Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ani_SJS72_1\|g4942.t1
Gene name
Location	scaffold_032:193402..194724
Strand	+
Gene length (bp)	1322
Transcript length (bp)	1041
Coding sequence length (bp)	1041
Protein length (aa)	347

PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 22	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	20	43	23
2	56	78	22
3	98	120	22
4	133	155	22
5	181	203	22
6	215	237	22
7	247	269	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ani_SJS72_1\|g4942.t1 MAGTSGVPMHLPDPAPPMVYTVRGVIGAFGLLTLIVCCLRLYLRGFITHAFGLDDCLVLLALCMVLVFAALSIIL TTYGIGYHQETVPTADMIMMEKYVYILFCLYLWVALAVKCSLTVFVMRVFPTKWIRRIGLGIMVLMAIVTVSGEL PLIFQCWPVQAAWDSTIPNSKCFSNAVLEDLQLYQAILMLLFDVSIITLPMPTIWKLQMPVQRRLFIIGLFCLGF VACSAGLARIPLLDFQVNSTDYTYVGAVPLILMNVEYALGLITGSLPSLRVLLRNIPGLNSSRKSTDPGRDWRNG PDHSGYHLSERGHWAHKSKRKGKVDLERCDNESQQQIIVTTTVEQE*
Coding	>Ani_SJS72_1\|g4942.t1 ATGGCCGGTACAAGTGGCGTTCCTATGCATCTTCCTGATCCGGCGCCTCCAATGGTATATACAGTGAGGGGAGTG ATTGGTGCATTCGGTCTTCTCACTCTGATCGTTTGCTGTCTCAGACTCTATCTTCGAGGGTTCATCACGCATGCA TTCGGCCTGGATGACTGTCTTGTTCTTCTTGCCTTGTGCATGGTCCTTGTGTTCGCAGCCCTCTCTATCATTCTC ACAACGTATGGAATTGGCTACCATCAGGAGACTGTTCCTACTGCAGATATGATCATGATGGAGAAGTACGTCTAT ATCTTGTTCTGCCTATATCTCTGGGTGGCCTTGGCTGTCAAATGTAGCCTTACTGTTTTCGTCATGCGCGTTTTT CCGACCAAATGGATCCGGCGGATTGGACTGGGAATCATGGTGCTCATGGCCATCGTCACCGTTTCGGGGGAATTA CCCTTGATCTTCCAGTGCTGGCCAGTGCAGGCAGCGTGGGACTCGACCATCCCAAACTCGAAGTGCTTTTCAAAT GCCGTGTTAGAGGACCTCCAGCTGTATCAGGCAATACTGATGTTATTATTCGATGTGAGCATCATCACTCTTCCA ATGCCAACGATCTGGAAGCTCCAAATGCCTGTTCAGCGCCGTCTATTCATTATTGGATTATTTTGTCTTGGATTC GTGGCCTGCAGTGCCGGTCTGGCACGCATTCCGCTATTGGATTTCCAAGTTAATTCGACCGACTATACATACGTC GGCGCGGTTCCACTCATATTGATGAATGTCGAATATGCGCTCGGCCTAATTACCGGCTCTTTACCTTCGCTGCGG GTTCTGCTTAGAAACATTCCGGGACTGAACAGCAGCAGAAAGAGCACCGATCCGGGCCGAGATTGGAGAAATGGC CCTGATCATAGCGGATATCATCTCAGCGAACGGGGTCATTGGGCCCATAAATCTAAAAGGAAGGGTAAAGTCGAT CTTGAAAGATGCGATAACGAAAGTCAGCAGCAGATTATCGTAACCACAACAGTAGAACAGGAATAG
Transcript	>Ani_SJS72_1\|g4942.t1 ATGGCCGGTACAAGTGGCGTTCCTATGCATCTTCCTGATCCGGCGCCTCCAATGGTATATACAGTGAGGGGAGTG ATTGGTGCATTCGGTCTTCTCACTCTGATCGTTTGCTGTCTCAGACTCTATCTTCGAGGGTTCATCACGCATGCA TTCGGCCTGGATGACTGTCTTGTTCTTCTTGCCTTGTGCATGGTCCTTGTGTTCGCAGCCCTCTCTATCATTCTC ACAACGTATGGAATTGGCTACCATCAGGAGACTGTTCCTACTGCAGATATGATCATGATGGAGAAGTACGTCTAT ATCTTGTTCTGCCTATATCTCTGGGTGGCCTTGGCTGTCAAATGTAGCCTTACTGTTTTCGTCATGCGCGTTTTT CCGACCAAATGGATCCGGCGGATTGGACTGGGAATCATGGTGCTCATGGCCATCGTCACCGTTTCGGGGGAATTA CCCTTGATCTTCCAGTGCTGGCCAGTGCAGGCAGCGTGGGACTCGACCATCCCAAACTCGAAGTGCTTTTCAAAT GCCGTGTTAGAGGACCTCCAGCTGTATCAGGCAATACTGATGTTATTATTCGATGTGAGCATCATCACTCTTCCA ATGCCAACGATCTGGAAGCTCCAAATGCCTGTTCAGCGCCGTCTATTCATTATTGGATTATTTTGTCTTGGATTC GTGGCCTGCAGTGCCGGTCTGGCACGCATTCCGCTATTGGATTTCCAAGTTAATTCGACCGACTATACATACGTC GGCGCGGTTCCACTCATATTGATGAATGTCGAATATGCGCTCGGCCTAATTACCGGCTCTTTACCTTCGCTGCGG GTTCTGCTTAGAAACATTCCGGGACTGAACAGCAGCAGAAAGAGCACCGATCCGGGCCGAGATTGGAGAAATGGC CCTGATCATAGCGGATATCATCTCAGCGAACGGGGTCATTGGGCCCATAAATCTAAAAGGAAGGGTAAAGTCGAT CTTGAAAGATGCGATAACGAAAGTCAGCAGCAGATTATCGTAACCACAACAGTAGAACAGGAATAG
Gene	>Ani_SJS72_1\|g4942.t1 ATGGCCGGTACAAGTGGCGTTCCTATGCATCTTCCTGATCCGGCGCCTCCAATGGTATATACAGTGAGGGGAGTG ATTGGTGCATTCGGTCTTCTCACTCTGATCGTTTGCTGTCTCAGAGTATGTTAACCTTTCTACAATGACAGCATA CACGAGCTGATCGACCTGCGTCTCCCTAGCTCTATCTTCGAGGGTTCATCACGCATGCATTCGGCCTGGATGACT GTCTTGTTCTTCTTGCCTTGGTATGTACGATTTTCTATGGGGGATGAAATTGAACCCACCCTTAACCGCACTGAG CAGTGCATGGTCCTTGTGTTCGCAGCCCTCTCTATCATTCTCACAACGTATGGAATTGGCTACCATCAGGAGACT GTTCCTACTGCAGATATGATCATGATGGAGAAGGTTAGTGCCTTGTCTGCCATTTGATTTCCTCTGGCTCACCGT TGTAGTACGTCTATATCTTGTTCTGCCTATATCTCTGGGTGGCCTTGGCTGTCAAATGTAGCCTTACTGTTTTCG TCATGCGCGTTTTTCCGACCAAATGGATCCGGCGGATTGGACTGGGAATCATGGTGCTCATGGCCATCGTCACCG TTTCGGGGGAATTACCCTTGATCTTCCAGTGCTGGCCAGTGCAGGCAGCGTGGGACTCGACCATCCCAAACTCGA AGTGCTTTTCAAATGCCGTGTTAGAGGACCTCCAGCTGTATCAGGCAATACTGATGTTATTATTCGATGTGAGCA TCATCACTCTTCCAATGCCAACGATCTGGAAGCTCCAAATGCCTGTTCAGCGCCGTCTATTCATTATTGGATTAT TTTGTCTTGGTATGTTTGCATAGTTGTCGGTTTCCTTTCCCTGAACATCCTAGACTAATTGATCGAAGGATTCGT GGCCTGCAGTGCCGGTCTGGCACGCATTCCGCTATTGGATTTCCAAGTTAATTCGACCGACTATACATGTATGAC GTCTCTTCTTTCCCTTGCTACAAACTTGCTCTACTAATCCACACATCATAGACGTCGGCGCGGTTCCACTCATAT TGATGAATGTCGAATATGCGCTCGGCCTAATTACCGGCTCTTTACCTTCGCTGCGGGTTCTGCTTAGAAACATTC CGGGACTGAACAGCAGCAGAAAGAGCACCGATCCGGGCCGAGATTGGAGAAATGGCCCTGATCATAGCGGATATC ATCTCAGCGAACGGGGTCATTGGGCCCATAAATCTAAAAGGAAGGGTAAAGTCGATCTTGAAAGATGCGATAACG AAAGTCAGCAGCAGATTATCGTAACCACAACAGTAGAACAGGAATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail