Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS72_1|g4767.t1
Gene name
Locationscaffold_030:299978..300677
Strand+
Gene length (bp)699
Transcript length (bp)546
Coding sequence length (bp)546
Protein length (aa) 182

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF02466 Tim17 Tim17/Tim22/Tim23/Pmp24 family 1.1E-41 45 167

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.5

Transmembrane Domains

Domain # Start End Length
1 50 72 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS72_1|g4767.t1
MNPASMTTPMGGLGGAPGAAGPNMQGMSEQEQAMVKMMYSAMESCPMKTVMAGTMGFGLGGVFGLFMASMSYDST
FTPQGKAIADLPWKEQVRRGFKDMGQRSWSSAKNFGIVGALYSGTECCIEGLRAKNDLTNSVAAGCITGGILGAK
AGPQAAAAGCAGFAAFSAAIDAYMRMPEKDD*
Coding >Ani_SJS72_1|g4767.t1
ATGAACCCCGCTAGCATGACCACGCCGATGGGCGGCCTCGGCGGCGCCCCCGGCGCAGCAGGACCCAACATGCAG
GGCATGAGCGAGCAAGAACAAGCCATGGTGAAGATGATGTACTCCGCCATGGAATCCTGCCCCATGAAGACCGTC
ATGGCCGGAACAATGGGTTTCGGTCTGGGTGGTGTCTTCGGTTTGTTTATGGCTAGCATGTCCTACGACTCCACC
TTCACCCCCCAAGGCAAAGCGATCGCCGACCTCCCCTGGAAAGAGCAAGTACGTCGCGGCTTCAAAGACATGGGC
CAGCGGTCGTGGTCCAGCGCCAAGAACTTCGGTATCGTGGGTGCGCTGTACTCTGGCACGGAGTGCTGTATTGAG
GGACTGAGGGCCAAGAATGATCTGACGAATTCGGTGGCCGCGGGTTGCATTACTGGTGGTATTTTGGGTGCGAAG
GCCGGCCCCCAGGCTGCTGCTGCCGGGTGTGCGGGCTTTGCGGCGTTTAGTGCGGCTATTGATGCTTATATGAGG
ATGCCGGAGAAGGATGATTAG
Transcript >Ani_SJS72_1|g4767.t1
ATGAACCCCGCTAGCATGACCACGCCGATGGGCGGCCTCGGCGGCGCCCCCGGCGCAGCAGGACCCAACATGCAG
GGCATGAGCGAGCAAGAACAAGCCATGGTGAAGATGATGTACTCCGCCATGGAATCCTGCCCCATGAAGACCGTC
ATGGCCGGAACAATGGGTTTCGGTCTGGGTGGTGTCTTCGGTTTGTTTATGGCTAGCATGTCCTACGACTCCACC
TTCACCCCCCAAGGCAAAGCGATCGCCGACCTCCCCTGGAAAGAGCAAGTACGTCGCGGCTTCAAAGACATGGGC
CAGCGGTCGTGGTCCAGCGCCAAGAACTTCGGTATCGTGGGTGCGCTGTACTCTGGCACGGAGTGCTGTATTGAG
GGACTGAGGGCCAAGAATGATCTGACGAATTCGGTGGCCGCGGGTTGCATTACTGGTGGTATTTTGGGTGCGAAG
GCCGGCCCCCAGGCTGCTGCTGCCGGGTGTGCGGGCTTTGCGGCGTTTAGTGCGGCTATTGATGCTTATATGAGG
ATGCCGGAGAAGGATGATTAG
Gene >Ani_SJS72_1|g4767.t1
ATGAACCCCGCTAGCATGACCACGCCGATGGGCGGCCTCGGCGGCGCCCCCGGCGCAGCAGGACCCAACATGCAG
GGCATGAGCGAGCAAGAACAAGCCATGGTGAAGATGGTACATACATACCCATCCCCTATACACTCTTCCTCTCAC
ACCCAAAGAATCAAGCTAACACACCGATCAAAACAATAGATGTACTCCGCCATGGAATCCTGCCCCATGAAGACC
GTCATGGCCGGAACAATGGGTTTCGGTCTGGGTGGTGTCTTCGGTTTGTTTATGGCTAGCGTATGCCTCCCCCCC
CTCTTCCCAAATACCCTCCTTAAACTCAATACTGATATCCGAGTCTTGGTATATATATAGATGTCCTACGACTCC
ACCTTCACCCCCCAAGGCAAAGCGATCGCCGACCTCCCCTGGAAAGAGCAAGTACGTCGCGGCTTCAAAGACATG
GGCCAGCGGTCGTGGTCCAGCGCCAAGAACTTCGGTATCGTGGGTGCGCTGTACTCTGGCACGGAGTGCTGTATT
GAGGGACTGAGGGCCAAGAATGATCTGACGAATTCGGTGGCCGCGGGTTGCATTACTGGTGGTATTTTGGGTGCG
AAGGCCGGCCCCCAGGCTGCTGCTGCCGGGTGTGCGGGCTTTGCGGCGTTTAGTGCGGCTATTGATGCTTATATG
AGGATGCCGGAGAAGGATGATTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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