© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ani_SJS72_1|g5081.t1 |
| Gene name | |
| Location | scaffold_033:275240..275990 |
| Strand | + |
| Gene length (bp) | 750 |
| Transcript length (bp) | 750 |
| Coding sequence length (bp) | 750 |
| Protein length (aa) | 250 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13489 | Methyltransf_23 | Methyltransferase domain | 3.2E-07 | 63 | 183 |
| PF13847 | Methyltransf_31 | Methyltransferase domain | 1.0E-06 | 68 | 178 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 15 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 40 | 62 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g5081.t1 MSSVTLTTTTTTTSTPPKPTPKDEPQEQIYTPWRLFIYDIWVLGIVSTLAWGCRISTYLIPLFRSNVGKKHLDIG AGTGYYLNQARISSTTQLTIVDNETHALNVALARCKHPVTQTHGIVTDILQPSPFPETYLTNNDQKFDSVSMYYL LHCLPVPVASKCKIFTHLKKYMTEDGVVHGANVLGKGVRKDNWFARIIRRGCLNHGVFHNEEDNAYEFERALREN FWEVETWVVGSVFVFRAKRPILDA* |
| Coding | >Ani_SJS72_1|g5081.t1 ATGTCCTCAGTCACCTTAACCACAACCACAACCACCACCTCCACCCCACCCAAACCCACCCCCAAAGACGAACCC CAAGAACAAATCTACACCCCCTGGCGCCTCTTCATCTACGACATCTGGGTCCTCGGCATCGTGAGCACCCTCGCC TGGGGCTGCCGGATCAGCACCTACCTAATCCCCTTATTCCGCTCCAACGTGGGCAAAAAGCACCTCGACATCGGC GCCGGCACCGGCTACTACCTCAACCAAGCCCGGATCTCCTCAACAACCCAGCTCACAATCGTCGACAACGAGACC CACGCGCTCAACGTCGCCCTCGCTCGCTGCAAGCACCCAGTCACCCAAACGCACGGCATCGTCACCGACATCCTG CAACCCTCGCCCTTCCCAGAAACCTACCTCACCAACAATGACCAAAAATTCGACTCCGTATCAATGTACTACCTC CTGCACTGCCTGCCCGTGCCCGTGGCCAGCAAATGCAAGATCTTCACGCATCTCAAGAAATACATGACAGAGGAT GGGGTGGTTCATGGAGCGAATGTGCTGGGCAAGGGGGTGAGGAAGGATAATTGGTTTGCGAGGATTATCCGAAGA GGGTGTTTGAATCATGGGGTGTTCCATAATGAGGAGGATAATGCGTATGAGTTTGAGAGGGCCCTCAGGGAGAAC TTTTGGGAGGTGGAGACGTGGGTGGTCGGGAGTGTTTTTGTTTTTAGGGCCAAGAGGCCGATTCTTGATGCTTAG |
| Transcript | >Ani_SJS72_1|g5081.t1 ATGTCCTCAGTCACCTTAACCACAACCACAACCACCACCTCCACCCCACCCAAACCCACCCCCAAAGACGAACCC CAAGAACAAATCTACACCCCCTGGCGCCTCTTCATCTACGACATCTGGGTCCTCGGCATCGTGAGCACCCTCGCC TGGGGCTGCCGGATCAGCACCTACCTAATCCCCTTATTCCGCTCCAACGTGGGCAAAAAGCACCTCGACATCGGC GCCGGCACCGGCTACTACCTCAACCAAGCCCGGATCTCCTCAACAACCCAGCTCACAATCGTCGACAACGAGACC CACGCGCTCAACGTCGCCCTCGCTCGCTGCAAGCACCCAGTCACCCAAACGCACGGCATCGTCACCGACATCCTG CAACCCTCGCCCTTCCCAGAAACCTACCTCACCAACAATGACCAAAAATTCGACTCCGTATCAATGTACTACCTC CTGCACTGCCTGCCCGTGCCCGTGGCCAGCAAATGCAAGATCTTCACGCATCTCAAGAAATACATGACAGAGGAT GGGGTGGTTCATGGAGCGAATGTGCTGGGCAAGGGGGTGAGGAAGGATAATTGGTTTGCGAGGATTATCCGAAGA GGGTGTTTGAATCATGGGGTGTTCCATAATGAGGAGGATAATGCGTATGAGTTTGAGAGGGCCCTCAGGGAGAAC TTTTGGGAGGTGGAGACGTGGGTGGTCGGGAGTGTTTTTGTTTTTAGGGCCAAGAGGCCGATTCTTGATGCTTAG |
| Gene | >Ani_SJS72_1|g5081.t1 ATGTCCTCAGTCACCTTAACCACAACCACAACCACCACCTCCACCCCACCCAAACCCACCCCCAAAGACGAACCC CAAGAACAAATCTACACCCCCTGGCGCCTCTTCATCTACGACATCTGGGTCCTCGGCATCGTGAGCACCCTCGCC TGGGGCTGCCGGATCAGCACCTACCTAATCCCCTTATTCCGCTCCAACGTGGGCAAAAAGCACCTCGACATCGGC GCCGGCACCGGCTACTACCTCAACCAAGCCCGGATCTCCTCAACAACCCAGCTCACAATCGTCGACAACGAGACC CACGCGCTCAACGTCGCCCTCGCTCGCTGCAAGCACCCAGTCACCCAAACGCACGGCATCGTCACCGACATCCTG CAACCCTCGCCCTTCCCAGAAACCTACCTCACCAACAATGACCAAAAATTCGACTCCGTATCAATGTACTACCTC CTGCACTGCCTGCCCGTGCCCGTGGCCAGCAAATGCAAGATCTTCACGCATCTCAAGAAATACATGACAGAGGAT GGGGTGGTTCATGGAGCGAATGTGCTGGGCAAGGGGGTGAGGAAGGATAATTGGTTTGCGAGGATTATCCGAAGA GGGTGTTTGAATCATGGGGTGTTCCATAATGAGGAGGATAATGCGTATGAGTTTGAGAGGGCCCTCAGGGAGAAC TTTTGGGAGGTGGAGACGTGGGTGGTCGGGAGTGTTTTTGTTTTTAGGGCCAAGAGGCCGATTCTTGATGCTTAG |