Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS72_1|g5163.t1
Gene name
Locationscaffold_034:230739..231239
Strand+
Gene length (bp)500
Transcript length (bp)408
Coding sequence length (bp)408
Protein length (aa) 136

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 33 0.5

Transmembrane Domains

Domain # Start End Length
1 39 61 22
2 66 83 17
3 111 133 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS72_1|g5163.t1
MFERRAADRYRLRMHRARTVALTSDEIVEVRAAQRTFEGAYIRTALSQFSFALVVLKIFTSEFYSTGALFAIYGT
GVLIIGLFRRQQGNRQFFSEIGEDGIRHKFRTSGNAVVVLTALSIAAYATLIALTVRLDK*
Coding >Ani_SJS72_1|g5163.t1
ATGTTCGAGCGTCGCGCCGCGGACCGTTACCGGCTGCGAATGCACCGTGCCCGCACAGTCGCGCTAACTTCGGAT
GAGATTGTCGAAGTACGGGCAGCGCAGCGGACTTTCGAAGGCGCCTACATCCGTACGGCTTTATCCCAATTCTCC
TTTGCCCTAGTGGTATTGAAGATCTTCACCAGCGAGTTCTATAGCACTGGTGCGCTTTTCGCCATCTACGGCACG
GGCGTGCTTATCATCGGACTCTTCCGTCGCCAACAAGGCAACCGGCAATTCTTTTCCGAGATAGGGGAAGATGGC
ATTCGTCACAAGTTCAGAACTAGTGGAAATGCCGTGGTGGTCTTGACGGCCCTTAGCATTGCCGCCTACGCGACC
CTTATCGCGCTGACCGTGAGGCTGGACAAATAG
Transcript >Ani_SJS72_1|g5163.t1
ATGTTCGAGCGTCGCGCCGCGGACCGTTACCGGCTGCGAATGCACCGTGCCCGCACAGTCGCGCTAACTTCGGAT
GAGATTGTCGAAGTACGGGCAGCGCAGCGGACTTTCGAAGGCGCCTACATCCGTACGGCTTTATCCCAATTCTCC
TTTGCCCTAGTGGTATTGAAGATCTTCACCAGCGAGTTCTATAGCACTGGTGCGCTTTTCGCCATCTACGGCACG
GGCGTGCTTATCATCGGACTCTTCCGTCGCCAACAAGGCAACCGGCAATTCTTTTCCGAGATAGGGGAAGATGGC
ATTCGTCACAAGTTCAGAACTAGTGGAAATGCCGTGGTGGTCTTGACGGCCCTTAGCATTGCCGCCTACGCGACC
CTTATCGCGCTGACCGTGAGGCTGGACAAATAG
Gene >Ani_SJS72_1|g5163.t1
ATGTTCGAGGTGCGTTGGCTGACTGGAACATACCACACGGCTTATTCTCCCTACAATGAGATTTGCATCTATAAT
GGTGTCTCCGTACTGACTGGCACCAGCGTCGCGCCGCGGACCGTTACCGGCTGCGAATGCACCGTGCCCGCACAG
TCGCGCTAACTTCGGATGAGATTGTCGAAGTACGGGCAGCGCAGCGGACTTTCGAAGGCGCCTACATCCGTACGG
CTTTATCCCAATTCTCCTTTGCCCTAGTGGTATTGAAGATCTTCACCAGCGAGTTCTATAGCACTGGTGCGCTTT
TCGCCATCTACGGCACGGGCGTGCTTATCATCGGACTCTTCCGTCGCCAACAAGGCAACCGGCAATTCTTTTCCG
AGATAGGGGAAGATGGCATTCGTCACAAGTTCAGAACTAGTGGAAATGCCGTGGTGGTCTTGACGGCCCTTAGCA
TTGCCGCCTACGCGACCCTTATCGCGCTGACCGTGAGGCTGGACAAATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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