Protein ID | Ani_SJS72_1|g4869.t1 |
Gene name | |
Location | scaffold_031:281916..283439 |
Strand | - |
Gene length (bp) | 1523 |
Transcript length (bp) | 1113 |
Coding sequence length (bp) | 1113 |
Protein length (aa) | 371 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 10 | 30 | 20 |
2 | 43 | 65 | 22 |
3 | 88 | 110 | 22 |
4 | 123 | 145 | 22 |
5 | 176 | 198 | 22 |
6 | 205 | 224 | 19 |
7 | 244 | 266 | 22 |
Orthofinder run ID | 3 |
Orthogroup | 9499 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS72_1|g4869.t1 MPADKGPQITAVSWSFGGVAIIVVTIRLYTRLILTRKAGWDDFFIVLSLLSAIVCSGLAQTGVHYGLGKHMADIS NAEWKIEAFKYTVIAPNFSMVSTTTGKLSVAVFLLRLMGQTASPAKRWFLYIFSIISVAWNVLAIVAIMGYCRPA EKIWRPEVPGSCFSLKFQLIAGISQASFNAFADLTLALFPIIIFWSVQLPWKMKLGVIAVMGAGILVLGRYYNMV LVSHSHLHESSGAHPVHRQMYVIIICATLPTLRQSYNFALHRTRYLGSYYKGSHSEAAAAAAARQKPIPLLRRQP DQSLFEKFADETGLVNVASHEDSHVSPERGSNHTSITKTTEIEVHEESKSKGDIENPHFPRANPFRTDHQ* |
Coding | >Ani_SJS72_1|g4869.t1 ATGCCTGCCGACAAAGGCCCTCAGATAACTGCTGTGTCATGGAGCTTTGGGGGCGTGGCAATCATAGTCGTCACC ATTCGACTGTATACCCGGCTGATACTGACTCGCAAAGCAGGCTGGGACGACTTCTTCATTGTTCTTTCCCTGTTG AGCGCTATTGTATGTTCAGGGCTAGCCCAAACCGGCGTGCATTATGGGTTGGGGAAACACATGGCCGACATCTCC AATGCCGAATGGAAAATCGAGGCTTTTAAGTACACCGTCATCGCACCAAACTTCTCCATGGTCAGCACCACAACA GGAAAGCTATCCGTGGCCGTCTTCCTTCTACGCCTGATGGGTCAGACGGCTTCTCCGGCAAAACGATGGTTCCTC TACATCTTCAGTATAATATCTGTCGCCTGGAATGTGCTGGCCATTGTTGCCATCATGGGGTATTGCCGGCCTGCG GAGAAGATCTGGCGGCCTGAGGTTCCTGGATCCTGCTTCAGCTTGAAATTCCAGCTGATCGCTGGTATATCGCAA GCCTCATTCAACGCATTCGCCGACCTTACCTTAGCCTTGTTTCCAATTATCATCTTCTGGTCCGTCCAGCTGCCC TGGAAAATGAAGCTAGGTGTTATAGCCGTTATGGGCGCGGGAATCTTGGTCTTGGGCCGATATTACAACATGGTA CTCGTAAGCCACTCACATCTCCATGAATCGAGTGGCGCCCATCCGGTTCATCGACAGATGTATGTGATCATCATC TGCGCCACTCTCCCTACCCTCCGACAATCATACAACTTTGCCTTGCATCGAACACGCTATCTGGGTTCATACTAC AAAGGCTCCCACTCCGAAGCAGCAGCAGCAGCAGCAGCACGACAGAAGCCTATTCCTCTCCTTCGGCGCCAACCC GATCAGTCGCTTTTCGAGAAATTCGCTGACGAAACCGGTCTGGTGAATGTAGCCTCTCACGAAGATAGCCACGTC TCGCCTGAAAGGGGTTCAAATCATACGTCCATCACAAAGACTACGGAGATTGAGGTCCACGAGGAGAGCAAGTCC AAAGGGGATATCGAGAATCCTCACTTCCCGCGAGCGAACCCCTTTAGGACAGATCATCAGTAG |
Transcript | >Ani_SJS72_1|g4869.t1 ATGCCTGCCGACAAAGGCCCTCAGATAACTGCTGTGTCATGGAGCTTTGGGGGCGTGGCAATCATAGTCGTCACC ATTCGACTGTATACCCGGCTGATACTGACTCGCAAAGCAGGCTGGGACGACTTCTTCATTGTTCTTTCCCTGTTG AGCGCTATTGTATGTTCAGGGCTAGCCCAAACCGGCGTGCATTATGGGTTGGGGAAACACATGGCCGACATCTCC AATGCCGAATGGAAAATCGAGGCTTTTAAGTACACCGTCATCGCACCAAACTTCTCCATGGTCAGCACCACAACA GGAAAGCTATCCGTGGCCGTCTTCCTTCTACGCCTGATGGGTCAGACGGCTTCTCCGGCAAAACGATGGTTCCTC TACATCTTCAGTATAATATCTGTCGCCTGGAATGTGCTGGCCATTGTTGCCATCATGGGGTATTGCCGGCCTGCG GAGAAGATCTGGCGGCCTGAGGTTCCTGGATCCTGCTTCAGCTTGAAATTCCAGCTGATCGCTGGTATATCGCAA GCCTCATTCAACGCATTCGCCGACCTTACCTTAGCCTTGTTTCCAATTATCATCTTCTGGTCCGTCCAGCTGCCC TGGAAAATGAAGCTAGGTGTTATAGCCGTTATGGGCGCGGGAATCTTGGTCTTGGGCCGATATTACAACATGGTA CTCGTAAGCCACTCACATCTCCATGAATCGAGTGGCGCCCATCCGGTTCATCGACAGATGTATGTGATCATCATC TGCGCCACTCTCCCTACCCTCCGACAATCATACAACTTTGCCTTGCATCGAACACGCTATCTGGGTTCATACTAC AAAGGCTCCCACTCCGAAGCAGCAGCAGCAGCAGCAGCACGACAGAAGCCTATTCCTCTCCTTCGGCGCCAACCC GATCAGTCGCTTTTCGAGAAATTCGCTGACGAAACCGGTCTGGTGAATGTAGCCTCTCACGAAGATAGCCACGTC TCGCCTGAAAGGGGTTCAAATCATACGTCCATCACAAAGACTACGGAGATTGAGGTCCACGAGGAGAGCAAGTCC AAAGGGGATATCGAGAATCCTCACTTCCCGCGAGCGAACCCCTTTAGGACAGATCATCAGTAG |
Gene | >Ani_SJS72_1|g4869.t1 ATGCCTGCCGACAAAGGCCCTCAGATAACTGCTGTGTCATGGAGCTTTGGGGGCGTGGCAATCATAGTCGTCACC ATTCGACTGTATACCCGGCTGATACTGACTCGCAAAGCAGGCTGGGACGACTTCTTCATTGTTCTTTCCCTGGTA AGCTACCCCTGCAAGAGCCTCCTGTATAATACATCGGCTAACCCAGACGGTGCATGGATGCAGTTGAGCGCTATT GTATGTTCAGGGCTAGCCCAAACCGGCGTGCATTATGGGTTGGGGAAACACATGGCCGACATCTCCAATGCCGAA TGGAAAATCGAGGCTTTTAAGTACACCGTCATCGCACCAAACTTCTCCATGGTCAGCACCACAACAGGAAAGCTA TCCGTGGCCGTCTTCCTTCTACGCCTGATGGGTCAGACGGCTTCTCCGGCAAAACGATGGTTCCTCTACATCTTC AGTATAATATCTGTCGCCTGGAATGTGCTGGCCATTGTTGCCATCATGGGGTATTGCCGGCCTGCGGAGAAGATC TGGCGGCCTGAGGTTCCTGGATCCTGCTTCAGCTTGAAATTCCAGCTGATCGCTGGTATATCGCAAGCCTGTGAG CGTCAACACTGCCTATTGACGACACATTGAGCTAAGACTGCCGCACAGCATTCAACGCATTCGCCGACCTTACCT TAGCCTTGTTTCCAATTATCATCTTCTGGTCCGTCCAGCTGCCCTGGAAAATGAAGCTAGGTGTTATAGCCGTTA TGGGCGCGGGAATCTTGTAAGCACCTCCAATACAGCCAAAGAAACTCTACTCATTCCAAAAAGGGCGGCGGCAGC AACCTTGGTTAAGGCCATTCTGCTAAAAAGTCTTCCGGCCCATTCAGACATAACTTGTGAGCACCAAATTCGCGG GCGGGCCCAGACACATAAGAAAAAGCTTAACATAGAACTCCAGGGTCTTGGGCCGATATTACAACATGGTACTCG TAAGCCACTCACATCTCCATGGTTCGTTATTAGTAAACCAAAACAAAACAAGCTAACACCATCCTCTCCGCACCA CTAGAATCGAGGTAAGCAGGAACCTTCATCTCAGCAAAGCCTAGCTATACTTTTATCATGCGCTAAGTGGCGCCC ATCCGGTTCATCGACAGATGTATGTGATCATCATCTGCGCCACTCTCCCTACCCTCCGACAATCATACAACTTTG CCTTGCATCGAACACGCTATCTGGGTTCATACTACAAAGGCTCCCACTCCGAAGCAGCAGCAGCAGCAGCAGCAC GACAGAAGCCTATTCCTCTCCTTCGGCGCCAACCCGATCAGTCGCTTTTCGAGAAATTCGCTGACGAAACCGGTC TGGTGAATGTAGCCTCTCACGAAGATAGCCACGTCTCGCCTGAAAGGGGTTCAAATCATACGTCCATCACAAAGA CTACGGAGATTGAGGTCCACGAGGAGAGCAAGTCCAAAGGGGATATCGAGAATCCTCACTTCCCGCGAGCGAACC CCTTTAGGACAGATCATCAGTAG |