Protein ID | Ani_SJS72_1|g4841.t1 |
Gene name | |
Location | scaffold_031:191352..193338 |
Strand | - |
Gene length (bp) | 1986 |
Transcript length (bp) | 1929 |
Coding sequence length (bp) | 1929 |
Protein length (aa) | 643 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF01008 | IF-2B | Initiation factor 2 subunit family | 1.9E-74 | 298 | 629 |
GO Term | Description | Terminal node |
---|---|---|
GO:0044237 | cellular metabolic process | Yes |
GO:0009987 | cellular process | No |
GO:0008150 | biological_process | No |
GO:0008152 | metabolic process | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 14 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 7 | 29 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS72_1|g4841.t1 MLLLEKLLALGSAVVQYLSVLVVVTAAYVKQQQQSVSQRRERVSSPAHPTTSTSSSTSSSAEKVSNAPPDRLDSP PPSSYYTFPLLMATPVDSSQPPAEMQSQQSSSSPGAAAAAAGANASAKPAKPQQSQPAKQQSQQQQSQSKGKDTA AAGGDGAALSPAELKKKAKAEKAARRARERAEREQSGGGAAAPGGGQSAAGGKKGASGPGGAGAGGKDASGAATP QKGGHQKQLPRRGSAQATGQLGAAELKKKQEEKNVSVFGHLYGQQRRTTIAGAGKEVHPAVLALGMQMRDYVVCG SSARCVATLLAFKRVIEAYTTPLGTSLARHLTTHLSHQITYLSTCRPLSISQGNAIRALKLAISSIDPSVPEATA KASLCDFIDSFIREKITVADQVIAGSAAQKIQDGDVIVTFAGSSIVKQTLLAAHKEGKQFRVSIIDSRPLFEGKN LARTLANAGLDVQYSLMNGISHAIKDATKVFLGAHAMTSNGRLYSRVGTALVAMSAKERAGGVEVPVIVCCETVK FTDRVALDSIVVNEIADADELVTVEPVQQLTGLPDPAAQPAVEPKKGGKASSAPVETSTAAQSKSSPLEDWKESA NLQLLNIMYDVTPAEYVDMVVTEMGSLPPSAVPIVHRMSTNM* |
Coding | >Ani_SJS72_1|g4841.t1 ATGCTACTCTTAGAGAAGCTCCTTGCACTGGGAAGCGCCGTGGTGCAATACTTGAGTGTTTTAGTGGTGGTGACA GCAGCTTATGTGAAGCAGCAGCAGCAAAGCGTGAGTCAACGACGGGAACGGGTTTCATCGCCGGCTCACCCCACA ACATCCACTTCTTCTTCCACTTCCTCCTCCGCCGAAAAAGTCTCCAATGCCCCTCCCGATCGCCTCGATTCTCCC CCTCCGTCCTCCTACTACACATTTCCTCTCCTAATGGCGACCCCCGTTGACTCCTCACAACCCCCGGCTGAAATG CAATCCCAGCAATCATCATCATCCCCAGGCGCTGCCGCTGCTGCCGCCGGCGCCAACGCCTCCGCTAAGCCCGCT AAACCGCAGCAATCACAGCCCGCCAAGCAACAATCACAACAGCAACAATCACAATCCAAAGGAAAGGATACTGCC GCCGCTGGTGGAGATGGTGCCGCGCTCTCCCCCGCCGAATTGAAGAAGAAAGCCAAAGCTGAAAAGGCCGCCCGT CGCGCTCGCGAACGCGCCGAACGTGAACAGTCCGGTGGTGGTGCTGCTGCGCCCGGTGGGGGTCAGTCAGCTGCT GGTGGTAAGAAGGGCGCGTCGGGTCCTGGTGGTGCTGGGGCTGGTGGGAAGGATGCTTCTGGTGCTGCGACGCCT CAGAAGGGTGGTCATCAGAAACAGTTGCCTCGCCGGGGTTCGGCGCAGGCGACCGGCCAGCTGGGGGCGGCGGAG TTGAAGAAGAAGCAGGAAGAGAAGAATGTCTCGGTCTTTGGACATCTGTATGGTCAGCAGCGCAGGACTACGATT GCTGGCGCTGGAAAGGAAGTTCATCCGGCGGTTTTGGCGCTGGGCATGCAGATGAGAGATTATGTGGTTTGTGGT AGTAGTGCCAGATGTGTTGCTACTTTGTTGGCTTTCAAGAGGGTTATCGAAGCTTATACTACCCCCTTGGGCACC TCGCTCGCTCGCCACTTGACTACCCACCTCTCGCACCAGATTACCTACCTCTCTACATGTCGTCCCTTGTCTATC AGTCAGGGTAACGCTATTCGCGCCCTTAAGCTCGCCATCTCTTCCATTGATCCGTCTGTCCCCGAAGCCACCGCC AAGGCCTCGCTGTGCGATTTCATCGACAGTTTCATCCGTGAAAAGATCACCGTCGCCGACCAGGTCATTGCCGGC AGCGCAGCACAGAAGATTCAGGATGGAGACGTGATCGTGACATTTGCGGGCAGCTCGATCGTGAAGCAGACGCTG TTGGCAGCACACAAGGAGGGCAAGCAATTCCGCGTTTCCATCATCGACTCGCGACCCCTGTTCGAGGGTAAGAAC CTGGCGCGCACGCTCGCCAACGCCGGTCTGGACGTGCAATATTCCCTCATGAACGGTATCAGCCACGCCATCAAA GACGCCACTAAAGTGTTCCTGGGCGCCCACGCCATGACCAGCAACGGTCGCCTGTACTCGCGCGTCGGCACCGCG CTGGTCGCCATGTCAGCCAAGGAGCGCGCCGGCGGCGTCGAGGTTCCCGTCATCGTATGCTGCGAGACAGTCAAA TTCACAGACCGCGTCGCGCTGGACAGTATCGTCGTCAACGAGATCGCGGACGCCGACGAGCTGGTTACGGTCGAG CCGGTGCAGCAGCTGACCGGGTTGCCGGATCCCGCAGCGCAGCCGGCCGTAGAGCCCAAGAAGGGCGGCAAGGCC AGCAGTGCGCCGGTGGAGACGAGCACGGCGGCACAGAGCAAGTCGTCGCCGCTGGAGGATTGGAAGGAGTCGGCG AATCTGCAGCTGCTGAATATCATGTACGATGTGACGCCGGCGGAGTATGTGGATATGGTGGTGACGGAGATGGGC AGTCTGCCGCCGAGTGCAGTACCTATAGTGCATCGGATGAGTACGAATATGTAG |
Transcript | >Ani_SJS72_1|g4841.t1 ATGCTACTCTTAGAGAAGCTCCTTGCACTGGGAAGCGCCGTGGTGCAATACTTGAGTGTTTTAGTGGTGGTGACA GCAGCTTATGTGAAGCAGCAGCAGCAAAGCGTGAGTCAACGACGGGAACGGGTTTCATCGCCGGCTCACCCCACA ACATCCACTTCTTCTTCCACTTCCTCCTCCGCCGAAAAAGTCTCCAATGCCCCTCCCGATCGCCTCGATTCTCCC CCTCCGTCCTCCTACTACACATTTCCTCTCCTAATGGCGACCCCCGTTGACTCCTCACAACCCCCGGCTGAAATG CAATCCCAGCAATCATCATCATCCCCAGGCGCTGCCGCTGCTGCCGCCGGCGCCAACGCCTCCGCTAAGCCCGCT AAACCGCAGCAATCACAGCCCGCCAAGCAACAATCACAACAGCAACAATCACAATCCAAAGGAAAGGATACTGCC GCCGCTGGTGGAGATGGTGCCGCGCTCTCCCCCGCCGAATTGAAGAAGAAAGCCAAAGCTGAAAAGGCCGCCCGT CGCGCTCGCGAACGCGCCGAACGTGAACAGTCCGGTGGTGGTGCTGCTGCGCCCGGTGGGGGTCAGTCAGCTGCT GGTGGTAAGAAGGGCGCGTCGGGTCCTGGTGGTGCTGGGGCTGGTGGGAAGGATGCTTCTGGTGCTGCGACGCCT CAGAAGGGTGGTCATCAGAAACAGTTGCCTCGCCGGGGTTCGGCGCAGGCGACCGGCCAGCTGGGGGCGGCGGAG TTGAAGAAGAAGCAGGAAGAGAAGAATGTCTCGGTCTTTGGACATCTGTATGGTCAGCAGCGCAGGACTACGATT GCTGGCGCTGGAAAGGAAGTTCATCCGGCGGTTTTGGCGCTGGGCATGCAGATGAGAGATTATGTGGTTTGTGGT AGTAGTGCCAGATGTGTTGCTACTTTGTTGGCTTTCAAGAGGGTTATCGAAGCTTATACTACCCCCTTGGGCACC TCGCTCGCTCGCCACTTGACTACCCACCTCTCGCACCAGATTACCTACCTCTCTACATGTCGTCCCTTGTCTATC AGTCAGGGTAACGCTATTCGCGCCCTTAAGCTCGCCATCTCTTCCATTGATCCGTCTGTCCCCGAAGCCACCGCC AAGGCCTCGCTGTGCGATTTCATCGACAGTTTCATCCGTGAAAAGATCACCGTCGCCGACCAGGTCATTGCCGGC AGCGCAGCACAGAAGATTCAGGATGGAGACGTGATCGTGACATTTGCGGGCAGCTCGATCGTGAAGCAGACGCTG TTGGCAGCACACAAGGAGGGCAAGCAATTCCGCGTTTCCATCATCGACTCGCGACCCCTGTTCGAGGGTAAGAAC CTGGCGCGCACGCTCGCCAACGCCGGTCTGGACGTGCAATATTCCCTCATGAACGGTATCAGCCACGCCATCAAA GACGCCACTAAAGTGTTCCTGGGCGCCCACGCCATGACCAGCAACGGTCGCCTGTACTCGCGCGTCGGCACCGCG CTGGTCGCCATGTCAGCCAAGGAGCGCGCCGGCGGCGTCGAGGTTCCCGTCATCGTATGCTGCGAGACAGTCAAA TTCACAGACCGCGTCGCGCTGGACAGTATCGTCGTCAACGAGATCGCGGACGCCGACGAGCTGGTTACGGTCGAG CCGGTGCAGCAGCTGACCGGGTTGCCGGATCCCGCAGCGCAGCCGGCCGTAGAGCCCAAGAAGGGCGGCAAGGCC AGCAGTGCGCCGGTGGAGACGAGCACGGCGGCACAGAGCAAGTCGTCGCCGCTGGAGGATTGGAAGGAGTCGGCG AATCTGCAGCTGCTGAATATCATGTACGATGTGACGCCGGCGGAGTATGTGGATATGGTGGTGACGGAGATGGGC AGTCTGCCGCCGAGTGCAGTACCTATAGTGCATCGGATGAGTACGAATATGTAG |
Gene | >Ani_SJS72_1|g4841.t1 ATGCTACTCTTAGAGAAGCTCCTTGCACTGGGAAGCGCCGTGGTGCAATACTTGAGTGTTTTAGTGGTGGTGACA GCAGCTTATGTGAAGCAGCAGCAGCAAAGCGTGAGTCAACGACGGGAACGGGTTTCATCGCCGGCTCACCCCACA ACATCCACTTCTTCTTCCACTTCCTCCTCCGCCGAAAAAGTCTCCAATGCCCCTCCCGATCGCCTCGATTCTCCC CCTCCGTCCTCCTACTACACATTTCCTCTCCTAATGGCGACCCCCGTTGACTCCTCACAACCCCCGGCTGAAATG CAATCCCAGCAATCATCATCATCCCCAGGCGCTGCCGCTGCTGCCGCCGGCGCCAACGCCTCCGCTAAGCCCGCT AAACCGCAGCAATCACAGCCCGCCAAGCAACAATCACAACAGCAACAATCACAATCCAAAGGAAAGGATACTGCC GCCGCTGGTGGAGATGGTGCCGCGCTCTCCCCCGCCGAATTGAAGAAGAAAGCCAAAGCTGAAAAGGCCGCCCGT CGCGCTCGCGAACGCGCCGAACGTGAACAGTCCGGTGGTGGTGCTGCTGCGCCCGGTGGGGGTCAGTCAGCTGCT GGTGGTAAGAAGGGCGCGTCGGGTCCTGGTGGTGCTGGGGCTGGTGGGAAGGATGCTTCTGGTGCTGCGACGCCT CAGAAGGGTGGTCATCAGAAACAGTTGCCTCGCCGGGGTTCGGCGCAGGCGACCGGCCAGCTGGGGGCGGCGGAG TTGAAGAAGAAGCAGGAAGAGAAGAATGTCTCGGTCTTTGGACATCTGTATGGTCAGCAGCGCAGGACTACGATT GCTGGCGCTGGAAAGGAAGTTCATCCGGCGGTTTTGGCGCTGGGCATGCAGATGAGAGATTATGTGGTTTGTGGT AGTAGTGCCAGATGTGTTGCTACTTTGTTGGCTTTCAAGAGGGTATGTCTTTATTCTACTGATATGCTGTGGGGC TCAGGATGTGTTAACGTTTGTCAGGTTATCGAAGCTTATACTACCCCCTTGGGCACCTCGCTCGCTCGCCACTTG ACTACCCACCTCTCGCACCAGATTACCTACCTCTCTACATGTCGTCCCTTGTCTATCAGTCAGGGTAACGCTATT CGCGCCCTTAAGCTCGCCATCTCTTCCATTGATCCGTCTGTCCCCGAAGCCACCGCCAAGGCCTCGCTGTGCGAT TTCATCGACAGTTTCATCCGTGAAAAGATCACCGTCGCCGACCAGGTCATTGCCGGCAGCGCAGCACAGAAGATT CAGGATGGAGACGTGATCGTGACATTTGCGGGCAGCTCGATCGTGAAGCAGACGCTGTTGGCAGCACACAAGGAG GGCAAGCAATTCCGCGTTTCCATCATCGACTCGCGACCCCTGTTCGAGGGTAAGAACCTGGCGCGCACGCTCGCC AACGCCGGTCTGGACGTGCAATATTCCCTCATGAACGGTATCAGCCACGCCATCAAAGACGCCACTAAAGTGTTC CTGGGCGCCCACGCCATGACCAGCAACGGTCGCCTGTACTCGCGCGTCGGCACCGCGCTGGTCGCCATGTCAGCC AAGGAGCGCGCCGGCGGCGTCGAGGTTCCCGTCATCGTATGCTGCGAGACAGTCAAATTCACAGACCGCGTCGCG CTGGACAGTATCGTCGTCAACGAGATCGCGGACGCCGACGAGCTGGTTACGGTCGAGCCGGTGCAGCAGCTGACC GGGTTGCCGGATCCCGCAGCGCAGCCGGCCGTAGAGCCCAAGAAGGGCGGCAAGGCCAGCAGTGCGCCGGTGGAG ACGAGCACGGCGGCACAGAGCAAGTCGTCGCCGCTGGAGGATTGGAAGGAGTCGGCGAATCTGCAGCTGCTGAAT ATCATGTACGATGTGACGCCGGCGGAGTATGTGGATATGGTGGTGACGGAGATGGGCAGTCTGCCGCCGAGTGCA GTACCTATAGTGCATCGGATGAGTACGAATATGTAG |