© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g5196.t1 |
| Gene name | |
| Location | scaffold_035:6996..8707 |
| Strand | + |
| Gene length (bp) | 1711 |
| Transcript length (bp) | 1488 |
| Coding sequence length (bp) | 1488 |
| Protein length (aa) | 496 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00999 | Na_H_Exchanger | Sodium/hydrogen exchanger family | 1.3E-34 | 19 | 464 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0015299 | solute:proton antiporter activity | Yes |
| GO:0006812 | cation transport | Yes |
| GO:0006811 | ion transport | No |
| GO:0009987 | cellular process | No |
| GO:0051234 | establishment of localization | No |
| GO:0008150 | biological_process | No |
| GO:0022804 | active transmembrane transporter activity | No |
| GO:0015297 | antiporter activity | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0003674 | molecular_function | No |
| GO:0005215 | transporter activity | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0051179 | localization | No |
| GO:0006810 | transport | No |
| GO:0022857 | transmembrane transporter activity | No |
| GO:0015298 | solute:cation antiporter activity | No |
| GO:0015291 | secondary active transmembrane transporter activity | No |
| GO:0005575 | cellular_component | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 30 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 10 | 32 | 22 |
| 2 | 39 | 61 | 22 |
| 3 | 66 | 88 | 22 |
| 4 | 95 | 117 | 22 |
| 5 | 132 | 154 | 22 |
| 6 | 161 | 183 | 22 |
| 7 | 205 | 227 | 22 |
| 8 | 248 | 270 | 22 |
| 9 | 320 | 342 | 22 |
| 10 | 349 | 371 | 22 |
| 11 | 440 | 462 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g5196.t1 MAGGFLPYHEPGIVNILILISFFFFLSLAEWISSKIIRAGIIGQIAVGIIYGTPLANILHADWQSTFLALGYIGL ILIIFEGGLGARLDLLKKNFFLSMIGAATGVLFPIGLSYLLLYLGFGYGAVETFIVGASLSATSLGTTFAVISTA SSTVDLAQTRVGSILVSAAVIDDVVGLVMLSVINDLGELGQGHSVNLGWLIGRPIVASIGMAIVTPLVTKFLFAP LFRRYIEYHFARFDHISNIILMILVLCAFISIAAYTGTSILFGAFLAGTFLTYIPSKHPDGPFVVMSREEGEREE NKSPTFVHTFERYLLDVQKYLMEPLFFSSIGFAIPFVQLWTGKRIWRGIVFTLLMLFAKLIVGIWVPLWQLLSGS NILSRKVAKEYPREEYHSDESTKPVWSTVCLSGLLLGSAMVARGEIGLLIVEVGYNETSYVSEDAFITAVWAILL NTVLGPVTVGLLMKFHGKEIGEGAWGLQGTAPAAGDDSSIDPSLG* |
| Coding | >Ani_SJS72_1|g5196.t1 ATGGCTGGAGGTTTCCTCCCATATCACGAACCAGGCATTGTCAACATTCTCATCCTAATCTCCTTCTTTTTCTTC CTCTCACTAGCGGAATGGATCTCCTCCAAAATCATCCGCGCCGGCATCATTGGCCAGATCGCCGTCGGTATCATC TACGGAACGCCACTGGCAAACATCCTGCATGCAGACTGGCAATCCACTTTCCTTGCTCTAGGTTATATCGGCTTA ATACTCATCATCTTTGAAGGCGGGCTAGGAGCCCGTCTTGACCTCCTGAAGAAGAATTTCTTCTTGAGTATGATT GGCGCTGCAACAGGGGTTCTATTTCCGATCGGACTTTCTTACCTGCTCTTGTACTTGGGATTCGGTTATGGTGCT GTTGAAACCTTCATCGTGGGAGCATCTTTGTCTGCTACTTCTCTCGGCACTACCTTTGCTGTTATTTCAACCGCT TCCAGCACGGTCGATCTCGCCCAAACTCGCGTCGGATCGATCCTCGTAAGCGCAGCTGTCATTGACGACGTTGTC GGTCTGGTAATGCTAAGCGTCATCAATGATCTGGGCGAACTAGGCCAAGGCCACTCTGTCAATCTAGGCTGGCTA ATTGGCCGCCCGATTGTAGCCTCCATCGGCATGGCTATTGTAACCCCTCTGGTAACAAAATTCCTCTTTGCGCCG CTCTTCCGCCGCTATATCGAGTATCACTTCGCTCGATTCGACCACATCTCCAACATCATCCTGATGATCTTGGTC CTCTGCGCATTTATCAGCATTGCCGCGTATACGGGGACTTCCATCCTCTTTGGTGCGTTCCTGGCTGGTACATTC CTGACTTATATTCCCAGTAAGCACCCAGATGGACCGTTTGTAGTCATGAGCCGAGAGGAAGGCGAAAGAGAGGAG AATAAGAGTCCGACATTTGTACACACTTTCGAGCGGTACCTGCTGGATGTGCAGAAGTATCTTATGGAGCCTCTC TTCTTTTCGAGTATCGGGTTCGCTATCCCCTTTGTGCAGCTTTGGACAGGGAAGAGGATATGGAGGGGTATTGTC TTTACTCTTCTGATGCTTTTTGCAAAGCTCATCGTTGGAATCTGGGTCCCACTTTGGCAATTACTATCCGGTTCC AACATCCTGAGCAGAAAAGTAGCAAAAGAGTATCCTAGGGAAGAATATCACAGCGACGAGAGCACAAAACCAGTC TGGTCTACAGTCTGTCTCTCCGGCCTACTTCTCGGCTCGGCAATGGTTGCCCGCGGCGAGATCGGCCTCCTCATT GTCGAGGTCGGGTACAATGAGACTTCATACGTGAGTGAGGACGCCTTTATTACCGCCGTATGGGCGATTCTGCTT AACACGGTCCTTGGTCCTGTAACTGTGGGGCTGCTGATGAAGTTTCATGGAAAGGAGATAGGGGAGGGGGCATGG GGGCTTCAGGGGACTGCTCCTGCTGCTGGTGACGATTCAAGTATTGATCCCTCACTTGGGTGA |
| Transcript | >Ani_SJS72_1|g5196.t1 ATGGCTGGAGGTTTCCTCCCATATCACGAACCAGGCATTGTCAACATTCTCATCCTAATCTCCTTCTTTTTCTTC CTCTCACTAGCGGAATGGATCTCCTCCAAAATCATCCGCGCCGGCATCATTGGCCAGATCGCCGTCGGTATCATC TACGGAACGCCACTGGCAAACATCCTGCATGCAGACTGGCAATCCACTTTCCTTGCTCTAGGTTATATCGGCTTA ATACTCATCATCTTTGAAGGCGGGCTAGGAGCCCGTCTTGACCTCCTGAAGAAGAATTTCTTCTTGAGTATGATT GGCGCTGCAACAGGGGTTCTATTTCCGATCGGACTTTCTTACCTGCTCTTGTACTTGGGATTCGGTTATGGTGCT GTTGAAACCTTCATCGTGGGAGCATCTTTGTCTGCTACTTCTCTCGGCACTACCTTTGCTGTTATTTCAACCGCT TCCAGCACGGTCGATCTCGCCCAAACTCGCGTCGGATCGATCCTCGTAAGCGCAGCTGTCATTGACGACGTTGTC GGTCTGGTAATGCTAAGCGTCATCAATGATCTGGGCGAACTAGGCCAAGGCCACTCTGTCAATCTAGGCTGGCTA ATTGGCCGCCCGATTGTAGCCTCCATCGGCATGGCTATTGTAACCCCTCTGGTAACAAAATTCCTCTTTGCGCCG CTCTTCCGCCGCTATATCGAGTATCACTTCGCTCGATTCGACCACATCTCCAACATCATCCTGATGATCTTGGTC CTCTGCGCATTTATCAGCATTGCCGCGTATACGGGGACTTCCATCCTCTTTGGTGCGTTCCTGGCTGGTACATTC CTGACTTATATTCCCAGTAAGCACCCAGATGGACCGTTTGTAGTCATGAGCCGAGAGGAAGGCGAAAGAGAGGAG AATAAGAGTCCGACATTTGTACACACTTTCGAGCGGTACCTGCTGGATGTGCAGAAGTATCTTATGGAGCCTCTC TTCTTTTCGAGTATCGGGTTCGCTATCCCCTTTGTGCAGCTTTGGACAGGGAAGAGGATATGGAGGGGTATTGTC TTTACTCTTCTGATGCTTTTTGCAAAGCTCATCGTTGGAATCTGGGTCCCACTTTGGCAATTACTATCCGGTTCC AACATCCTGAGCAGAAAAGTAGCAAAAGAGTATCCTAGGGAAGAATATCACAGCGACGAGAGCACAAAACCAGTC TGGTCTACAGTCTGTCTCTCCGGCCTACTTCTCGGCTCGGCAATGGTTGCCCGCGGCGAGATCGGCCTCCTCATT GTCGAGGTCGGGTACAATGAGACTTCATACGTGAGTGAGGACGCCTTTATTACCGCCGTATGGGCGATTCTGCTT AACACGGTCCTTGGTCCTGTAACTGTGGGGCTGCTGATGAAGTTTCATGGAAAGGAGATAGGGGAGGGGGCATGG GGGCTTCAGGGGACTGCTCCTGCTGCTGGTGACGATTCAAGTATTGATCCCTCACTTGGGTGA |
| Gene | >Ani_SJS72_1|g5196.t1 ATGGCTGGAGGTTTCCTCCCATATCACGAACCAGGCAGTACGTTGACGATGCCTTCACCACTGCCATTATCATTA AAAACTGACCACATCAGTTGTCAACATTCTCATCCTAATCTCCTTCTTTTTCTTCCTCTCACTAGCGGAATGGAT CTCCTCCAAAATCATCCGCGCCGGCATCATTGGCCAGATCGCCGTCGGTATCATCTACGGAACGCCACTGGCAAA CATCCTGCATGCAGACTGGCAATCCACTTTCCTTGCTCTAGGTTATATCGGCTTAATACTCATCATCTTTGAAGG CGGGCTAGGAGCCCGTCTTGACCTCCTGAAGAAGAATTTCTTCTTGAGTATGATTGGCGCTGCAACAGGGGTTCT ATTTCCGATCGGACTTTCTTACCTGCTCTTGTACTTGGGATTCGGTTATGGTGAGTATGCGTTACTCGATTAGGA CTCTCAAAAGTGACACATCCCGGCAGGTGCTGTTGAAACCTTCATCGTGGGAGCATCTTTGTCTGCTACTTCTCT CGGCACTACCTTTGCTGTTATTTCAACCGCTTCCAGCACGGTCGATCTCGCCCAAACTCGCGTCGGATCGATCCT CGTAAGCGCAGCTGTCATTGACGACGTTGTCGGTCTGGTAATGCTAAGGTAGATGACATACTTGCCTGAAACCCA CCTTCATCACGGTTTAACTCATTTGATACAGCGTCATCAATGATCTGGGCGAACTAGGCCAAGGCCACTCTGTCA ATCTAGGCTGGCTAATTGGCCGCCCGATTGTAGCCTCCATCGGCATGGCTATTGTAACCCCTCTGGTAACAAAAT TCCTCTTTGCGCCGCTCTTCCGCCGCTATATCGAGTATCACTTCGCTCGATTCGACCACATCTCCAACATCATCC TGATGATCTTGGTCCTCTGCGCATTTATCAGCATTGCCGCGTATACGGGGACTTCCATCCTCTTTGGTGCGTTCC TGGCTGGTACATTCCTGACTTATATTCCCAGTAAGCACCCAGATGGACCGTTTGTAGTCATGAGCCGAGAGGAAG GCGAAAGAGAGGAGAATAAGAGTCCGACATTTGTACACACTTTCGAGCGGTACCTGCTGGATGTGCAGAAGTATC TTATGGAGCCTCTCTTCTTTTCGAGTATCGGGTTCGCTATCCCCTTTGTGCAGCTTTGGACAGGGAAGAGGATAT GGAGGGGTATTGTCTTTACTCTTCTGATGCTTTTTGCAAAGGTATTCACTTTCCACTCTCGCTAATTTTGTCTCT AACATGACAACTAACAATGAACCAGCTCATCGTTGGAATCTGGGTCCCACTTTGGCAATTACTATCCGGTTCCAA CATCCTGAGCAGAAAAGTAGCAAAAGAGTATCCTAGGGAAGAATATCACAGCGACGAGAGCACAAAACCAGTCTG GTCTACAGTCTGTCTCTCCGGCCTACTTCTCGGCTCGGCAATGGTTGCCCGCGGCGAGATCGGCCTCCTCATTGT CGAGGTCGGGTACAATGAGACTTCATACGTGAGTGAGGACGCCTTTATTACCGCCGTATGGGCGATTCTGCTTAA CACGGTCCTTGGTCCTGTAACTGTGGGGCTGCTGATGAAGTTTCATGGAAAGGAGATAGGGGAGGGGGCATGGGG GCTTCAGGGGACTGCTCCTGCTGCTGGTGACGATTCAAGTATTGATCCCTCACTTGGGTGA |