© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g4994.t1 |
| Gene name | |
| Location | scaffold_033:28698..30594 |
| Strand | - |
| Gene length (bp) | 1896 |
| Transcript length (bp) | 1665 |
| Coding sequence length (bp) | 1665 |
| Protein length (aa) | 555 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00324 | AA_permease | Amino acid permease | 6.4E-130 | 50 | 513 |
| PF13520 | AA_permease_2 | Amino acid permease | 4.0E-29 | 47 | 497 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016020 | membrane | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0009987 | cellular process | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005215 | transporter activity | No |
| GO:0005575 | cellular_component | No |
| GO:0003674 | molecular_function | No |
| GO:0006810 | transport | No |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 38 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 52 | 74 | 22 |
| 2 | 89 | 111 | 22 |
| 3 | 132 | 154 | 22 |
| 4 | 159 | 181 | 22 |
| 5 | 188 | 210 | 22 |
| 6 | 240 | 262 | 22 |
| 7 | 282 | 304 | 22 |
| 8 | 324 | 346 | 22 |
| 9 | 384 | 401 | 17 |
| 10 | 411 | 433 | 22 |
| 11 | 458 | 480 | 22 |
| 12 | 484 | 506 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g4994.t1 MGAPTLKDLEESKTEVTSPVYVDEDPEALKGEIHHGPNTDTQRGLSSRQLQLLALGGCIGTGLFVGSGSTLSTVG PAPLFMGYCAMSSVVWFVMNVLGEMTTYLPIKGISVPYMIGRYTEPSIGFAAGYNYWYSFAMLLASEVTAAGIII QYWTTSINVGVWITIILLVILLLNIIAVSWYGEAEFWFATLKILAIIGLIILGVVLFFGGGPNHDRLGFRYWDNP GAFNPYLVGGNTGRFLDFWTAFIKSGFSFIFSPELITTAAGEVEAPRRNIPKATNRFIYRVFAFYILGTLVIGVT VAYNDPKLMSAVASGSSSASASPFVIAIQNAGISGLNHVVNAAILISAWSSGNAWLFAGSRTLYSLACGGQAPKI FTRCNRNGVPYVAVLITWVVGLLSFLNLSDSGETVFYWFTNITTVGGFINWVLIGITYLRFRKALTYHGLLDTLT FKTPLQPYGTYYVIVVVSLLTITNGYAVFFPGNFTAADFLVSYIVVAIFLALYVGHKLWYRTPWMTKVSEIDVFT GKEEIDQLCANDFERKPRNWLERVWWWIA* |
| Coding | >Ani_SJS72_1|g4994.t1 ATGGGTGCGCCGACGTTAAAGGACCTCGAAGAGTCCAAGACCGAGGTGACATCTCCAGTATATGTTGATGAAGAC CCCGAGGCCCTCAAGGGCGAGATCCACCATGGGCCAAACACAGACACTCAGCGTGGATTGTCTTCCCGACAGCTG CAGCTGCTTGCTCTTGGAGGTTGTATTGGGACCGGTCTATTCGTAGGTTCGGGATCCACGCTGTCGACGGTGGGC CCAGCACCACTGTTCATGGGCTACTGTGCCATGTCGTCGGTGGTGTGGTTTGTGATGAACGTGCTGGGCGAGATG ACCACCTATTTGCCCATCAAGGGCATTTCGGTGCCTTATATGATAGGCCGCTATACGGAGCCGAGTATTGGATTC GCTGCTGGATATAATTATTGGTACTCTTTTGCCATGTTACTGGCAAGTGAAGTGACGGCTGCCGGGATCATCATC CAGTACTGGACCACCTCCATCAATGTCGGGGTGTGGATCACAATCATCCTCCTCGTGATTCTGCTACTCAACATT ATTGCGGTGTCATGGTACGGAGAAGCCGAGTTCTGGTTTGCAACGTTAAAGATCCTAGCCATCATTGGCCTGATT ATCCTGGGTGTGGTGCTCTTCTTCGGCGGTGGTCCCAACCATGATCGGCTAGGCTTCCGCTATTGGGATAACCCG GGCGCGTTCAATCCCTACTTGGTCGGTGGAAACACCGGTCGCTTCCTGGACTTCTGGACAGCTTTCATCAAGTCT GGCTTCTCCTTCATTTTCTCCCCCGAACTTATCACCACTGCCGCTGGTGAAGTTGAAGCACCCCGTCGCAATATC CCGAAAGCCACCAACCGGTTCATCTACCGAGTCTTTGCCTTCTACATTCTGGGCACCCTCGTGATCGGTGTCACA GTCGCTTATAATGATCCTAAACTCATGTCCGCGGTTGCCAGCGGTAGCTCTAGCGCCAGTGCCAGTCCTTTTGTT ATTGCCATCCAGAATGCGGGTATCTCTGGGCTGAACCACGTCGTCAACGCTGCTATCCTGATCTCAGCCTGGTCC TCGGGTAATGCATGGTTGTTCGCTGGTTCTCGAACCCTGTACTCGCTCGCCTGCGGCGGCCAGGCCCCCAAGATC TTCACCCGGTGCAACCGCAACGGCGTGCCTTACGTAGCCGTGCTGATCACCTGGGTGGTCGGCTTGCTGTCCTTC CTGAACCTGTCTGACTCAGGAGAGACTGTCTTCTACTGGTTCACGAACATCACCACAGTGGGAGGGTTTATTAAC TGGGTGCTCATTGGTATCACCTATCTGCGATTCCGCAAAGCCTTGACCTACCATGGACTGCTGGACACGCTCACT TTCAAGACCCCTCTGCAGCCCTACGGCACATACTACGTTATTGTCGTCGTGTCCCTCCTGACCATCACGAACGGA TATGCAGTTTTCTTCCCTGGCAACTTCACCGCCGCCGATTTCCTGGTGTCGTATATTGTGGTGGCCATCTTCCTG GCCCTCTATGTGGGCCACAAATTGTGGTACCGGACTCCATGGATGACAAAGGTGTCGGAGATTGACGTGTTCACG GGCAAAGAGGAGATTGACCAGCTCTGCGCGAACGACTTTGAACGGAAGCCACGCAATTGGCTGGAGAGGGTGTGG TGGTGGATTGCTTGA |
| Transcript | >Ani_SJS72_1|g4994.t1 ATGGGTGCGCCGACGTTAAAGGACCTCGAAGAGTCCAAGACCGAGGTGACATCTCCAGTATATGTTGATGAAGAC CCCGAGGCCCTCAAGGGCGAGATCCACCATGGGCCAAACACAGACACTCAGCGTGGATTGTCTTCCCGACAGCTG CAGCTGCTTGCTCTTGGAGGTTGTATTGGGACCGGTCTATTCGTAGGTTCGGGATCCACGCTGTCGACGGTGGGC CCAGCACCACTGTTCATGGGCTACTGTGCCATGTCGTCGGTGGTGTGGTTTGTGATGAACGTGCTGGGCGAGATG ACCACCTATTTGCCCATCAAGGGCATTTCGGTGCCTTATATGATAGGCCGCTATACGGAGCCGAGTATTGGATTC GCTGCTGGATATAATTATTGGTACTCTTTTGCCATGTTACTGGCAAGTGAAGTGACGGCTGCCGGGATCATCATC CAGTACTGGACCACCTCCATCAATGTCGGGGTGTGGATCACAATCATCCTCCTCGTGATTCTGCTACTCAACATT ATTGCGGTGTCATGGTACGGAGAAGCCGAGTTCTGGTTTGCAACGTTAAAGATCCTAGCCATCATTGGCCTGATT ATCCTGGGTGTGGTGCTCTTCTTCGGCGGTGGTCCCAACCATGATCGGCTAGGCTTCCGCTATTGGGATAACCCG GGCGCGTTCAATCCCTACTTGGTCGGTGGAAACACCGGTCGCTTCCTGGACTTCTGGACAGCTTTCATCAAGTCT GGCTTCTCCTTCATTTTCTCCCCCGAACTTATCACCACTGCCGCTGGTGAAGTTGAAGCACCCCGTCGCAATATC CCGAAAGCCACCAACCGGTTCATCTACCGAGTCTTTGCCTTCTACATTCTGGGCACCCTCGTGATCGGTGTCACA GTCGCTTATAATGATCCTAAACTCATGTCCGCGGTTGCCAGCGGTAGCTCTAGCGCCAGTGCCAGTCCTTTTGTT ATTGCCATCCAGAATGCGGGTATCTCTGGGCTGAACCACGTCGTCAACGCTGCTATCCTGATCTCAGCCTGGTCC TCGGGTAATGCATGGTTGTTCGCTGGTTCTCGAACCCTGTACTCGCTCGCCTGCGGCGGCCAGGCCCCCAAGATC TTCACCCGGTGCAACCGCAACGGCGTGCCTTACGTAGCCGTGCTGATCACCTGGGTGGTCGGCTTGCTGTCCTTC CTGAACCTGTCTGACTCAGGAGAGACTGTCTTCTACTGGTTCACGAACATCACCACAGTGGGAGGGTTTATTAAC TGGGTGCTCATTGGTATCACCTATCTGCGATTCCGCAAAGCCTTGACCTACCATGGACTGCTGGACACGCTCACT TTCAAGACCCCTCTGCAGCCCTACGGCACATACTACGTTATTGTCGTCGTGTCCCTCCTGACCATCACGAACGGA TATGCAGTTTTCTTCCCTGGCAACTTCACCGCCGCCGATTTCCTGGTGTCGTATATTGTGGTGGCCATCTTCCTG GCCCTCTATGTGGGCCACAAATTGTGGTACCGGACTCCATGGATGACAAAGGTGTCGGAGATTGACGTGTTCACG GGCAAAGAGGAGATTGACCAGCTCTGCGCGAACGACTTTGAACGGAAGCCACGCAATTGGCTGGAGAGGGTGTGG TGGTGGATTGCTTGA |
| Gene | >Ani_SJS72_1|g4994.t1 ATGGGTGCGCCGACGTTAAAGGACCTCGAAGAGTCCAAGACCGAGGTGACATCTCCAGTATATGTTGATGAAGAC CCCGAGGCCCTCAAGGGCGAGATCCACCATGGGCCAAACACAGACACTCAGCGTGGATTGTCTTCCCGACAGCTG CAGCTGCTTGCTCTTGGAGGTTGTATTGGGACCGGTCTATTCGTAGGTTCGGGATCCACGCTGTCGACGGTGGGC CCAGCACCACTGTTCATGGGCTACTGTGCCATGTCGTCGGTGGTGTGGTTTGTGATGAACGTGCTGGGCGAGATG ACCACCTATTTGCCCATCAAGGGCATTTCGGTGCCTTATATGATAGGCCGCTATACGGAGCCGAGTATTGGATTC GCTGCTGGTATGTCTCTTGCACTGTACCTGGCAGCTCCCATATTTCTCTTGCAGTGATATGCTAACTCAATTTAG GATATAATTATTGGTAGGCTCACATTATCTTCCGCTCACCAACTTACTCTGATCCTCATGTGTATTAGGTACTCT TTTGCCATGTTACTGGCAAGTGAAGTGACGGCTGCCGGGATCATCATCCAGTACTGGACCACCTCCATCAATGTC GGGGTGTGGATCACAATCATCCTCCTCGGTACGTATTCACCTCAACCTCCATCATCAGTAGGACATGATGAACGC TAACAACCACAGTGATTCTGCTACTCAACATTATTGCGGTGTCATGGTACGGAGAAGCCGAGTTCTGGTTTGCAA CGTTAAAGATCCTAGCCATCATTGGCCTGATTATCCTGGGTGTGGTGCTCTTCTTCGGCGGTGGTCCCAACCATG ATCGGCTAGGCTTCCGCTATTGGGATAACCCGGGCGCGTTCAATCCCTACTTGGTCGGTGGAAACACCGGTCGCT TCCTGGACTTCTGGACAGCTTTCATCAAGTCTGGCTTCTCCTTCATTTTCTCCCCCGAACTTATCACCACTGCCG CTGGTGAAGTTGAAGCACCCCGTCGCAATATCCCGAAAGCCACCAACCGGTTCATCTACCGAGTCTTTGCCTTCT ACATTCTGGGCACCCTCGTGATCGGTGTCACAGTCGCTTATAATGATCCTAAACTCATGTCCGCGGTTGCCAGCG GTAGCTCTAGCGCCAGTGCCAGTCCTTTTGTTATTGCCATCCAGAATGCGGGTATCTCTGGGCTGAACCACGTCG TCAACGCTGCTATCCTGATCTCAGCCTGGTCCTCGGGTAATGCATGGTTGTTCGCTGGTTCTCGAACCCTGTACT CGCTCGCCTGCGGCGGCCAGGCCCCCAAGATCTTCACCCGGTGCAACCGCAACGGCGTGCCTTACGTAGCCGTGC TGATCACCTGGGTGGTCGGCTTGCTGTCCTTCCTGAACCTGTCTGACTCAGGAGAGACTGTCTTCTACTGGTTCA CGAACATCACCACAGTGGGAGGGTTTATTAACTGGGTGCTCATTGGTATCACCTATCTGGTAAGTTATTTCCTTC GAGCTTTCTGCAGACCCGACTGACGAAATTCAGCGATTCCGCAAAGCCTTGACCTACCATGGACTGCTGGACACG CTCACTTTCAAGACCCCTCTGCAGCCCTACGGCACATACTACGTTATTGTCGTCGTGTCCCTCCTGACCATCACG AACGGATATGCAGTTTTCTTCCCTGGCAACTTCACCGCCGCCGATTTCCTGGTGTCGTATATTGTGGTGGCCATC TTCCTGGCCCTCTATGTGGGCCACAAATTGTGGTACCGGACTCCATGGATGACAAAGGTGTCGGAGATTGACGTG TTCACGGGCAAAGAGGAGATTGACCAGCTCTGCGCGAACGACTTTGAACGGAAGCCACGCAATTGGCTGGAGAGG GTGTGGTGGTGGATTGCTTGA |