© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ani_SJS72_1|g5163.t1 |
| Gene name | |
| Location | scaffold_034:230739..231239 |
| Strand | + |
| Gene length (bp) | 500 |
| Transcript length (bp) | 408 |
| Coding sequence length (bp) | 408 |
| Protein length (aa) | 136 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 33 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 39 | 61 | 22 |
| 2 | 66 | 83 | 17 |
| 3 | 111 | 133 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g5163.t1 MFERRAADRYRLRMHRARTVALTSDEIVEVRAAQRTFEGAYIRTALSQFSFALVVLKIFTSEFYSTGALFAIYGT GVLIIGLFRRQQGNRQFFSEIGEDGIRHKFRTSGNAVVVLTALSIAAYATLIALTVRLDK* |
| Coding | >Ani_SJS72_1|g5163.t1 ATGTTCGAGCGTCGCGCCGCGGACCGTTACCGGCTGCGAATGCACCGTGCCCGCACAGTCGCGCTAACTTCGGAT GAGATTGTCGAAGTACGGGCAGCGCAGCGGACTTTCGAAGGCGCCTACATCCGTACGGCTTTATCCCAATTCTCC TTTGCCCTAGTGGTATTGAAGATCTTCACCAGCGAGTTCTATAGCACTGGTGCGCTTTTCGCCATCTACGGCACG GGCGTGCTTATCATCGGACTCTTCCGTCGCCAACAAGGCAACCGGCAATTCTTTTCCGAGATAGGGGAAGATGGC ATTCGTCACAAGTTCAGAACTAGTGGAAATGCCGTGGTGGTCTTGACGGCCCTTAGCATTGCCGCCTACGCGACC CTTATCGCGCTGACCGTGAGGCTGGACAAATAG |
| Transcript | >Ani_SJS72_1|g5163.t1 ATGTTCGAGCGTCGCGCCGCGGACCGTTACCGGCTGCGAATGCACCGTGCCCGCACAGTCGCGCTAACTTCGGAT GAGATTGTCGAAGTACGGGCAGCGCAGCGGACTTTCGAAGGCGCCTACATCCGTACGGCTTTATCCCAATTCTCC TTTGCCCTAGTGGTATTGAAGATCTTCACCAGCGAGTTCTATAGCACTGGTGCGCTTTTCGCCATCTACGGCACG GGCGTGCTTATCATCGGACTCTTCCGTCGCCAACAAGGCAACCGGCAATTCTTTTCCGAGATAGGGGAAGATGGC ATTCGTCACAAGTTCAGAACTAGTGGAAATGCCGTGGTGGTCTTGACGGCCCTTAGCATTGCCGCCTACGCGACC CTTATCGCGCTGACCGTGAGGCTGGACAAATAG |
| Gene | >Ani_SJS72_1|g5163.t1 ATGTTCGAGGTGCGTTGGCTGACTGGAACATACCACACGGCTTATTCTCCCTACAATGAGATTTGCATCTATAAT GGTGTCTCCGTACTGACTGGCACCAGCGTCGCGCCGCGGACCGTTACCGGCTGCGAATGCACCGTGCCCGCACAG TCGCGCTAACTTCGGATGAGATTGTCGAAGTACGGGCAGCGCAGCGGACTTTCGAAGGCGCCTACATCCGTACGG CTTTATCCCAATTCTCCTTTGCCCTAGTGGTATTGAAGATCTTCACCAGCGAGTTCTATAGCACTGGTGCGCTTT TCGCCATCTACGGCACGGGCGTGCTTATCATCGGACTCTTCCGTCGCCAACAAGGCAACCGGCAATTCTTTTCCG AGATAGGGGAAGATGGCATTCGTCACAAGTTCAGAACTAGTGGAAATGCCGTGGTGGTCTTGACGGCCCTTAGCA TTGCCGCCTACGCGACCCTTATCGCGCTGACCGTGAGGCTGGACAAATAG |