© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g5250.t1 |
| Gene name | |
| Location | scaffold_035:191632..192762 |
| Strand | - |
| Gene length (bp) | 1130 |
| Transcript length (bp) | 1071 |
| Coding sequence length (bp) | 1071 |
| Protein length (aa) | 357 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13632 | Glyco_trans_2_3 | Glycosyl transferase family group 2 | 9.4E-09 | 11 | 145 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 12 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 109 | 128 | 19 |
| 2 | 138 | 159 | 21 |
| 3 | 232 | 254 | 22 |
| 4 | 269 | 291 | 22 |
| 5 | 332 | 354 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g5250.t1 MNEMGTSIASTTGCVMRRDLAVKVGGFPTINEVEDITLSMILPAYGKRVVAVDEMLQLGRVPSSLEGHVRQNRRW ITGLTQMIATPWAPSRQSIPISSRYYMALFGIQWLWSPLSQCVGCAIIAPALISRQALVPPHLLQVQIPLSLVAF GLVFLYEWLKAAATGFRLSAFAHFYDLWLCADRLYTLIQYHILGSQAGRSLVTGSAENNWNNPTKVPTRVRQLKR DLWDSGVGFNVLFVFGVLAGIFHSVLGAIERYPDWHFHTMTTLLYPPVVLMCYISLTCHLVPLLCVMWPPQYPPR RAVLETHPSDPRAVFPSEAVRQYNVRQRHAPLGYRRHLVLIPVYVTFMTMFYYFYL* |
| Coding | >Ani_SJS72_1|g5250.t1 ATGAACGAAATGGGGACGAGTATAGCATCAACTACAGGATGTGTTATGCGCCGCGATCTAGCCGTCAAAGTGGGC GGATTCCCGACTATAAACGAAGTGGAGGATATCACTCTATCGATGATTTTGCCAGCGTATGGGAAGCGCGTCGTA GCCGTCGATGAAATGCTGCAGCTTGGACGCGTGCCATCCTCGTTGGAAGGTCATGTCCGGCAGAACCGACGATGG ATCACTGGCTTGACACAGATGATCGCAACTCCCTGGGCACCATCCAGGCAGTCTATCCCGATTTCGTCGAGATAC TACATGGCATTATTTGGTATTCAGTGGCTTTGGTCACCTCTGAGTCAGTGTGTCGGTTGTGCAATAATCGCTCCT GCGTTAATATCACGCCAAGCGCTTGTGCCACCCCATTTACTCCAGGTCCAGATCCCATTATCCCTGGTAGCTTTC GGACTCGTTTTCCTGTACGAATGGCTCAAGGCTGCAGCAACGGGGTTTCGATTGTCTGCATTTGCTCATTTCTAT GATCTGTGGTTATGTGCAGACCGACTGTATACTCTCATTCAATATCATATTCTCGGGTCACAGGCCGGTAGGTCC TTGGTGACTGGCAGTGCCGAGAACAACTGGAACAATCCCACCAAGGTCCCCACGCGAGTGAGACAGTTGAAAAGG GATCTATGGGATTCCGGGGTCGGCTTCAACGTCCTTTTCGTGTTTGGTGTCCTCGCGGGAATCTTCCATTCGGTA CTGGGCGCCATCGAGAGATATCCCGACTGGCATTTTCATACGATGACCACCTTGCTGTACCCTCCTGTTGTTCTT ATGTGCTACATAAGTCTTACCTGTCACCTAGTCCCACTGTTATGCGTGATGTGGCCGCCTCAGTATCCTCCTCGG AGAGCAGTCCTAGAAACTCATCCGAGTGACCCCCGTGCCGTATTCCCCTCGGAGGCAGTTCGACAATACAACGTG CGCCAGAGGCATGCGCCTCTCGGTTATCGTCGACATCTAGTATTAATCCCGGTTTATGTCACGTTCATGACCATG TTTTATTATTTCTATCTGTGA |
| Transcript | >Ani_SJS72_1|g5250.t1 ATGAACGAAATGGGGACGAGTATAGCATCAACTACAGGATGTGTTATGCGCCGCGATCTAGCCGTCAAAGTGGGC GGATTCCCGACTATAAACGAAGTGGAGGATATCACTCTATCGATGATTTTGCCAGCGTATGGGAAGCGCGTCGTA GCCGTCGATGAAATGCTGCAGCTTGGACGCGTGCCATCCTCGTTGGAAGGTCATGTCCGGCAGAACCGACGATGG ATCACTGGCTTGACACAGATGATCGCAACTCCCTGGGCACCATCCAGGCAGTCTATCCCGATTTCGTCGAGATAC TACATGGCATTATTTGGTATTCAGTGGCTTTGGTCACCTCTGAGTCAGTGTGTCGGTTGTGCAATAATCGCTCCT GCGTTAATATCACGCCAAGCGCTTGTGCCACCCCATTTACTCCAGGTCCAGATCCCATTATCCCTGGTAGCTTTC GGACTCGTTTTCCTGTACGAATGGCTCAAGGCTGCAGCAACGGGGTTTCGATTGTCTGCATTTGCTCATTTCTAT GATCTGTGGTTATGTGCAGACCGACTGTATACTCTCATTCAATATCATATTCTCGGGTCACAGGCCGGTAGGTCC TTGGTGACTGGCAGTGCCGAGAACAACTGGAACAATCCCACCAAGGTCCCCACGCGAGTGAGACAGTTGAAAAGG GATCTATGGGATTCCGGGGTCGGCTTCAACGTCCTTTTCGTGTTTGGTGTCCTCGCGGGAATCTTCCATTCGGTA CTGGGCGCCATCGAGAGATATCCCGACTGGCATTTTCATACGATGACCACCTTGCTGTACCCTCCTGTTGTTCTT ATGTGCTACATAAGTCTTACCTGTCACCTAGTCCCACTGTTATGCGTGATGTGGCCGCCTCAGTATCCTCCTCGG AGAGCAGTCCTAGAAACTCATCCGAGTGACCCCCGTGCCGTATTCCCCTCGGAGGCAGTTCGACAATACAACGTG CGCCAGAGGCATGCGCCTCTCGGTTATCGTCGACATCTAGTATTAATCCCGGTTTATGTCACGTTCATGACCATG TTTTATTATTTCTATCTGTGA |
| Gene | >Ani_SJS72_1|g5250.t1 ATGAACGAAATGGGGACGAGTATAGCATCAACTACAGGATGTGTTATGCGCCGCGATCTAGCCGTCAAAGTGGGC GGATTCCCGACTATAAACGAAGTGGAGGATATCACTCTATCGATGATTTTGCCAGCGTATGGGAAGCGCGTCGTA GCCGTCGATGAAATGCTGCAGCTTGGACGCGTGCCATCCTCGTTGGAAGGTCATGTCCGGCAGAACCGACGATGG ATCACTGGCTTGACACAGATGATCGCAACTCCCTGGGCACCATCCAGGCAGTCTATCCCGATTTCGTCGAGATAC TACATGGCATTATTTGGTATTCAGTGGCTTTGGTCACCTCTGAGTCAGTGTGTCGGTTGTGCAATAATCGCTCCT GCGTTAATATCACGCCAAGCGCTTGTGCCACCCCATTTACTCCAGGTCCAGATCCCATTATCCCTGGTAGCTTTC GGACTCGTTTTCCTGTACGAATGGCTCAAGGCTGCAGCAACGGGGTTTCGATTGTCTGCATTTGCTCATTTCTAT GATCTGTGGTTATGTGCAGGTAGGTCTGCCGTCTATCAACCCGATATGGTAGATACAACGTACTAACAGCCGCCA AAGACCGACTGTATACTCTCATTCAATATCATATTCTCGGGTCACAGGCCGGTAGGTCCTTGGTGACTGGCAGTG CCGAGAACAACTGGAACAATCCCACCAAGGTCCCCACGCGAGTGAGACAGTTGAAAAGGGATCTATGGGATTCCG GGGTCGGCTTCAACGTCCTTTTCGTGTTTGGTGTCCTCGCGGGAATCTTCCATTCGGTACTGGGCGCCATCGAGA GATATCCCGACTGGCATTTTCATACGATGACCACCTTGCTGTACCCTCCTGTTGTTCTTATGTGCTACATAAGTC TTACCTGTCACCTAGTCCCACTGTTATGCGTGATGTGGCCGCCTCAGTATCCTCCTCGGAGAGCAGTCCTAGAAA CTCATCCGAGTGACCCCCGTGCCGTATTCCCCTCGGAGGCAGTTCGACAATACAACGTGCGCCAGAGGCATGCGC CTCTCGGTTATCGTCGACATCTAGTATTAATCCCGGTTTATGTCACGTTCATGACCATGTTTTATTATTTCTATC TGTGA |