Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS72_1|g5168.t1
Gene name
Locationscaffold_034:244719..246104
Strand+
Gene length (bp)1385
Transcript length (bp)1317
Coding sequence length (bp)1317
Protein length (aa) 439

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00293 NUDIX NUDIX domain 5.8E-11 79 196

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 34 0.45

Transmembrane Domains

Domain # Start End Length
1 409 431 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS72_1|g5168.t1
MSSSLAPSLHDVLSDLHHRPYPHVPNPPSCKKRASVALILRVRPTYHHWPNSSSLSASDVSASVPQRLETFFAQD
WVQNGEPEALFIKRASRVGDRWTGHVALPGGKRDPEDVDDKAAAIREAVEEIGLDLTTSECIHVGNLPERVVTSS
WGTVPLMVLCPYVFLLTSSDSPTLRLQPTEVASTHWVPLRALLSSSLRTVEHVDMTQRLANMGGLLARLAYRSMM
GYMQFSAIRLAPTESLQCNSTPGYIPEGNQPSTSLVQRWKSWCLGSQTHSGHQDQPLLLWGLTLGIMADFLDMLP
PHTAVQLWKYPNFTAIDLRFIINVLTYRLRKHNRSQVRSGARPSNTAVDSQTAALPVTKTAATNADAEHNQVGIG
GLGVGRYFGSSDTDPTGHAYAVGIMLRGYYERVRIAIYIIVAWRIALGSTAAIYAWKLLRRLK*
Coding >Ani_SJS72_1|g5168.t1
ATGTCCTCCTCGTTGGCCCCGTCGCTTCATGACGTCCTGTCAGACTTGCACCACCGTCCATATCCCCATGTCCCC
AATCCGCCCTCGTGTAAGAAACGTGCCTCCGTCGCTTTGATCCTCCGTGTCCGTCCCACATACCACCACTGGCCC
AATTCCTCGTCTCTCTCTGCTTCAGATGTTTCCGCCTCCGTTCCGCAACGACTGGAGACGTTCTTCGCACAGGAC
TGGGTCCAGAATGGAGAACCGGAAGCTCTCTTTATCAAACGAGCATCGCGCGTAGGCGATCGCTGGACTGGCCAT
GTCGCCCTGCCAGGAGGAAAACGGGACCCAGAAGATGTCGACGATAAAGCTGCCGCAATTCGAGAAGCCGTGGAA
GAGATCGGACTGGACTTGACAACGAGTGAATGTATCCATGTGGGAAATTTACCAGAGAGAGTAGTGACTTCAAGT
TGGGGAACAGTACCTTTAATGGTTCTCTGTCCTTATGTCTTCTTGTTAACGTCCAGTGATTCGCCCACCCTCCGA
TTACAGCCTACGGAAGTCGCTTCGACCCATTGGGTACCCCTCAGAGCCCTGCTCTCCTCATCCCTGAGAACGGTG
GAACATGTGGACATGACTCAGCGGTTGGCGAATATGGGCGGGCTTCTGGCCCGCCTTGCATATCGCTCGATGATG
GGCTACATGCAGTTTTCTGCCATCCGGCTGGCTCCAACTGAAAGCCTACAGTGCAACTCAACTCCGGGCTATATT
CCAGAAGGCAACCAGCCGTCCACCTCTCTCGTTCAGCGCTGGAAATCCTGGTGTTTGGGCAGTCAGACACACTCC
GGCCACCAAGACCAGCCACTCCTTCTCTGGGGTCTGACACTGGGTATTATGGCTGATTTCCTAGATATGCTTCCA
CCTCACACCGCTGTACAGTTATGGAAATATCCAAATTTCACAGCAATAGACTTGCGATTCATTATAAACGTTCTG
ACATATCGTCTGCGCAAGCACAACCGCAGTCAGGTCCGGTCAGGTGCCCGACCCAGCAACACGGCGGTGGATAGC
CAAACCGCTGCCCTGCCGGTCACGAAGACCGCAGCGACCAATGCGGATGCGGAACACAATCAAGTCGGCATTGGA
GGGCTTGGAGTAGGTAGGTATTTCGGATCATCTGATACAGACCCTACCGGCCATGCATATGCAGTGGGAATCATG
CTCCGGGGCTACTATGAACGAGTGCGGATTGCCATCTACATCATCGTGGCCTGGAGGATCGCACTGGGCTCTACA
GCCGCCATCTATGCATGGAAGCTGCTCCGCCGGCTAAAGTAG
Transcript >Ani_SJS72_1|g5168.t1
ATGTCCTCCTCGTTGGCCCCGTCGCTTCATGACGTCCTGTCAGACTTGCACCACCGTCCATATCCCCATGTCCCC
AATCCGCCCTCGTGTAAGAAACGTGCCTCCGTCGCTTTGATCCTCCGTGTCCGTCCCACATACCACCACTGGCCC
AATTCCTCGTCTCTCTCTGCTTCAGATGTTTCCGCCTCCGTTCCGCAACGACTGGAGACGTTCTTCGCACAGGAC
TGGGTCCAGAATGGAGAACCGGAAGCTCTCTTTATCAAACGAGCATCGCGCGTAGGCGATCGCTGGACTGGCCAT
GTCGCCCTGCCAGGAGGAAAACGGGACCCAGAAGATGTCGACGATAAAGCTGCCGCAATTCGAGAAGCCGTGGAA
GAGATCGGACTGGACTTGACAACGAGTGAATGTATCCATGTGGGAAATTTACCAGAGAGAGTAGTGACTTCAAGT
TGGGGAACAGTACCTTTAATGGTTCTCTGTCCTTATGTCTTCTTGTTAACGTCCAGTGATTCGCCCACCCTCCGA
TTACAGCCTACGGAAGTCGCTTCGACCCATTGGGTACCCCTCAGAGCCCTGCTCTCCTCATCCCTGAGAACGGTG
GAACATGTGGACATGACTCAGCGGTTGGCGAATATGGGCGGGCTTCTGGCCCGCCTTGCATATCGCTCGATGATG
GGCTACATGCAGTTTTCTGCCATCCGGCTGGCTCCAACTGAAAGCCTACAGTGCAACTCAACTCCGGGCTATATT
CCAGAAGGCAACCAGCCGTCCACCTCTCTCGTTCAGCGCTGGAAATCCTGGTGTTTGGGCAGTCAGACACACTCC
GGCCACCAAGACCAGCCACTCCTTCTCTGGGGTCTGACACTGGGTATTATGGCTGATTTCCTAGATATGCTTCCA
CCTCACACCGCTGTACAGTTATGGAAATATCCAAATTTCACAGCAATAGACTTGCGATTCATTATAAACGTTCTG
ACATATCGTCTGCGCAAGCACAACCGCAGTCAGGTCCGGTCAGGTGCCCGACCCAGCAACACGGCGGTGGATAGC
CAAACCGCTGCCCTGCCGGTCACGAAGACCGCAGCGACCAATGCGGATGCGGAACACAATCAAGTCGGCATTGGA
GGGCTTGGAGTAGGTAGGTATTTCGGATCATCTGATACAGACCCTACCGGCCATGCATATGCAGTGGGAATCATG
CTCCGGGGCTACTATGAACGAGTGCGGATTGCCATCTACATCATCGTGGCCTGGAGGATCGCACTGGGCTCTACA
GCCGCCATCTATGCATGGAAGCTGCTCCGCCGGCTAAAGTAG
Gene >Ani_SJS72_1|g5168.t1
ATGTCCTCCTCGTTGGCCCCGTCGCTTCATGACGTCCTGTCAGACTTGCACCACCGTCCATATCCCCATGTCCCC
AATCCGCCCTCGTGTAAGAAACGTGCCTCCGTCGCTTTGATCCTCCGTGTCCGTCCCACATACCACCACTGGCCC
AATTCCTCGTCTCTCTCTGCTTCAGATGTTTCCGCCTCCGTTCCGCAACGACTGGAGACGTTCTTCGCACAGGAC
TGGGTCCAGAATGGAGAACCGGAAGCTCTCTTTATCAAACGAGCATCGCGCGTAGGCGATCGCTGGACTGGCCAT
GTCGCCCTGCCAGGAGGAAAACGGGACCCAGAAGATGTCGACGATAAAGCTGCCGCAATTCGAGAAGCCGTGGAA
GAGATCGGACTGGACTTGACAACGAGTGAATGTATCCATGTGGGAAATTTACCAGAGAGAGTAGTGACTTCAAGT
TGGGGAACAGTACCGTGCGTGTCTTCCCACGTCTCCTTTTCGTCGCTCATAGAAAGCATACCACTGACTATATTC
CTTCTAGTTTAATGGTTCTCTGTCCTTATGTCTTCTTGTTAACGTCCAGTGATTCGCCCACCCTCCGATTACAGC
CTACGGAAGTCGCTTCGACCCATTGGGTACCCCTCAGAGCCCTGCTCTCCTCATCCCTGAGAACGGTGGAACATG
TGGACATGACTCAGCGGTTGGCGAATATGGGCGGGCTTCTGGCCCGCCTTGCATATCGCTCGATGATGGGCTACA
TGCAGTTTTCTGCCATCCGGCTGGCTCCAACTGAAAGCCTACAGTGCAACTCAACTCCGGGCTATATTCCAGAAG
GCAACCAGCCGTCCACCTCTCTCGTTCAGCGCTGGAAATCCTGGTGTTTGGGCAGTCAGACACACTCCGGCCACC
AAGACCAGCCACTCCTTCTCTGGGGTCTGACACTGGGTATTATGGCTGATTTCCTAGATATGCTTCCACCTCACA
CCGCTGTACAGTTATGGAAATATCCAAATTTCACAGCAATAGACTTGCGATTCATTATAAACGTTCTGACATATC
GTCTGCGCAAGCACAACCGCAGTCAGGTCCGGTCAGGTGCCCGACCCAGCAACACGGCGGTGGATAGCCAAACCG
CTGCCCTGCCGGTCACGAAGACCGCAGCGACCAATGCGGATGCGGAACACAATCAAGTCGGCATTGGAGGGCTTG
GAGTAGGTAGGTATTTCGGATCATCTGATACAGACCCTACCGGCCATGCATATGCAGTGGGAATCATGCTCCGGG
GCTACTATGAACGAGTGCGGATTGCCATCTACATCATCGTGGCCTGGAGGATCGCACTGGGCTCTACAGCCGCCA
TCTATGCATGGAAGCTGCTCCGCCGGCTAAAGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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