Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS72_1|g492.t1
Gene name
Locationscaffold_002:515913..517213
Strand-
Gene length (bp)1300
Transcript length (bp)909
Coding sequence length (bp)909
Protein length (aa) 303

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 32 0.5

Transmembrane Domains

Domain # Start End Length
1 17 39 22
2 68 90 22
3 97 119 22
4 139 161 22
5 180 202 22
6 212 234 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS72_1|g492.t1
MQQSFPARSECEDRGPLIVIINGTVTGLAAAIVALRFVSRLGVKYGTGKHDGTLTKVDKLPAAKIRYITHIIYTP
ITGLIKTSICLLYLRLFPNLRNIALGTIAFIAAMSIAIILATIFQCWPVDAVYNPQKYDHYTCFASIPFWYATAA
LSLVTDLWILGLPIRTILGLQIGSMKRVVVIGLLSLGTFACIASIVRMVYIIKLYESNDPSWSTFGVSVSSGIEV
AVAIIAASLPSTKPVMDLIFPRLFSTSADKSHTTSAQVYHNRTSARGHRQHDDISLVHLTMECDSGKDDSTTGLS
RA*
Coding >Ani_SJS72_1|g492.t1
ATGCAGCAAAGCTTTCCAGCACGCTCTGAGTGTGAGGACCGTGGGCCCTTGATCGTCATCATCAATGGGACCGTA
ACTGGACTCGCAGCGGCCATCGTTGCCCTGCGATTCGTATCCCGACTTGGAGTCAAATATGGTACGGGGAAACAT
GATGGCACTCTCACAAAGGTCGATAAGTTACCAGCAGCCAAGATTCGCTACATTACTCATATTATCTACACTCCC
ATCACGGGCCTGATCAAGACGTCCATCTGCCTATTATATCTGCGTCTCTTCCCAAATCTTCGCAATATCGCTCTT
GGCACCATAGCTTTCATCGCCGCCATGAGCATTGCCATTATCCTCGCCACCATTTTTCAATGCTGGCCCGTAGAT
GCAGTGTACAACCCTCAGAAATACGACCACTATACCTGTTTCGCGTCTATTCCTTTTTGGTACGCCACGGCCGCA
TTATCACTGGTTACGGATCTGTGGATCCTCGGTTTACCGATCCGGACTATTTTAGGCCTACAAATTGGGAGTATG
AAGCGTGTGGTAGTCATCGGTCTGTTATCCTTGGGAACGTTCGCCTGCATTGCCAGCATCGTTCGAATGGTGTAC
ATCATCAAGCTTTATGAGAGCAATGATCCAAGCTGGAGCACATTCGGCGTCTCCGTGTCGTCAGGAATCGAAGTT
GCTGTTGCCATCATTGCAGCCAGCCTGCCAAGCACCAAGCCGGTCATGGATCTGATCTTCCCAAGACTATTCTCT
ACCAGTGCCGACAAGTCCCATACCACTAGTGCACAAGTGTACCATAATCGGACCTCTGCCCGCGGTCATCGCCAG
CATGATGACATCTCGCTTGTTCATCTAACCATGGAATGTGATTCCGGGAAGGATGACTCTACCACTGGACTTTCT
CGTGCTTAG
Transcript >Ani_SJS72_1|g492.t1
ATGCAGCAAAGCTTTCCAGCACGCTCTGAGTGTGAGGACCGTGGGCCCTTGATCGTCATCATCAATGGGACCGTA
ACTGGACTCGCAGCGGCCATCGTTGCCCTGCGATTCGTATCCCGACTTGGAGTCAAATATGGTACGGGGAAACAT
GATGGCACTCTCACAAAGGTCGATAAGTTACCAGCAGCCAAGATTCGCTACATTACTCATATTATCTACACTCCC
ATCACGGGCCTGATCAAGACGTCCATCTGCCTATTATATCTGCGTCTCTTCCCAAATCTTCGCAATATCGCTCTT
GGCACCATAGCTTTCATCGCCGCCATGAGCATTGCCATTATCCTCGCCACCATTTTTCAATGCTGGCCCGTAGAT
GCAGTGTACAACCCTCAGAAATACGACCACTATACCTGTTTCGCGTCTATTCCTTTTTGGTACGCCACGGCCGCA
TTATCACTGGTTACGGATCTGTGGATCCTCGGTTTACCGATCCGGACTATTTTAGGCCTACAAATTGGGAGTATG
AAGCGTGTGGTAGTCATCGGTCTGTTATCCTTGGGAACGTTCGCCTGCATTGCCAGCATCGTTCGAATGGTGTAC
ATCATCAAGCTTTATGAGAGCAATGATCCAAGCTGGAGCACATTCGGCGTCTCCGTGTCGTCAGGAATCGAAGTT
GCTGTTGCCATCATTGCAGCCAGCCTGCCAAGCACCAAGCCGGTCATGGATCTGATCTTCCCAAGACTATTCTCT
ACCAGTGCCGACAAGTCCCATACCACTAGTGCACAAGTGTACCATAATCGGACCTCTGCCCGCGGTCATCGCCAG
CATGATGACATCTCGCTTGTTCATCTAACCATGGAATGTGATTCCGGGAAGGATGACTCTACCACTGGACTTTCT
CGTGCTTAG
Gene >Ani_SJS72_1|g492.t1
ATGCAGCAAAGCTTTCCAGCACGCTCTGAGGCAAGTGCTTAAGCTTGTGGACGGTGCTCATACTGATTTTCGGCT
TAGTGTGAGGACCGTGGGCCCTTGATCGTCATCATCAATGGGACCGTAACTGGACTCGCAGCGGCCATCGTTGCC
CTGCGATTCGTATCCCGTGCTGTGATTGTGAAGCGGCTAGGATTGGATGACTGGACGATGATGCTCGCCACAGTC
ACGGCCATTTGAATGTTGCCATTGCAGGACTTGGTATGTACTTGGACCTCAGGTCGGAGTACTGCAACTCATGCC
AAATGTTCTCCTAGGAGTCAAATATGGTACGGGGAAACATGATGGCACTCTCACAAAGGTCGATAAGTTACCAGC
AGCCAAGGTGCGCCCGCATGCTCGGGAATATTTCCAACCCTCCCAATCGCAATCCAGATTCTGACCAGCGGCATG
ATTGCCTGTAGATTCGCTACATTACTCATATTATCTACACTCCCATCACGGGCCTGATCAAGACGTCCATCTGCC
TATTATATCTGCGTCTCTTCCCAAATCTTCGCAATATCGCTCTTGGCACCATAGCTTTCATCGCCGCCATGAGCA
TTGCCATTATCCTCGCCACCATTTTTCAATGCTGGCCCGTAGATGCAGTGTACAACCCTCAGAAATACGACCACT
ATACCTGTTTCGCGTCTATTCCTTTTTGGTACGCCACGGCCGCATTATCACTGGTTACGGATCTGTGGATCCTCG
GTTTACCGATCCGGACTATTTTAGGTGCGTTCATACACAAAGGGGGGCTGGTTAGAGACGGCCGCACAGCAATTA
CTCATGAGTGCAGGCCTACAAATTGGGAGTATGAAGCGTGTGGTAGTCATCGGTCTGTTATCCTTGGGAACGTTG
TAAGGATACCATCGGAACGATTTGTAGAACATATCTGTCTAACAGGTTACCATGCAGCGCCTGCATTGCCAGCAT
CGTTCGAATGGTGTACATCATCAAGCTTTATGAGAGCAATGATCCAAGCTGGAGCACATTCGGCGTCTCCGTGTC
GTCAGGAATCGAAGTTGCTGTTGCCATCATTGCAGCCAGCCTGCCAAGCACCAAGCCGGTCATGGATCTGATCTT
CCCAAGACTATTCTCTACCAGTGCCGACAAGTCCCATACCACTAGTGCACAAGTGTACCATAATCGGACCTCTGC
CCGCGGTCATCGCCAGCATGATGACATCTCGCTTGTTCATCTAACCATGGAATGTGATTCCGGGAAGGATGACTC
TACCACTGGACTTTCTCGTGCTTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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