© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g4740.t1 |
| Gene name | |
| Location | scaffold_030:220458..222670 |
| Strand | + |
| Gene length (bp) | 2212 |
| Transcript length (bp) | 2046 |
| Coding sequence length (bp) | 2046 |
| Protein length (aa) | 682 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF04049 | ANAPC8 | Anaphase promoting complex subunit 8 / Cdc23 | 3.1E-53 | 12 | 199 |
| PF13181 | TPR_8 | Tetratricopeptide repeat | 1.1E-02 | 390 | 421 |
| PF13181 | TPR_8 | Tetratricopeptide repeat | 1.8E-05 | 424 | 456 |
| PF13181 | TPR_8 | Tetratricopeptide repeat | 7.6E-03 | 492 | 518 |
| PF13181 | TPR_8 | Tetratricopeptide repeat | 9.5E-02 | 543 | 566 |
| PF13414 | TPR_11 | TPR repeat | 1.2E-06 | 430 | 468 |
| PF13432 | TPR_16 | Tetratricopeptide repeat | 2.2E-05 | 429 | 469 |
| PF13176 | TPR_7 | Tetratricopeptide repeat | 4.9E-03 | 544 | 568 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0005515 | protein binding | Yes |
| GO:0030071 | regulation of mitotic metaphase/anaphase transition | Yes |
| GO:0005680 | anaphase-promoting complex | Yes |
| GO:0050794 | regulation of cellular process | No |
| GO:0051726 | regulation of cell cycle | No |
| GO:0000151 | ubiquitin ligase complex | No |
| GO:0003674 | molecular_function | No |
| GO:1901987 | regulation of cell cycle phase transition | No |
| GO:1902099 | regulation of metaphase/anaphase transition of cell cycle | No |
| GO:0008150 | biological_process | No |
| GO:0005488 | binding | No |
| GO:0010564 | regulation of cell cycle process | No |
| GO:0033045 | regulation of sister chromatid segregation | No |
| GO:0033043 | regulation of organelle organization | No |
| GO:0065007 | biological regulation | No |
| GO:1901990 | regulation of mitotic cell cycle phase transition | No |
| GO:0140513 | nuclear protein-containing complex | No |
| GO:0050789 | regulation of biological process | No |
| GO:0007346 | regulation of mitotic cell cycle | No |
| GO:0031461 | cullin-RING ubiquitin ligase complex | No |
| GO:0010965 | regulation of mitotic sister chromatid separation | No |
| GO:1990234 | transferase complex | No |
| GO:1902494 | catalytic complex | No |
| GO:0051983 | regulation of chromosome segregation | No |
| GO:0000152 | nuclear ubiquitin ligase complex | No |
| GO:0140535 | intracellular protein-containing complex | No |
| GO:0032991 | protein-containing complex | No |
| GO:1905818 | regulation of chromosome separation | No |
| GO:0033044 | regulation of chromosome organization | No |
| GO:0051128 | regulation of cellular component organization | No |
| GO:0005575 | cellular_component | No |
| Orthofinder run ID | 3 |
| Orthogroup | 1575 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g4740.t1 MAAQFTDENIKELRFRLENAAIKCSERCLYQSAKWAAEMLDSIVPIEQYDTDPDSPMDYPDAPSNPQNPYLRTQD PLEAALEAQESYKYLLAKSYFDTREYDRCASVFLPPTISPVPLTSTPPNPKSRQSLTPQKGKSKASAYSGVKDNS VTRNPYPKLSQKSLFLALYAKYLAGEKRKDEETEMVLGPADGGSTVNKELPDLARGLEGWFTERQDKGLEERSQG WLEYLYGVILLKGRNEDEAKKWLIRSVHLNPFHWGAWQELNDLLASTEDLNQVVNLLPLNIMTLIFRVYCSQELY QATEDTYQSLSELETIFPTSAFLKTQRALLYYHSKDFEEASSIFTDILVSSPHRLDSLDHYSNILYVMGARPQLA FVAQIATATDKFRPETCCVVGNYYSLKSEHEKAVMYFRRALTLDRNFLSAWTLMGHEYIEMKNTHAAIESYRRAV DVNRKDYRAWYGLGQAYEVLDMSFYALFYYQRAAALRPYDPKMWQAVGSCYAKMGRIEQSIKALKRALVAGSYYA DDSSQVGGGPERKILDPETLHQIATLYERLGDDEEAASYMELTLQQESGQVIQEDEDISSDNDDDDNQSGTEGQS SSRRTRKSSTQQNEDEDDTWHGTGVTATTSKARLWLARWSLRNGDLERADQLAGELCQDGVEVEEAKALMRDVRA RREGDE* |
| Coding | >Ani_SJS72_1|g4740.t1 ATGGCTGCTCAATTCACAGACGAGAATATCAAAGAGCTCAGGTTCCGGCTTGAAAATGCGGCGATCAAATGCTCC GAGCGTTGTTTATACCAATCCGCCAAATGGGCAGCTGAAATGCTAGATTCAATCGTACCAATTGAGCAATACGAC ACCGATCCAGACTCCCCCATGGACTACCCCGACGCTCCTTCGAACCCCCAGAACCCTTACCTCCGAACACAAGAT CCGCTCGAGGCCGCTCTCGAAGCGCAAGAGTCATACAAGTACCTCCTCGCGAAATCTTACTTTGACACCCGCGAA TATGATCGCTGCGCATCAGTCTTCCTCCCTCCGACCATCTCCCCTGTTCCCCTTACTTCAACGCCGCCGAATCCG AAGTCTAGACAGTCGTTGACTCCGCAGAAAGGGAAATCGAAGGCCTCAGCATATAGTGGTGTCAAAGATAATAGT GTAACCAGGAATCCATACCCAAAGCTTAGTCAGAAATCGCTGTTTCTCGCGTTGTATGCTAAGTATCTGGCGGGC GAGAAGCGCAAGGATGAAGAGACCGAAATGGTGTTGGGACCAGCAGACGGAGGTTCGACTGTCAACAAAGAATTA CCAGATTTGGCGCGAGGATTAGAAGGATGGTTTACTGAGCGGCAAGACAAGGGACTGGAAGAGCGCAGCCAGGGA TGGTTGGAGTATCTGTATGGTGTTATACTTCTTAAGGGACGAAATGAAGACGAGGCCAAGAAGTGGCTTATCCGG AGTGTTCATCTGAACCCATTTCACTGGGGCGCCTGGCAAGAGCTGAACGACTTGCTTGCAAGCACAGAAGACTTG AACCAAGTGGTCAATCTTCTGCCCTTGAATATCATGACCCTCATATTCCGCGTATACTGCAGCCAGGAGCTGTAT CAGGCCACAGAGGATACCTACCAGTCACTATCTGAACTGGAAACAATCTTCCCCACGAGTGCTTTCCTCAAGACC CAAAGAGCATTGTTATACTACCACTCAAAAGACTTTGAAGAAGCCTCCAGTATCTTCACAGACATTCTCGTTTCA TCTCCCCACCGTCTCGACAGTCTCGACCACTACTCCAACATCCTATACGTGATGGGCGCGCGCCCGCAGCTCGCA TTTGTCGCCCAAATCGCGACCGCAACGGACAAATTCCGCCCCGAAACATGTTGTGTAGTAGGAAACTACTACTCG CTCAAATCCGAGCACGAAAAAGCCGTCATGTATTTCCGCCGTGCCTTGACCCTAGACCGAAACTTTCTCTCAGCC TGGACCCTCATGGGCCACGAATACATCGAAATGAAAAACACCCACGCCGCAATCGAATCCTACCGTCGGGCAGTC GACGTCAACCGCAAAGACTACCGCGCCTGGTACGGTCTAGGCCAAGCCTACGAAGTACTCGACATGTCCTTCTAC GCCCTATTCTACTACCAACGAGCCGCAGCGCTACGCCCCTACGACCCCAAAATGTGGCAAGCCGTAGGATCCTGC TACGCCAAAATGGGCCGCATCGAACAGAGCATCAAAGCGCTCAAACGAGCCCTGGTCGCTGGCTCCTACTACGCC GATGACTCCTCCCAAGTAGGAGGAGGACCAGAGCGGAAGATACTCGACCCCGAAACCCTCCACCAGATCGCCACG CTGTACGAACGTCTTGGCGATGACGAAGAAGCGGCCTCGTACATGGAGCTCACGCTTCAGCAAGAGTCAGGCCAA GTGATCCAGGAAGACGAAGACATCTCATCTGATAATGATGACGACGACAACCAATCTGGGACGGAGGGACAGTCT AGCTCGAGACGAACGCGCAAGTCGTCGACTCAGCAGAATGAGGATGAGGATGATACTTGGCATGGAACGGGCGTC ACAGCTACTACTTCCAAGGCTAGGTTGTGGCTTGCGCGGTGGTCTCTGCGTAATGGGGACCTTGAGCGTGCAGAT CAGCTGGCTGGTGAGTTGTGTCAAGATGGGGTTGAGGTTGAAGAGGCGAAGGCTTTGATGAGGGATGTTCGCGCG CGGAGAGAAGGGGATGAGTGA |
| Transcript | >Ani_SJS72_1|g4740.t1 ATGGCTGCTCAATTCACAGACGAGAATATCAAAGAGCTCAGGTTCCGGCTTGAAAATGCGGCGATCAAATGCTCC GAGCGTTGTTTATACCAATCCGCCAAATGGGCAGCTGAAATGCTAGATTCAATCGTACCAATTGAGCAATACGAC ACCGATCCAGACTCCCCCATGGACTACCCCGACGCTCCTTCGAACCCCCAGAACCCTTACCTCCGAACACAAGAT CCGCTCGAGGCCGCTCTCGAAGCGCAAGAGTCATACAAGTACCTCCTCGCGAAATCTTACTTTGACACCCGCGAA TATGATCGCTGCGCATCAGTCTTCCTCCCTCCGACCATCTCCCCTGTTCCCCTTACTTCAACGCCGCCGAATCCG AAGTCTAGACAGTCGTTGACTCCGCAGAAAGGGAAATCGAAGGCCTCAGCATATAGTGGTGTCAAAGATAATAGT GTAACCAGGAATCCATACCCAAAGCTTAGTCAGAAATCGCTGTTTCTCGCGTTGTATGCTAAGTATCTGGCGGGC GAGAAGCGCAAGGATGAAGAGACCGAAATGGTGTTGGGACCAGCAGACGGAGGTTCGACTGTCAACAAAGAATTA CCAGATTTGGCGCGAGGATTAGAAGGATGGTTTACTGAGCGGCAAGACAAGGGACTGGAAGAGCGCAGCCAGGGA TGGTTGGAGTATCTGTATGGTGTTATACTTCTTAAGGGACGAAATGAAGACGAGGCCAAGAAGTGGCTTATCCGG AGTGTTCATCTGAACCCATTTCACTGGGGCGCCTGGCAAGAGCTGAACGACTTGCTTGCAAGCACAGAAGACTTG AACCAAGTGGTCAATCTTCTGCCCTTGAATATCATGACCCTCATATTCCGCGTATACTGCAGCCAGGAGCTGTAT CAGGCCACAGAGGATACCTACCAGTCACTATCTGAACTGGAAACAATCTTCCCCACGAGTGCTTTCCTCAAGACC CAAAGAGCATTGTTATACTACCACTCAAAAGACTTTGAAGAAGCCTCCAGTATCTTCACAGACATTCTCGTTTCA TCTCCCCACCGTCTCGACAGTCTCGACCACTACTCCAACATCCTATACGTGATGGGCGCGCGCCCGCAGCTCGCA TTTGTCGCCCAAATCGCGACCGCAACGGACAAATTCCGCCCCGAAACATGTTGTGTAGTAGGAAACTACTACTCG CTCAAATCCGAGCACGAAAAAGCCGTCATGTATTTCCGCCGTGCCTTGACCCTAGACCGAAACTTTCTCTCAGCC TGGACCCTCATGGGCCACGAATACATCGAAATGAAAAACACCCACGCCGCAATCGAATCCTACCGTCGGGCAGTC GACGTCAACCGCAAAGACTACCGCGCCTGGTACGGTCTAGGCCAAGCCTACGAAGTACTCGACATGTCCTTCTAC GCCCTATTCTACTACCAACGAGCCGCAGCGCTACGCCCCTACGACCCCAAAATGTGGCAAGCCGTAGGATCCTGC TACGCCAAAATGGGCCGCATCGAACAGAGCATCAAAGCGCTCAAACGAGCCCTGGTCGCTGGCTCCTACTACGCC GATGACTCCTCCCAAGTAGGAGGAGGACCAGAGCGGAAGATACTCGACCCCGAAACCCTCCACCAGATCGCCACG CTGTACGAACGTCTTGGCGATGACGAAGAAGCGGCCTCGTACATGGAGCTCACGCTTCAGCAAGAGTCAGGCCAA GTGATCCAGGAAGACGAAGACATCTCATCTGATAATGATGACGACGACAACCAATCTGGGACGGAGGGACAGTCT AGCTCGAGACGAACGCGCAAGTCGTCGACTCAGCAGAATGAGGATGAGGATGATACTTGGCATGGAACGGGCGTC ACAGCTACTACTTCCAAGGCTAGGTTGTGGCTTGCGCGGTGGTCTCTGCGTAATGGGGACCTTGAGCGTGCAGAT CAGCTGGCTGGTGAGTTGTGTCAAGATGGGGTTGAGGTTGAAGAGGCGAAGGCTTTGATGAGGGATGTTCGCGCG CGGAGAGAAGGGGATGAGTGA |
| Gene | >Ani_SJS72_1|g4740.t1 ATGGCTGCTCAATTCACAGACGAGAATATCAAAGAGCTCAGGTTCCGGCTTGAAAATGCGGCGATCAAATGCTCC GAGCGTTGTTTATACCAATCCGCCAAATGGTACCGTTACAGGCATCACCCCGGCTCACCTCCATGAGCAGTCACT AACCTTGTGGGTCAGGGCAGCTGAAATGCTAGATTCAATCGTACCAATTGAGCAATACGACACCGATCCAGACTC CCCCATGGACTACCCCGACGCTCCTTCGAACCCCCAGAACCCTTACCTCCGAACACAAGATCCGCTCGAGGCCGC TCTCGAAGCGCAAGAGTCATACAAGTACCTCCTCGCGAAATCTTACTTTGACACCCGCGAATATGATCGCTGCGC ATCAGTCTTCCTCCCTCCGACCATCTCCCCTGTTCCCCTTACTTCAACGCCGCCGAATCCGAAGTCTAGACAGTC GTTGACTCCGCAGAAAGGGAAATCGAAGGCCTCAGCATATAGTGGTGTCAAAGATAATAGTGTAACCAGGAATCC ATACCCAAAGCTTAGTCAGAAATCGCTGTTTCTCGCGTTGTATGCTAAGTATCTGGCGGGCGAGAAGCGCAAGGA TGAAGAGACCGAAATGGTGTTGGGACCAGCAGACGGAGGTTCGACTGTCAACAAAGAATTACCAGATTTGGCGCG AGGATTAGAAGGATGGTTTACTGAGCGGCAAGACAAGGGACTGGAAGAGCGCAGCCAGGGATGGTTGGAGTATCT GTATGGTGTTATACTTCTTAAGGGACGAAATGAAGACGAGGCCAAGAAGTGGCTTATCCGGAGTGTTCATCTGAA CCCATTTCACTGGGGCGCCTGGCAAGAGCTGAACGACTTGCTTGCAAGCACAGAAGACGTACGTCCCGTTAAATA TTCTCGCAGTCGCAGGTTGCTGATCGTTCTCGCAGTTGAACCAAGTGGTCAATCTTCTGCCCTTGAATATCATGA CCCTCATATTCCGCGTATACTGCAGCCAGGAGCTGTATCAGGCCACAGAGGATACCTACCAGTCACTATCTGAAC TGGAAACAATCTTCCCCACGAGTGCTTTCCTCAAGACCCAAAGAGCATTGTTATACTACCACTCAAAAGGTACGG CTGCACTACAAACACACATTGCATAGACAAGCTAACCTTTCCTATAGACTTTGAAGAAGCCTCCAGTATCTTCAC AGACATTCTCGTTTCATCTCCCCACCGTCTCGACAGTCTCGACCACTACTCCAACATCCTATACGTGATGGGCGC GCGCCCGCAGCTCGCATTTGTCGCCCAAATCGCGACCGCAACGGACAAATTCCGCCCCGAAACATGTTGTGTAGT AGGAAACTACTACTCGCTCAAATCCGAGCACGAAAAAGCCGTCATGTATTTCCGCCGTGCCTTGACCCTAGACCG AAACTTTCTCTCAGCCTGGACCCTCATGGGCCACGAATACATCGAAATGAAAAACACCCACGCCGCAATCGAATC CTACCGTCGGGCAGTCGACGTCAACCGCAAAGACTACCGCGCCTGGTACGGTCTAGGCCAAGCCTACGAAGTACT CGACATGTCCTTCTACGCCCTATTCTACTACCAACGAGCCGCAGCGCTACGCCCCTACGACCCCAAAATGTGGCA AGCCGTAGGATCCTGCTACGCCAAAATGGGCCGCATCGAACAGAGCATCAAAGCGCTCAAACGAGCCCTGGTCGC TGGCTCCTACTACGCCGATGACTCCTCCCAAGTAGGAGGAGGACCAGAGCGGAAGATACTCGACCCCGAAACCCT CCACCAGATCGCCACGCTGTACGAACGTCTTGGCGATGACGAAGAAGCGGCCTCGTACATGGAGCTCACGCTTCA GCAAGAGTCAGGCCAAGTGATCCAGGAAGACGAAGACATCTCATCTGATAATGATGACGACGACAACCAATCTGG GACGGAGGGACAGTCTAGCTCGAGACGAACGCGCAAGTCGTCGACTCAGCAGAATGAGGATGAGGATGATACTTG GCATGGAACGGGCGTCACAGCTACTACTTCCAAGGCTAGGTTGTGGCTTGCGCGGTGGTCTCTGCGTAATGGGGA CCTTGAGCGTGCAGATCAGCTGGCTGGTGAGTTGTGTCAAGATGGGGTTGAGGTTGAAGAGGCGAAGGCTTTGAT GAGGGATGTTCGCGCGCGGAGAGAAGGGGATGAGTGA |