© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ani_SJS72_1|g5156.t1 |
| Gene name | |
| Location | scaffold_034:211882..213828 |
| Strand | - |
| Gene length (bp) | 1946 |
| Transcript length (bp) | 1674 |
| Coding sequence length (bp) | 1674 |
| Protein length (aa) | 558 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00999 | Na_H_Exchanger | Sodium/hydrogen exchanger family | 1.8E-47 | 16 | 436 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0015299 | solute:proton antiporter activity | Yes |
| GO:0006812 | cation transport | Yes |
| GO:0006811 | ion transport | No |
| GO:0009987 | cellular process | No |
| GO:0051234 | establishment of localization | No |
| GO:0008150 | biological_process | No |
| GO:0022804 | active transmembrane transporter activity | No |
| GO:0015297 | antiporter activity | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0003674 | molecular_function | No |
| GO:0005215 | transporter activity | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0051179 | localization | No |
| GO:0006810 | transport | No |
| GO:0022857 | transmembrane transporter activity | No |
| GO:0015298 | solute:cation antiporter activity | No |
| GO:0015291 | secondary active transmembrane transporter activity | No |
| GO:0005575 | cellular_component | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 11 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 7 | 29 | 22 |
| 2 | 34 | 56 | 22 |
| 3 | 105 | 127 | 22 |
| 4 | 212 | 234 | 22 |
| 5 | 255 | 277 | 22 |
| 6 | 308 | 330 | 22 |
| 7 | 337 | 359 | 22 |
| 8 | 369 | 391 | 22 |
| 9 | 416 | 438 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g5156.t1 MPTLSLINFNIVCATLGGFISVFGLVSYLFKERFYLSEALISLLAGVIFSPHAANFIRPQEYALGSEQNLEEITL YFTRLVLGVQLVLAGVQLPKRYLQIEWKSLSLLLGPGMAAMWMCSSLVIWAMVPNFPFLHALVVGACITPTDPVL SNSIVKGKFADKNVPRPLQRIIVAESGANDGLGYPFLYFGLYLLKYIGKGGEGYSGGAGKAIGLWFYETWVYTVI LSVVYGIVVGWLSRKLLHWAEEKHYVDRESFLVFAIALSLFIIGTCGLIGTDDLLACFVAGNVFTQDDWFRLETM DDSLQPTIDMLLNLAVFMWFGAVCPWSSFLNNSVIPIYRLIFLGILILLVRRMPIIFAMHKLIHQIEHFYQAAFV GFFGPIGVGAVFYLSVSREFLNQITVEGQVREDAAKVSEAVNVVVWFLVICSIIVHGLCIPLAKAGYHLPRTISQ ALSTSTIAEPDPVPIANVQHTHSTATRSAGPTNNRNRKRGHAGREPPDPAVFQIGRSVIRTTSSQEQVQVGAATA DEPARPVNLVVRENEQDSAQENSPTPPFEQHV* |
| Coding | >Ani_SJS72_1|g5156.t1 ATGCCTACCCTATCGTTGATCAACTTCAACATCGTCTGTGCGACGCTGGGAGGATTTATATCCGTCTTCGGATTG GTGTCCTACCTGTTCAAGGAGAGATTCTATCTTTCTGAAGCATTGATTTCATTGCTAGCTGGAGTGATCTTCTCC CCCCATGCAGCCAACTTTATAAGACCCCAGGAGTATGCACTTGGTTCCGAGCAGAATCTAGAAGAGATCACCCTG TACTTCACCCGTCTCGTCCTTGGGGTCCAGCTGGTCCTTGCCGGGGTGCAGCTCCCCAAACGGTACTTGCAGATA GAATGGAAGAGCCTGTCGCTCCTTTTGGGACCTGGGATGGCTGCCATGTGGATGTGTAGCAGTCTGGTCATTTGG GCCATGGTGCCGAACTTTCCCTTTCTCCATGCTCTCGTCGTGGGTGCGTGCATCACTCCCACCGACCCCGTGCTT TCCAATTCCATCGTAAAGGGCAAATTTGCAGACAAGAATGTGCCTCGTCCTTTGCAGCGCATTATCGTGGCCGAG TCAGGTGCCAACGATGGTCTTGGCTATCCTTTCCTCTATTTTGGATTGTATCTTCTCAAGTACATTGGCAAGGGC GGCGAGGGGTACAGTGGAGGCGCTGGGAAAGCCATAGGCTTGTGGTTCTATGAGACTTGGGTCTATACTGTGATC CTGAGTGTCGTGTATGGGATCGTAGTCGGGTGGCTCTCCCGTAAGTTGCTTCACTGGGCAGAGGAGAAGCATTAC GTGGATCGGGAAAGCTTTCTTGTATTTGCTATCGCTCTTTCACTGTTTATTATTGGTACATGTGGCTTGATAGGG ACAGATGATCTCCTGGCCTGCTTTGTTGCCGGCAATGTGTTTACGCAGGATGACTGGTTTCGCCTAGAAACAATG GATGATTCTTTGCAGCCAACCATCGATATGTTGCTAAACTTGGCGGTCTTCATGTGGTTCGGTGCTGTCTGCCCG TGGTCGTCGTTCCTGAACAACAGCGTGATCCCCATCTATCGCTTGATATTCTTAGGAATCCTAATCCTGCTAGTC CGACGCATGCCTATTATTTTTGCCATGCACAAGCTCATCCACCAAATTGAGCACTTCTATCAGGCAGCATTTGTT GGATTCTTTGGACCTATCGGAGTCGGGGCTGTCTTCTACCTGTCGGTCAGTCGGGAATTCCTGAACCAGATCACC GTCGAAGGTCAAGTCCGTGAAGATGCCGCGAAGGTTTCCGAGGCTGTCAATGTCGTGGTTTGGTTCCTGGTCATT TGCAGCATAATCGTCCATGGACTCTGCATCCCACTAGCAAAAGCCGGCTACCATCTCCCACGGACAATCTCCCAA GCACTCAGCACCAGCACCATTGCTGAACCCGACCCCGTGCCGATCGCCAATGTGCAGCACACGCACAGCACTGCG ACACGCAGCGCAGGGCCCACGAACAACCGAAACCGGAAGCGCGGTCATGCAGGACGGGAACCGCCCGACCCAGCT GTCTTCCAGATCGGTCGGTCTGTTATTCGGACCACCTCTTCGCAGGAGCAAGTCCAGGTTGGAGCAGCAACAGCG GATGAACCTGCTCGACCCGTCAACCTGGTTGTGCGAGAGAACGAGCAGGATAGTGCACAGGAGAACAGTCCGACC CCTCCATTCGAACAACATGTCTAG |
| Transcript | >Ani_SJS72_1|g5156.t1 ATGCCTACCCTATCGTTGATCAACTTCAACATCGTCTGTGCGACGCTGGGAGGATTTATATCCGTCTTCGGATTG GTGTCCTACCTGTTCAAGGAGAGATTCTATCTTTCTGAAGCATTGATTTCATTGCTAGCTGGAGTGATCTTCTCC CCCCATGCAGCCAACTTTATAAGACCCCAGGAGTATGCACTTGGTTCCGAGCAGAATCTAGAAGAGATCACCCTG TACTTCACCCGTCTCGTCCTTGGGGTCCAGCTGGTCCTTGCCGGGGTGCAGCTCCCCAAACGGTACTTGCAGATA GAATGGAAGAGCCTGTCGCTCCTTTTGGGACCTGGGATGGCTGCCATGTGGATGTGTAGCAGTCTGGTCATTTGG GCCATGGTGCCGAACTTTCCCTTTCTCCATGCTCTCGTCGTGGGTGCGTGCATCACTCCCACCGACCCCGTGCTT TCCAATTCCATCGTAAAGGGCAAATTTGCAGACAAGAATGTGCCTCGTCCTTTGCAGCGCATTATCGTGGCCGAG TCAGGTGCCAACGATGGTCTTGGCTATCCTTTCCTCTATTTTGGATTGTATCTTCTCAAGTACATTGGCAAGGGC GGCGAGGGGTACAGTGGAGGCGCTGGGAAAGCCATAGGCTTGTGGTTCTATGAGACTTGGGTCTATACTGTGATC CTGAGTGTCGTGTATGGGATCGTAGTCGGGTGGCTCTCCCGTAAGTTGCTTCACTGGGCAGAGGAGAAGCATTAC GTGGATCGGGAAAGCTTTCTTGTATTTGCTATCGCTCTTTCACTGTTTATTATTGGTACATGTGGCTTGATAGGG ACAGATGATCTCCTGGCCTGCTTTGTTGCCGGCAATGTGTTTACGCAGGATGACTGGTTTCGCCTAGAAACAATG GATGATTCTTTGCAGCCAACCATCGATATGTTGCTAAACTTGGCGGTCTTCATGTGGTTCGGTGCTGTCTGCCCG TGGTCGTCGTTCCTGAACAACAGCGTGATCCCCATCTATCGCTTGATATTCTTAGGAATCCTAATCCTGCTAGTC CGACGCATGCCTATTATTTTTGCCATGCACAAGCTCATCCACCAAATTGAGCACTTCTATCAGGCAGCATTTGTT GGATTCTTTGGACCTATCGGAGTCGGGGCTGTCTTCTACCTGTCGGTCAGTCGGGAATTCCTGAACCAGATCACC GTCGAAGGTCAAGTCCGTGAAGATGCCGCGAAGGTTTCCGAGGCTGTCAATGTCGTGGTTTGGTTCCTGGTCATT TGCAGCATAATCGTCCATGGACTCTGCATCCCACTAGCAAAAGCCGGCTACCATCTCCCACGGACAATCTCCCAA GCACTCAGCACCAGCACCATTGCTGAACCCGACCCCGTGCCGATCGCCAATGTGCAGCACACGCACAGCACTGCG ACACGCAGCGCAGGGCCCACGAACAACCGAAACCGGAAGCGCGGTCATGCAGGACGGGAACCGCCCGACCCAGCT GTCTTCCAGATCGGTCGGTCTGTTATTCGGACCACCTCTTCGCAGGAGCAAGTCCAGGTTGGAGCAGCAACAGCG GATGAACCTGCTCGACCCGTCAACCTGGTTGTGCGAGAGAACGAGCAGGATAGTGCACAGGAGAACAGTCCGACC CCTCCATTCGAACAACATGTCTAG |
| Gene | >Ani_SJS72_1|g5156.t1 ATGCCTACCCTATCGTTGATCAACTTCAACATCGTCTGTGCGACGCTGGGAGGATTTATATCCGTCTTCGGATTG GTGTCCTACCTGTTCAAGGAGAGATTCTATCTTTCTGAAGCATGTCCGTCCTGCCTTTTTCAACCTTCCACCCGC TACTCCCGAACTCTCCTCGGCAATGCGTGTTGTCGTTGATTGGACGGTGGATGACTGACGTTGTACAGTGATTTC ATTGCTAGCTGGAGTGATCTTCTCCCCCCATGCAGCCAACTTTATAAGACCCCAGGAGTATGCACTTGGTTCCGA GCAGAATCTAGAAGAGATCACCCTGTACTTCACCCGTCTCGTCCTTGGGGTCCAGCTGGTCCTTGCCGGGGTGCA GCTCCCCAAACGGTACTTGCAGATAGAATGGAAGAGCCTGTCGCTCCTTTTGGGACCTGGGATGGCTGCCATGTG GATGTGTAGCAGTCTGGTCATTTGGGCCATGGTGCCGAACTTTCCCTTTCTCCATGCTCTCGTCGTGGGTGCGTG CATCACTCCCACCGACCCCGTGCTTTCCAATTCCATCGTAAAGGGCAAATTTGCAGACAAGAATGTGCCTCGTCC TTTGCAGCGCATTATCGTGGCCGAGTCAGGTGCCAACGATGGTCTTGGCTATCCTTTCCTCTATTTTGGATTGTA TCTTCTCAAGTACATTGGCAAGGGCGGCGAGGGGTACAGTGGAGGCGCTGGGAAAGCCATAGGCTTGTGGTTCTA TGAGACTTGGGTCTATACTGTGATCCTGAGTGTCGTGTATGGGATCGTAGTCGGGTGGCTCTCCCGTAAGTTGCT TCACTGGGCAGAGGAGAAGCATTACGTGGATCGGGAAAGCTTTCTTGTATTTGCTATCGCTCTTTCAGTAAGTTG AATCTTGGTTAGGTCATCACACGTTACTAACACCGAATGCAGCTGTTTATTATTGGTACATGTGGCTTGATAGGG ACAGATGATCTCCTGGCCTGCTTTGTTGCCGGCAATGTGTTTACGCAGGAGTAAGACGTCATGTCCACTTGCTTT GGTTCAATTGCTGACGAAGGTAGTGACTGGTTTCGCCTAGAAACAATGGATGATTCTTTGCAGCCAACCATCGAT ATGTTGCTAAACTTGGCGGTCTTCATGTGGTTCGGTGCTGTCTGCCCGTGGTCGTCGTTCCTGAACAACAGCGTG ATCCCCATCTATCGCTTGATATTCTTAGGAATCCTAATCCTGCTAGTCCGACGCATGCCTATTATTTTTGCCATG CACAAGCTCATCCACCAAATTGAGCACTTCTATCAGGCAGCATTTGTTGGATTCTTTGGACCTATCGGAGTCGGG GCTGTCTTCTACCTGTCGGTCAGTCGGGAATTCCTGAACCAGATCACCGTCGAAGGTCAAGTCCGTGAAGATGCC GCGAAGGTTTCCGAGGCTGTCAATGTCGTGGTTTGGTTCCTGGTCATTTGCAGCATAGTAAGTCCACACACTATC CGGCCAATATCTAGATCTTATAGATCTTGAAACATTTCTTCTGACTTTCTCGGCAGATCGTCCATGGACTCTGCA TCCCACTAGCAAAAGCCGGCTACCATCTCCCACGGACAATCTCCCAAGCACTCAGCACCAGCACCATTGCTGAAC CCGACCCCGTGCCGATCGCCAATGTGCAGCACACGCACAGCACTGCGACACGCAGCGCAGGGCCCACGAACAACC GAAACCGGAAGCGCGGTCATGCAGGACGGGAACCGCCCGACCCAGCTGTCTTCCAGATCGGTCGGTCTGTTATTC GGACCACCTCTTCGCAGGAGCAAGTCCAGGTTGGAGCAGCAACAGCGGATGAACCTGCTCGACCCGTCAACCTGG TTGTGCGAGAGAACGAGCAGGATAGTGCACAGGAGAACAGTCCGACCCCTCCATTCGAACAACATGTCTAG |