Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ani_SJS72_1\|g5150.t1
Gene name
Location	scaffold_034:193563..194130
Strand	+
Gene length (bp)	567
Transcript length (bp)	489
Coding sequence length (bp)	489
Protein length (aa)	163

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF06726	BC10	Bladder cancer-related protein BC10	1.9E-16	1	55

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 18	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	10	32	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ani_SJS72_1\|g5150.t1 MFCLRSWLPLLFIPTNASPLFIISFVTLTYILHRPCIYCSALLLILFISSCHWSDKCFFDLRGDWFSPRYSTTAL DTTTSTSSSVNETLASYVFETVNSTTKALAGAVVEEAQRRLALNGTLAASTTTSAQDEWTGIGLEWLRSLLGRRE WTLPCVDVKVRL*
Coding	>Ani_SJS72_1\|g5150.t1 ATGTTCTGTCTTCGGAGCTGGCTCCCCCTCCTCTTCATCCCAACAAACGCCTCTCCCCTCTTCATCATCTCCTTC GTCACCCTAACCTACATCCTCCACCGACCCTGCATCTACTGCTCCGCGCTCCTCCTCATCCTCTTCATCTCCTCC TGCCACTGGTCCGACAAATGTTTCTTCGATCTCCGCGGTGACTGGTTCTCTCCGCGCTACTCCACCACCGCATTA GACACCACCACAAGTACATCATCATCCGTCAACGAAACCCTCGCCAGCTACGTCTTCGAAACCGTCAACAGCACC ACCAAGGCCCTTGCCGGGGCCGTCGTCGAAGAAGCGCAACGCAGACTCGCCCTGAATGGAACATTAGCCGCGTCG ACAACGACTTCCGCGCAAGATGAGTGGACGGGTATTGGGCTTGAGTGGTTGAGGAGTCTTTTGGGGAGGAGGGAG TGGACGTTGCCGTGTGTGGATGTTAAGGTGAGATTGTAA
Transcript	>Ani_SJS72_1\|g5150.t1 ATGTTCTGTCTTCGGAGCTGGCTCCCCCTCCTCTTCATCCCAACAAACGCCTCTCCCCTCTTCATCATCTCCTTC GTCACCCTAACCTACATCCTCCACCGACCCTGCATCTACTGCTCCGCGCTCCTCCTCATCCTCTTCATCTCCTCC TGCCACTGGTCCGACAAATGTTTCTTCGATCTCCGCGGTGACTGGTTCTCTCCGCGCTACTCCACCACCGCATTA GACACCACCACAAGTACATCATCATCCGTCAACGAAACCCTCGCCAGCTACGTCTTCGAAACCGTCAACAGCACC ACCAAGGCCCTTGCCGGGGCCGTCGTCGAAGAAGCGCAACGCAGACTCGCCCTGAATGGAACATTAGCCGCGTCG ACAACGACTTCCGCGCAAGATGAGTGGACGGGTATTGGGCTTGAGTGGTTGAGGAGTCTTTTGGGGAGGAGGGAG TGGACGTTGCCGTGTGTGGATGTTAAGGTGAGATTGTAA
Gene	>Ani_SJS72_1\|g5150.t1 ATGTTCTGTCTTCGGAGGTAAGCAAATCCATCCTCACCTCCAAACCACTACTTCAAACCCCCCCAGAGTACTAAT TAACGAATGAATGAATCTAGCTGGCTCCCCCTCCTCTTCATCCCAACAAACGCCTCTCCCCTCTTCATCATCTCC TTCGTCACCCTAACCTACATCCTCCACCGACCCTGCATCTACTGCTCCGCGCTCCTCCTCATCCTCTTCATCTCC TCCTGCCACTGGTCCGACAAATGTTTCTTCGATCTCCGCGGTGACTGGTTCTCTCCGCGCTACTCCACCACCGCA TTAGACACCACCACAAGTACATCATCATCCGTCAACGAAACCCTCGCCAGCTACGTCTTCGAAACCGTCAACAGC ACCACCAAGGCCCTTGCCGGGGCCGTCGTCGAAGAAGCGCAACGCAGACTCGCCCTGAATGGAACATTAGCCGCG TCGACAACGACTTCCGCGCAAGATGAGTGGACGGGTATTGGGCTTGAGTGGTTGAGGAGTCTTTTGGGGAGGAGG GAGTGGACGTTGCCGTGTGTGGATGTTAAGGTGAGATTGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail