GAGAGGAAAACCATGTTTATCTGCATTCGCTACAATGTTGCTGGAGAGGAGTATTGGGACAACAACAACTCAGAA AACTACCAAGTCAACTTTCGCAGAGTACCAAAAGAAATGCCCCAGGCCCAGGCTCCACCCACGCGTCCTCGTACA AATTTGCCGAGGAGCAGGAGCTTTGCTGGATCTATCAGCCGCCCACACTCAATGCCGCCTTCATTTGATGCGTTG TCTGAGATGGACAAGTACATTTCGTTTGGCAACCCACCAACAAATGGCAAGAAGGAGCATTTGGCTGATGATGAT CCGCATGACGTTGAATTGGTTGCTCCGATCCGTCGCGATAAGCAAAACCACCAGGTGTTTGGGAATCGCTACGAT TTCGAAGCCTCATTGACGGCAGCTATGCGGACCAAGCCTACTCACGATCGCACGACATTGACAGCTCGAGCAAAG TCGAAACTTCCGTCGCATGGTAGTCATAGCCATTCGTCGGAACGGAGAACAAGCCAGAGGGAGGAGAACGCGCCT TTGCCTAGCAGAGGTAGCCAGCAGCCGGGGTCCCCAGACCACCATAAACCCTCTACCATCGTTTCTGGCAAGCCG CATCGCGAGTCGTCGGTGTACAAAGAGTTGGTTGATAAATACTGCTTCTTCGGATCCGGATCGATGAATTACCCA AATGGTGCAGTTGGTCCTGTCACGGCAAGTCCGGACTATGAGACCCGGTCGGGCTCTAGTAGCAGTTCCAGCTCG GTGTCTCCATGCTCATCTCCTCGGATGGATGCGGTTTATGGTGGCGATTCTCGACACTCTCCTGCCGCCCCATCG TCACCGAACCATATCGGATATGGATACCTTCAGCCTATGCAGAACAGTTTTATGAAGGATACGCAGACACCTGCT ATCATCCAAGGATGA |