Fungal Genomics

General Properties

Protein ID	Ani_SJS72_1|g4742.t1
Gene name
Location	scaffold_030:226653..228286
Strand	-
Gene length (bp)	1633
Transcript length (bp)	1518
Coding sequence length (bp)	1518
Protein length (aa)	506

Overview

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PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF11931	SF3a60_Prp9_C	SF3a60/Prp9 C-terminal	4.0E-54	385	505
PF16837	SF3A3	Pre-mRNA-splicing factor SF3A3, of SF3a complex, Prp9	3.2E-16	126	170
PF12108	SF3a60_bindingd	Splicing factor SF3a60 binding domain	3.3E-15	72	98
PF12874	zf-met	Zinc-finger of C2H2 type	1.3E-06	253	276
PF12171	zf-C2H2_jaz	Zinc-finger double-stranded RNA-binding	1.0E-07	253	276

GO

GO Term	Description	Terminal node
GO:0003723	RNA binding	Yes
GO:0000398	mRNA splicing, via spliceosome	Yes
GO:0005681	spliceosomal complex	Yes
GO:0005488	binding	No
GO:0071704	organic substance metabolic process	No
GO:0003676	nucleic acid binding	No
GO:0000377	RNA splicing, via transesterification reactions with bulged adenosine as nucleophile	No
GO:0003674	molecular_function	No
GO:1901360	organic cyclic compound metabolic process	No
GO:1990904	ribonucleoprotein complex	No
GO:0046483	heterocycle metabolic process	No
GO:0000375	RNA splicing, via transesterification reactions	No
GO:0034641	cellular nitrogen compound metabolic process	No
GO:0008152	metabolic process	No
GO:0006725	cellular aromatic compound metabolic process	No
GO:0097159	organic cyclic compound binding	No
GO:0008150	biological_process	No
GO:0016071	mRNA metabolic process	No
GO:0008380	RNA splicing	No
GO:0006397	mRNA processing	No
GO:0032991	protein-containing complex	No
GO:0016070	RNA metabolic process	No
GO:0090304	nucleic acid metabolic process	No
GO:0044238	primary metabolic process	No
GO:0006396	RNA processing	No
GO:0006139	nucleobase-containing compound metabolic process	No
GO:0043170	macromolecule metabolic process	No
GO:1901363	heterocyclic compound binding	No
GO:0006807	nitrogen compound metabolic process	No
GO:0044237	cellular metabolic process	No
GO:0005575	cellular_component	No
GO:0140513	nuclear protein-containing complex	No
GO:0009987	cellular process	No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID	3
Orthogroup	1577
Change Orthofinder run	3: Aspergillus niger - all strains

Species	Protein ID
Aspergillus niger CBS 112.32	Ani_SJS6_1|g1287.t1
Aspergillus niger CBS 113.50	Ani_SJS3_1|g9265.t1
Aspergillus niger CBS 115988	Ani_SJS16_1|g2322.t1
Aspergillus niger CBS 115989	Ani_SJS83_1|g9176.t1
Aspergillus niger CBS 118.52	Ani_SJS14_1|g8527.t1
Aspergillus niger CBS 124.48	Ani_SJS7_1|g2211.t1
Aspergillus niger CBS 131.52	Ani_SJS8_1|g4084.t1
Aspergillus niger CBS 133816	Ani_SJS71_1|g2777.t1
Aspergillus niger CBS 147320	Ani_SJS28_1|g2141.t1
Aspergillus niger CBS 147321	Ani_SJS30_1|g290.t1
Aspergillus niger CBS 147322	Ani_SJS35_1|g7449.t1
Aspergillus niger CBS 147323	Ani_SJS38_1|g6663.t1
Aspergillus niger CBS 147324	Ani_SJS39_1|g88.t1
Aspergillus niger CBS 147343	Ani_SJS115_1|g920.t1
Aspergillus niger CBS 147344	Ani_SJS70_1|g3701.t1
Aspergillus niger CBS 147345	Ani_SJS72_1|g4742.t1 (this protein)
Aspergillus niger CBS 147346	Ani_SJS75_1|g7544.t1
Aspergillus niger CBS 147347	Ani_SJS76_1|g4779.t1
Aspergillus niger CBS 147352	Ani_SJS95_1|g5364.t1
Aspergillus niger CBS 147353	Ani_SJS100_1|g1276.t1
Aspergillus niger CBS 147371	Ani_SJS27_1|g25.t1
Aspergillus niger CBS 147482	Ani_SJS55_1|g8033.t1
Aspergillus niger CBS 630.78	Ani_SJS18_1|g8516.t1
Aspergillus niger CBS 769.97	Ani_SJS82_1|g349.t1

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus Download genbank file of locus (reverse complement) The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ani_SJS72_1|g4742.t1 MIFEEQRFIHEDLERLEQAIADRVAEEPRNIRDRLARDHEVAHFLKRIEDQSKRLLDIYKDADGAREKEIQTIST GDQFEEFYKQLDEIKDFHKRYPNEPVENLERAYKRRQPGEGEVTGMEIDNLFTGEEGYGQFLDLTTLHEDYLNLP GVKRLSYVQYLDIFDAFTPPQLPIKRNNKLSDRYFKYVGELANYLESFIKKVKPLQDLDKLFASFDEEFEKQWTA NQVPGWTEEVAENGNQGPKTEGSGEGIWCADCEREFKNENVYKNHLTGKKHIRAAEARKAAGDTGAKPAAPATNG ASSVAHRLKERAVAEREHRVRSLTQVLQPERVATRMNVERRQGMTERERQMELEALLNESENPGGDRAGDQSDED DEDRIYNPLKLPLAWDGKPIPYWLYKLHGLGVEYPCEICGNFVYMGRRAFDKHFSEALHIFGLKCLGITSNTNLF REITRIEDAIRLWEKLEQDRKKDRDNRDNVVQMEDAEGNVMPERIYLDLQKQGIL*
Coding	>Ani_SJS72_1|g4742.t1 ATGATTTTCGAGGAGCAACGGTTTATCCACGAGGACCTTGAGCGCCTAGAGCAGGCGATTGCCGACCGCGTTGCC GAAGAGCCTCGTAATATTCGGGATCGCTTGGCTCGCGATCATGAAGTCGCACATTTCTTAAAGCGTATAGAAGAC CAGTCCAAGAGGTTGCTCGACATCTACAAGGATGCAGACGGCGCGCGTGAGAAGGAAATCCAAACCATCTCAACC GGCGATCAATTCGAGGAGTTCTACAAGCAACTGGATGAGATCAAGGACTTCCATAAGCGCTACCCTAATGAGCCA GTGGAAAACCTTGAACGGGCATATAAGCGTCGTCAGCCCGGAGAGGGTGAAGTAACGGGCATGGAGATCGACAAT CTATTCACCGGTGAAGAGGGTTATGGACAGTTTCTGGACCTCACAACACTGCACGAAGACTACCTCAATTTGCCT GGGGTCAAACGGCTCTCATATGTACAATACCTCGACATATTCGATGCGTTTACTCCTCCGCAACTTCCGATTAAG CGAAACAACAAACTTTCCGATCGGTATTTCAAGTATGTCGGCGAACTTGCAAACTACTTGGAAAGCTTCATCAAG AAAGTGAAGCCGTTACAAGATCTGGACAAACTTTTTGCTAGCTTTGATGAGGAGTTCGAGAAGCAATGGACGGCG AATCAGGTACCTGGTTGGACGGAGGAGGTTGCTGAAAATGGTAACCAAGGTCCGAAGACCGAGGGCTCCGGAGAA GGCATCTGGTGTGCTGACTGCGAGAGGGAGTTCAAGAATGAGAATGTCTATAAGAATCACTTGACAGGCAAAAAG CACATTCGGGCCGCTGAAGCTCGCAAAGCTGCCGGGGATACTGGCGCGAAACCGGCAGCCCCTGCGACGAACGGC GCATCATCCGTGGCTCATCGTCTTAAGGAACGTGCAGTCGCAGAGAGGGAACATCGGGTGCGTTCTCTGACGCAG GTACTGCAGCCCGAGCGTGTAGCGACGAGGATGAACGTGGAGCGGAGACAGGGTATGACTGAACGGGAGCGCCAG ATGGAACTTGAAGCTCTGCTTAATGAGTCTGAGAACCCTGGCGGTGATCGTGCTGGCGATCAATCTGACGAGGAC GACGAAGACCGAATCTACAATCCCCTCAAACTGCCACTTGCTTGGGACGGCAAGCCAATTCCCTACTGGCTTTAC AAGCTGCATGGCCTGGGGGTGGAGTATCCTTGCGAGATCTGCGGTAACTTTGTGTATATGGGCCGTCGAGCTTTT GACAAGCATTTCTCAGAGGCCCTACATATCTTTGGTTTGAAGTGTCTTGGTATCACTTCTAATACCAACCTTTTC CGTGAAATCACTCGGATTGAGGATGCAATCAGGCTTTGGGAGAAATTAGAGCAGGACCGCAAGAAGGATAGAGAT AATCGCGACAATGTGGTACAGATGGAGGACGCCGAAGGCAATGTGATGCCGGAGAGGATCTACCTTGATCTGCAA AAGCAAGGTATACTGTAA
Transcript	>Ani_SJS72_1|g4742.t1 ATGATTTTCGAGGAGCAACGGTTTATCCACGAGGACCTTGAGCGCCTAGAGCAGGCGATTGCCGACCGCGTTGCC GAAGAGCCTCGTAATATTCGGGATCGCTTGGCTCGCGATCATGAAGTCGCACATTTCTTAAAGCGTATAGAAGAC CAGTCCAAGAGGTTGCTCGACATCTACAAGGATGCAGACGGCGCGCGTGAGAAGGAAATCCAAACCATCTCAACC GGCGATCAATTCGAGGAGTTCTACAAGCAACTGGATGAGATCAAGGACTTCCATAAGCGCTACCCTAATGAGCCA GTGGAAAACCTTGAACGGGCATATAAGCGTCGTCAGCCCGGAGAGGGTGAAGTAACGGGCATGGAGATCGACAAT CTATTCACCGGTGAAGAGGGTTATGGACAGTTTCTGGACCTCACAACACTGCACGAAGACTACCTCAATTTGCCT GGGGTCAAACGGCTCTCATATGTACAATACCTCGACATATTCGATGCGTTTACTCCTCCGCAACTTCCGATTAAG CGAAACAACAAACTTTCCGATCGGTATTTCAAGTATGTCGGCGAACTTGCAAACTACTTGGAAAGCTTCATCAAG AAAGTGAAGCCGTTACAAGATCTGGACAAACTTTTTGCTAGCTTTGATGAGGAGTTCGAGAAGCAATGGACGGCG AATCAGGTACCTGGTTGGACGGAGGAGGTTGCTGAAAATGGTAACCAAGGTCCGAAGACCGAGGGCTCCGGAGAA GGCATCTGGTGTGCTGACTGCGAGAGGGAGTTCAAGAATGAGAATGTCTATAAGAATCACTTGACAGGCAAAAAG CACATTCGGGCCGCTGAAGCTCGCAAAGCTGCCGGGGATACTGGCGCGAAACCGGCAGCCCCTGCGACGAACGGC GCATCATCCGTGGCTCATCGTCTTAAGGAACGTGCAGTCGCAGAGAGGGAACATCGGGTGCGTTCTCTGACGCAG GTACTGCAGCCCGAGCGTGTAGCGACGAGGATGAACGTGGAGCGGAGACAGGGTATGACTGAACGGGAGCGCCAG ATGGAACTTGAAGCTCTGCTTAATGAGTCTGAGAACCCTGGCGGTGATCGTGCTGGCGATCAATCTGACGAGGAC GACGAAGACCGAATCTACAATCCCCTCAAACTGCCACTTGCTTGGGACGGCAAGCCAATTCCCTACTGGCTTTAC AAGCTGCATGGCCTGGGGGTGGAGTATCCTTGCGAGATCTGCGGTAACTTTGTGTATATGGGCCGTCGAGCTTTT GACAAGCATTTCTCAGAGGCCCTACATATCTTTGGTTTGAAGTGTCTTGGTATCACTTCTAATACCAACCTTTTC CGTGAAATCACTCGGATTGAGGATGCAATCAGGCTTTGGGAGAAATTAGAGCAGGACCGCAAGAAGGATAGAGAT AATCGCGACAATGTGGTACAGATGGAGGACGCCGAAGGCAATGTGATGCCGGAGAGGATCTACCTTGATCTGCAA AAGCAAGGTATACTGTAA
Gene	>Ani_SJS72_1|g4742.t1 ATGATTTTCGAGGAGCAACGGTTTATCCACGAGGACCTTGAGCGCCTAGAGCAGGCGATTGCCGACCGCGTTGCC GAAGAGCCTCGTAATGTAAGTAACTCTGCAGTCTCTATCTCGTCGCTCTCTGCTAACTCACTCCTTTACTTTCAG ATTCGGGATCGCTTGGCTCGCGATCATGAAGTCGCACATTTCTTAAAGCGTATAGAAGACCAGTCCAAGAGGTTG CTCGACATCTACAAGGATGCAGACGGCGCGCGTGAGAAGGAAATCCAAACCATCTCAACCGGCGATCAATTCGAG GAGTTCTACAAGCAACTGGATGAGATCAAGGACTTCCATAAGCGCTACCCTAATGAGCCAGTGGAAAACCTTGAA CGGGCATATAAGCGTCGTCAGCCCGGAGAGGGTGAAGTAACGGGCATGGAGATCGACAATCTATTCACCGGTGAA GAGGGTTATGGACAGTTTCTGGACCTCACAACACTGCACGAAGACTACCTCAATTTGCCTGGGGTCAAACGGCTC TCATATGTACAATACCTCGACATATTCGATGCGTTTACTCCTCCGCAACTTCCGATTAAGCGAAACAACAAACTT TCCGATCGGTATTTCAAGTATGTCGGCGAACTTGCAAACTACTTGGAAAGCTTCATCAAGAAAGTGAAGCCGTTA CAAGATCTGGACAAACTTTTTGCTAGCTTTGATGAGGAGTTCGAGAAGCAATGGACGGCGAATCAGGTACCTGGT TGGACGGAGGAGGTTGCTGAAAATGGTAACCAAGGTCCGAAGACCGAGGGCTCCGGAGAAGGCATCTGGTGTGCT GACTGCGAGAGGGAGTTCAAGAATGAGAATGTCTATAAGAATCACTTGACAGGCAAAAAGCACATTCGGGCCGCT GAAGCTCGCAAAGCTGCCGGGGATACTGGCGCGAAACCGGCAGCCCCTGCGACGAACGGCGCATCATCCGTGGCT CATCGTCTTAAGGAACGTGCAGTCGCAGAGAGGGAACATCGGGTGCGTTCTCTGACGCAGGTACTGCAGCCCGAG CGTGTAGCGACGAGGATGAACGTGGAGCGGAGACAGGGTATGACTGAACGGGAGCGCCAGATGGAACTTGAAGCT CTGCTTAATGAGTCTGAGAACCCTGGCGGTGATCGTGCTGGCGATCAATCTGACGAGGACGACGAAGACCGAATC TACAATCCCCTCAAACTGCCACTTGCTTGGGACGGCAAGCCAATTCCCTACTGGCTTTACAAGCTGCATGGCCTG GGGGTGGAGTATCCTTGCGAGATCTGCGGTAACTTTGTGTATATGGGCCGTCGAGCTTTTGACAAGCATTTCTCA GAGGCCCTACATATCTTTGGTTTGAAGTGTCTTGGTATCACTTCTAATACCAACCTTTTCCGTGAAATCACTCGG ATTGAGGATGCAATCAGGCTTTGGGAGAAATTAGAGCAGGACCGCAAGAAGGATAGAGATAATCGCGACAATGTG GTACAGATGGAGGACGCCGAAGGCAATGTGATGCCGGAGAGGATCTACCTTGAGTACGTGCCCCCAACAGTTCCG CGGCCTAATGGAACCTTTACTAATGTTTACCAGTCTGCAAAAGCAAGGTATACTGTAA