© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ani_SJS72_1|g4829.t1 |
| Gene name | |
| Location | scaffold_031:162071..162690 |
| Strand | + |
| Gene length (bp) | 619 |
| Transcript length (bp) | 537 |
| Coding sequence length (bp) | 537 |
| Protein length (aa) | 179 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF10502 | Peptidase_S26 | Signal peptidase, peptidase S26 | 8.9E-11 | 27 | 104 |
| PF10502 | Peptidase_S26 | Signal peptidase, peptidase S26 | 1.4E-07 | 117 | 159 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0004252 | serine-type endopeptidase activity | Yes |
| GO:0006465 | signal peptide processing | Yes |
| GO:0071704 | organic substance metabolic process | No |
| GO:0008150 | biological_process | No |
| GO:0008152 | metabolic process | No |
| GO:0006508 | proteolysis | No |
| GO:0051604 | protein maturation | No |
| GO:0034641 | cellular nitrogen compound metabolic process | No |
| GO:0008233 | peptidase activity | No |
| GO:0008236 | serine-type peptidase activity | No |
| GO:0019538 | protein metabolic process | No |
| GO:0003674 | molecular_function | No |
| GO:0017171 | serine hydrolase activity | No |
| GO:0043603 | cellular amide metabolic process | No |
| GO:0009987 | cellular process | No |
| GO:0016485 | protein processing | No |
| GO:1901564 | organonitrogen compound metabolic process | No |
| GO:0006518 | peptide metabolic process | No |
| GO:0003824 | catalytic activity | No |
| GO:0016787 | hydrolase activity | No |
| GO:0044238 | primary metabolic process | No |
| GO:0043170 | macromolecule metabolic process | No |
| GO:0006807 | nitrogen compound metabolic process | No |
| GO:0044237 | cellular metabolic process | No |
| GO:0004175 | endopeptidase activity | No |
| GO:0140096 | catalytic activity, acting on a protein | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 30 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 20 | 39 | 19 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g4829.t1 MDRFLRYTLKRSTPGHLFRFGLNSLGVFCACTLIWEHLITVQLSEGPSMYPTFSPRGDYLLISRVHKHGRGIQVG DVVRFYHPTFLGVNGAKRVIGLPGDFVCRDLPFSREVGGEGEMIRVPEGHVYLAGDNLPWSRDSRNYGPIPMALI NGKIIARVWPLHKFEWVKNTLETADLSE* |
| Coding | >Ani_SJS72_1|g4829.t1 ATGGACCGCTTCCTCCGCTACACCCTAAAACGCAGCACCCCGGGCCATCTATTCCGCTTCGGCCTCAACAGCCTG GGAGTGTTCTGCGCATGCACACTAATCTGGGAACACCTGATCACTGTCCAACTGAGCGAAGGTCCATCGATGTAC CCGACTTTCAGTCCGCGAGGCGACTACCTTCTCATATCGCGAGTGCACAAGCACGGCCGGGGGATTCAGGTTGGC GACGTGGTGCGGTTCTATCATCCGACGTTTTTGGGGGTGAATGGGGCGAAGAGGGTCATTGGGTTGCCGGGGGAT TTTGTGTGTAGGGATTTGCCGTTTAGTAGGGAGGTTGGTGGGGAGGGGGAGATGATCAGGGTTCCTGAAGGGCAT GTCTATCTTGCTGGGGATAATTTGCCGTGGTCGAGGGATTCCAGGAATTATGGCCCTATACCGATGGCGCTTATA AATGGGAAGATTATCGCGCGGGTGTGGCCGTTGCATAAGTTTGAGTGGGTGAAGAATACGTTGGAGACGGCGGAT TTGTCGGAGTGA |
| Transcript | >Ani_SJS72_1|g4829.t1 ATGGACCGCTTCCTCCGCTACACCCTAAAACGCAGCACCCCGGGCCATCTATTCCGCTTCGGCCTCAACAGCCTG GGAGTGTTCTGCGCATGCACACTAATCTGGGAACACCTGATCACTGTCCAACTGAGCGAAGGTCCATCGATGTAC CCGACTTTCAGTCCGCGAGGCGACTACCTTCTCATATCGCGAGTGCACAAGCACGGCCGGGGGATTCAGGTTGGC GACGTGGTGCGGTTCTATCATCCGACGTTTTTGGGGGTGAATGGGGCGAAGAGGGTCATTGGGTTGCCGGGGGAT TTTGTGTGTAGGGATTTGCCGTTTAGTAGGGAGGTTGGTGGGGAGGGGGAGATGATCAGGGTTCCTGAAGGGCAT GTCTATCTTGCTGGGGATAATTTGCCGTGGTCGAGGGATTCCAGGAATTATGGCCCTATACCGATGGCGCTTATA AATGGGAAGATTATCGCGCGGGTGTGGCCGTTGCATAAGTTTGAGTGGGTGAAGAATACGTTGGAGACGGCGGAT TTGTCGGAGTGA |
| Gene | >Ani_SJS72_1|g4829.t1 ATGGACCGCTTCCTCCGCTACACCCTAAAACGCAGCACCCCGGGCCATCTATTCCGCTTCGGCCTCAACAGCCTG GGAGTGTTCTGCGCATGCACACTAATCTGGGAACACCTGATCACTGTCCAACTGAGCGAAGGTCCATCGATGTAC CCGACTTTCAGTCCGCGAGGCGACTACCTTCTCATATCGCGAGTGCACAAGCACGGCCGGGGGATTCAGGTTGGC GACGTGGTGCGGTTCTATCATCCGACGTTTTTGGGGGTGAATGGGGCGAAGAGGGTCATTGGGTTGCCGGGGGAT TTTGTGTGTAGGGATTTGCCGTTTAGTAGGGAGGTTGGTGGGGAGGGGGAGATGATCAGGGTATGTTAATCTTCC TTTTTATTGCTTTCGATTTGAGGGTTGGGGTTGGGGTTAAGCTAATGTGGTTTTTGTTTGGTTGCAGGTTCCTGA AGGGCATGTCTATCTTGCTGGGGATAATTTGCCGTGGTCGAGGGATTCCAGGAATTATGGCCCTATACCGATGGC GCTTATAAATGGGAAGATTATCGCGCGGGTGTGGCCGTTGCATAAGTTTGAGTGGGTGAAGAATACGTTGGAGAC GGCGGATTTGTCGGAGTGA |