Protein ID | Ani_SJS72_1|g4718.t1 |
Gene name | |
Location | scaffold_030:149217..150326 |
Strand | + |
Gene length (bp) | 1109 |
Transcript length (bp) | 993 |
Coding sequence length (bp) | 993 |
Protein length (aa) | 331 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF05721 | PhyH | Phytanoyl-CoA dioxygenase (PhyH) | 3.5E-16 | 60 | 266 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 21 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS72_1|g4718.t1 MSQILLKAPLRFSHQFQARALSTQLCKLASHPTSIRPSTTEIQNARLSPQNLEVAMRSLHQDGLVVVENVIPHDS LDRLNAKMTEDAYTLRNKKDGSPFNYNPGNIQQDAPPVRGYFDPQIFLNPIATQITSSALGPRPKWTFCSGNTAM PPTAEHPPMSQPVHSDADFAHPFHPFAYVINVPLITMTPENGSTEVWLGTHTDTGLHVQEGLHGERASGRIKLDE LEKRRIERPPCQPTVAKGSLVIRDLRLWHAGIGNQTETPRVMLAMIHFASWYRNPMKLEFADDLKPLIGSQADVE VPCNWVSKSEAMSRYLNRGFGNAYDFSQEP* |
Coding | >Ani_SJS72_1|g4718.t1 ATGAGTCAAATTCTTCTCAAGGCGCCGCTGCGCTTCAGCCACCAATTTCAAGCCCGAGCGTTATCAACTCAGCTA TGCAAGCTTGCTAGTCATCCCACCTCCATCCGCCCCTCCACCACCGAGATTCAAAATGCACGACTTTCGCCCCAA AATTTGGAGGTTGCCATGCGCAGCCTTCACCAGGATGGGCTGGTCGTGGTGGAGAATGTGATTCCTCATGATAGC CTGGATCGACTCAACGCAAAGATGACTGAGGATGCATACACACTTCGAAACAAAAAGGATGGTAGCCCGTTCAAC TACAACCCCGGAAATATCCAGCAGGATGCCCCGCCAGTGCGCGGATACTTCGACCCCCAGATCTTTCTAAACCCC ATTGCCACGCAGATCACTTCATCCGCATTGGGGCCCCGTCCGAAATGGACATTTTGTTCTGGCAACACCGCCATG CCACCCACCGCTGAGCACCCGCCCATGTCCCAGCCGGTTCACTCCGACGCCGACTTTGCGCATCCGTTCCATCCC TTCGCATATGTGATTAATGTGCCTCTCATCACAATGACCCCGGAGAACGGCTCCACCGAGGTGTGGCTCGGAACC CACACCGACACTGGACTCCATGTTCAAGAGGGGCTCCACGGTGAGCGCGCAAGTGGTCGAATCAAGCTCGATGAG CTCGAAAAGCGTCGGATAGAGCGGCCCCCTTGCCAGCCTACCGTTGCTAAGGGCTCTCTTGTTATCAGAGACCTA CGCCTGTGGCATGCCGGAATTGGCAACCAGACTGAGACTCCTCGCGTGATGCTGGCCATGATCCATTTTGCCTCG TGGTATCGTAACCCTATGAAGCTCGAGTTTGCCGATGACTTGAAGCCTCTCATTGGAAGTCAGGCTGACGTCGAA GTCCCATGCAACTGGGTGTCAAAGTCTGAGGCCATGTCGCGCTATTTGAACCGTGGTTTTGGCAATGCTTACGAC TTCAGCCAGGAGCCTTAA |
Transcript | >Ani_SJS72_1|g4718.t1 ATGAGTCAAATTCTTCTCAAGGCGCCGCTGCGCTTCAGCCACCAATTTCAAGCCCGAGCGTTATCAACTCAGCTA TGCAAGCTTGCTAGTCATCCCACCTCCATCCGCCCCTCCACCACCGAGATTCAAAATGCACGACTTTCGCCCCAA AATTTGGAGGTTGCCATGCGCAGCCTTCACCAGGATGGGCTGGTCGTGGTGGAGAATGTGATTCCTCATGATAGC CTGGATCGACTCAACGCAAAGATGACTGAGGATGCATACACACTTCGAAACAAAAAGGATGGTAGCCCGTTCAAC TACAACCCCGGAAATATCCAGCAGGATGCCCCGCCAGTGCGCGGATACTTCGACCCCCAGATCTTTCTAAACCCC ATTGCCACGCAGATCACTTCATCCGCATTGGGGCCCCGTCCGAAATGGACATTTTGTTCTGGCAACACCGCCATG CCACCCACCGCTGAGCACCCGCCCATGTCCCAGCCGGTTCACTCCGACGCCGACTTTGCGCATCCGTTCCATCCC TTCGCATATGTGATTAATGTGCCTCTCATCACAATGACCCCGGAGAACGGCTCCACCGAGGTGTGGCTCGGAACC CACACCGACACTGGACTCCATGTTCAAGAGGGGCTCCACGGTGAGCGCGCAAGTGGTCGAATCAAGCTCGATGAG CTCGAAAAGCGTCGGATAGAGCGGCCCCCTTGCCAGCCTACCGTTGCTAAGGGCTCTCTTGTTATCAGAGACCTA CGCCTGTGGCATGCCGGAATTGGCAACCAGACTGAGACTCCTCGCGTGATGCTGGCCATGATCCATTTTGCCTCG TGGTATCGTAACCCTATGAAGCTCGAGTTTGCCGATGACTTGAAGCCTCTCATTGGAAGTCAGGCTGACGTCGAA GTCCCATGCAACTGGGTGTCAAAGTCTGAGGCCATGTCGCGCTATTTGAACCGTGGTTTTGGCAATGCTTACGAC TTCAGCCAGGAGCCTTAA |
Gene | >Ani_SJS72_1|g4718.t1 ATGAGTCAAATTCTTCTCAAGGCGCCGCTGCGCTTCAGCCACCAATTTCAAGCCCGAGCGTTATCAACTCAGCTA TGCAAGCTTGCTAGTCATCCCACCTCCATCCGCCCCTCCACCACCGAGATTCAAAATGCACGACTTTCGCCCCAA AATTTGGAGGTTGCCATGCGCAGCCTTCACCAGGATGGGCTGGTCGTGGTGGAGAATGTGATTCCTCATGATAGC CTGGATCGACTCAACGCAAAGATGACTGAGGATGCATACACACTTCGAAACAAAAAGGATGGTAGCCCGTTCAAC TACAACCCCGGAAATATCCAGCAGGATGCCCCGCCAGTGCGCGGATACTTCGACCCCCAGATCTTTCTAAGTAAG CTCCAACGAGATCACAAACCTTTACCCCCTCTCTATACAATAGCTAACAGTTTCAAAAAGACCCCATTGCCACGC AGATCACTTCATCCGCATTGGGGCCCCGTCCGAAATGGACATTTTGTTCTGGCAACACCGCCATGCCACCCACCG CTGAGCACCCGCCCATGTCCCAGCCGGTTCACTCCGACGCCGACTTTGCGCATCCGTTCCATCCCTTCGCATATG TGATTAATGTGCCTCTCATCACAATGACCCCGGAGAACGGCTCCACCGAGGTGTGGCTCGGAACCCACACCGACA CTGGACTCCATGTTCAAGAGGGGCTCCACGGTGAGCGCGCAAGTGGTCGAATCAAGCTCGATGAGCTCGAAAAGC GTCGGATAGAGCGGCCCCCTTGCCAGCCTACCGTTGCTAAGGGCTCTCTTGTTATCAGAGACCTACGCCTGTGGC ATGCCGGAATTGGCAACCAGACTGAGACTCCTCGCGTGATGCTGGCCATGAGTAAGTCATCCTTTTTGATCGTGT CGGAAATAGGTAATCTCACACGAATAGTCCATTTTGCCTCGTGGTATCGTAACCCTATGAAGCTCGAGTTTGCCG ATGACTTGAAGCCTCTCATTGGAAGTCAGGCTGACGTCGAAGTCCCATGCAACTGGGTGTCAAAGTCTGAGGCCA TGTCGCGCTATTTGAACCGTGGTTTTGGCAATGCTTACGACTTCAGCCAGGAGCCTTAA |