Protein ID | Ani_SJS72_1|g4767.t1 |
Gene name | |
Location | scaffold_030:299978..300677 |
Strand | + |
Gene length (bp) | 699 |
Transcript length (bp) | 546 |
Coding sequence length (bp) | 546 |
Protein length (aa) | 182 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF02466 | Tim17 | Tim17/Tim22/Tim23/Pmp24 family | 1.1E-41 | 45 | 167 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 11 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 50 | 72 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS72_1|g4767.t1 MNPASMTTPMGGLGGAPGAAGPNMQGMSEQEQAMVKMMYSAMESCPMKTVMAGTMGFGLGGVFGLFMASMSYDST FTPQGKAIADLPWKEQVRRGFKDMGQRSWSSAKNFGIVGALYSGTECCIEGLRAKNDLTNSVAAGCITGGILGAK AGPQAAAAGCAGFAAFSAAIDAYMRMPEKDD* |
Coding | >Ani_SJS72_1|g4767.t1 ATGAACCCCGCTAGCATGACCACGCCGATGGGCGGCCTCGGCGGCGCCCCCGGCGCAGCAGGACCCAACATGCAG GGCATGAGCGAGCAAGAACAAGCCATGGTGAAGATGATGTACTCCGCCATGGAATCCTGCCCCATGAAGACCGTC ATGGCCGGAACAATGGGTTTCGGTCTGGGTGGTGTCTTCGGTTTGTTTATGGCTAGCATGTCCTACGACTCCACC TTCACCCCCCAAGGCAAAGCGATCGCCGACCTCCCCTGGAAAGAGCAAGTACGTCGCGGCTTCAAAGACATGGGC CAGCGGTCGTGGTCCAGCGCCAAGAACTTCGGTATCGTGGGTGCGCTGTACTCTGGCACGGAGTGCTGTATTGAG GGACTGAGGGCCAAGAATGATCTGACGAATTCGGTGGCCGCGGGTTGCATTACTGGTGGTATTTTGGGTGCGAAG GCCGGCCCCCAGGCTGCTGCTGCCGGGTGTGCGGGCTTTGCGGCGTTTAGTGCGGCTATTGATGCTTATATGAGG ATGCCGGAGAAGGATGATTAG |
Transcript | >Ani_SJS72_1|g4767.t1 ATGAACCCCGCTAGCATGACCACGCCGATGGGCGGCCTCGGCGGCGCCCCCGGCGCAGCAGGACCCAACATGCAG GGCATGAGCGAGCAAGAACAAGCCATGGTGAAGATGATGTACTCCGCCATGGAATCCTGCCCCATGAAGACCGTC ATGGCCGGAACAATGGGTTTCGGTCTGGGTGGTGTCTTCGGTTTGTTTATGGCTAGCATGTCCTACGACTCCACC TTCACCCCCCAAGGCAAAGCGATCGCCGACCTCCCCTGGAAAGAGCAAGTACGTCGCGGCTTCAAAGACATGGGC CAGCGGTCGTGGTCCAGCGCCAAGAACTTCGGTATCGTGGGTGCGCTGTACTCTGGCACGGAGTGCTGTATTGAG GGACTGAGGGCCAAGAATGATCTGACGAATTCGGTGGCCGCGGGTTGCATTACTGGTGGTATTTTGGGTGCGAAG GCCGGCCCCCAGGCTGCTGCTGCCGGGTGTGCGGGCTTTGCGGCGTTTAGTGCGGCTATTGATGCTTATATGAGG ATGCCGGAGAAGGATGATTAG |
Gene | >Ani_SJS72_1|g4767.t1 ATGAACCCCGCTAGCATGACCACGCCGATGGGCGGCCTCGGCGGCGCCCCCGGCGCAGCAGGACCCAACATGCAG GGCATGAGCGAGCAAGAACAAGCCATGGTGAAGATGGTACATACATACCCATCCCCTATACACTCTTCCTCTCAC ACCCAAAGAATCAAGCTAACACACCGATCAAAACAATAGATGTACTCCGCCATGGAATCCTGCCCCATGAAGACC GTCATGGCCGGAACAATGGGTTTCGGTCTGGGTGGTGTCTTCGGTTTGTTTATGGCTAGCGTATGCCTCCCCCCC CTCTTCCCAAATACCCTCCTTAAACTCAATACTGATATCCGAGTCTTGGTATATATATAGATGTCCTACGACTCC ACCTTCACCCCCCAAGGCAAAGCGATCGCCGACCTCCCCTGGAAAGAGCAAGTACGTCGCGGCTTCAAAGACATG GGCCAGCGGTCGTGGTCCAGCGCCAAGAACTTCGGTATCGTGGGTGCGCTGTACTCTGGCACGGAGTGCTGTATT GAGGGACTGAGGGCCAAGAATGATCTGACGAATTCGGTGGCCGCGGGTTGCATTACTGGTGGTATTTTGGGTGCG AAGGCCGGCCCCCAGGCTGCTGCTGCCGGGTGTGCGGGCTTTGCGGCGTTTAGTGCGGCTATTGATGCTTATATG AGGATGCCGGAGAAGGATGATTAG |