Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS72_1|g4673.t1
Gene name
Locationscaffold_029:277967..279294
Strand-
Gene length (bp)1327
Transcript length (bp)1266
Coding sequence length (bp)1266
Protein length (aa) 422

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 24 0.45

Transmembrane Domains

Domain # Start End Length
1 5 22 17

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS72_1|g4673.t1
MKSYINLAIVAVLFASLYGPVTRELKVLGAFRSASETTSSQSNPVHPIADTIHCEDLHYYQPAGQLFTACEDSIV
PRFRWFPPLVNFDGPADTKGSIHVIDPQTLKSTRLTFENFSGPFVTHGIDITEDPERADAVYIFAVNHLANPDYH
PGLKDIPRARSQVELFHHVLHSGTVRHVRSIRHPLIITPNDIYAESPRSFYVTNDHRYRDGALRTVENILPAAKW
STVIHVQLDSLAAVPADTERKATVAFEHLWNANGLGHGSSREEVLLTSAAGGYMWRMRPQDDHTLSVVDEFAFDS
TIDNPTYYQDPYATATDDASGYVQGGLLRGVDLEKTRTDPNGKDGVMVWYTRRKADTTPAEWETRLLFEDDGSRI
RSASAALLVPLPDEQQQQQQQQQQKKARLFVTGFVSESMIAMDVAL*
Coding >Ani_SJS72_1|g4673.t1
ATGAAAAGCTATATCAACCTGGCGATCGTCGCCGTTCTGTTCGCCTCGCTGTATGGGCCAGTGACTCGCGAGCTC
AAAGTGCTAGGGGCGTTTCGCTCCGCCAGCGAGACGACCAGCTCCCAGAGCAACCCTGTCCACCCAATTGCTGAT
ACCATTCACTGTGAGGACCTGCATTACTACCAACCGGCCGGTCAGCTCTTCACAGCCTGCGAGGACTCCATCGTG
CCCCGGTTCCGGTGGTTTCCACCCTTGGTCAACTTTGATGGGCCTGCGGACACAAAGGGATCTATTCATGTGATT
GATCCGCAGACACTGAAGTCCACCCGTCTCACATTTGAGAACTTTTCCGGCCCCTTCGTCACCCACGGCATCGAC
ATCACCGAAGATCCGGAGCGCGCAGACGCCGTCTACATCTTCGCCGTTAACCATCTCGCCAACCCCGACTATCAC
CCCGGCCTCAAGGACATCCCCAGGGCCCGCTCGCAGGTCGAGCTCTTCCACCATGTCCTGCATTCCGGCACCGTC
CGGCATGTCCGCTCAATCCGTCATCCACTCATAATTACCCCCAACGACATCTACGCTGAAAGTCCTCGTTCCTTC
TACGTCACCAACGACCACCGCTACCGCGACGGGGCTCTCCGCACGGTCGAGAACATACTCCCCGCCGCCAAATGG
TCCACCGTCATCCACGTCCAGCTCGACAGTCTCGCCGCGGTCCCGGCGGACACGGAACGCAAGGCAACCGTGGCC
TTCGAGCATCTCTGGAACGCCAATGGTCTCGGACACGGCTCCTCGCGCGAGGAAGTGCTTCTCACCAGCGCTGCG
GGCGGCTACATGTGGCGTATGCGGCCGCAGGATGACCACACGCTGTCGGTTGTGGATGAGTTCGCCTTTGATAGC
ACTATTGACAACCCCACTTACTACCAGGACCCGTACGCAACGGCCACAGACGATGCCAGCGGATATGTGCAGGGT
GGACTGCTTCGCGGCGTGGACCTGGAGAAGACGCGCACGGATCCCAATGGCAAGGACGGGGTGATGGTGTGGTAT
ACGCGGCGCAAGGCTGATACTACACCCGCGGAATGGGAGACGCGGCTGCTTTTTGAGGACGATGGATCACGCATT
CGGAGTGCCAGCGCGGCGCTGCTGGTACCGTTGCCAGATGAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGAAG
AAGGCGAGATTGTTTGTGACGGGATTCGTCTCAGAGAGTATGATTGCGATGGATGTGGCGTTGTAA
Transcript >Ani_SJS72_1|g4673.t1
ATGAAAAGCTATATCAACCTGGCGATCGTCGCCGTTCTGTTCGCCTCGCTGTATGGGCCAGTGACTCGCGAGCTC
AAAGTGCTAGGGGCGTTTCGCTCCGCCAGCGAGACGACCAGCTCCCAGAGCAACCCTGTCCACCCAATTGCTGAT
ACCATTCACTGTGAGGACCTGCATTACTACCAACCGGCCGGTCAGCTCTTCACAGCCTGCGAGGACTCCATCGTG
CCCCGGTTCCGGTGGTTTCCACCCTTGGTCAACTTTGATGGGCCTGCGGACACAAAGGGATCTATTCATGTGATT
GATCCGCAGACACTGAAGTCCACCCGTCTCACATTTGAGAACTTTTCCGGCCCCTTCGTCACCCACGGCATCGAC
ATCACCGAAGATCCGGAGCGCGCAGACGCCGTCTACATCTTCGCCGTTAACCATCTCGCCAACCCCGACTATCAC
CCCGGCCTCAAGGACATCCCCAGGGCCCGCTCGCAGGTCGAGCTCTTCCACCATGTCCTGCATTCCGGCACCGTC
CGGCATGTCCGCTCAATCCGTCATCCACTCATAATTACCCCCAACGACATCTACGCTGAAAGTCCTCGTTCCTTC
TACGTCACCAACGACCACCGCTACCGCGACGGGGCTCTCCGCACGGTCGAGAACATACTCCCCGCCGCCAAATGG
TCCACCGTCATCCACGTCCAGCTCGACAGTCTCGCCGCGGTCCCGGCGGACACGGAACGCAAGGCAACCGTGGCC
TTCGAGCATCTCTGGAACGCCAATGGTCTCGGACACGGCTCCTCGCGCGAGGAAGTGCTTCTCACCAGCGCTGCG
GGCGGCTACATGTGGCGTATGCGGCCGCAGGATGACCACACGCTGTCGGTTGTGGATGAGTTCGCCTTTGATAGC
ACTATTGACAACCCCACTTACTACCAGGACCCGTACGCAACGGCCACAGACGATGCCAGCGGATATGTGCAGGGT
GGACTGCTTCGCGGCGTGGACCTGGAGAAGACGCGCACGGATCCCAATGGCAAGGACGGGGTGATGGTGTGGTAT
ACGCGGCGCAAGGCTGATACTACACCCGCGGAATGGGAGACGCGGCTGCTTTTTGAGGACGATGGATCACGCATT
CGGAGTGCCAGCGCGGCGCTGCTGGTACCGTTGCCAGATGAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGAAG
AAGGCGAGATTGTTTGTGACGGGATTCGTCTCAGAGAGTATGATTGCGATGGATGTGGCGTTGTAA
Gene >Ani_SJS72_1|g4673.t1
ATGAAAAGCTATATCAACCTGGCGATCGTCGCCGTTCTGTTCGCCTCGCTGTATGGGCCAGTGACTCGCGAGCTC
AAAGTGCTAGGGGCGTTTCGCTCCGCCAGCGAGACGACCAGCTCCCAGAGCAACCCTGTCCACCCAATTGCTGAT
ACCATTCACTGTGAGGACCTGCATTACTACCAACCGGCCGGTCAGCTCTTCACAGCCTGCGAGGACTCCATCGTG
CCCCGGTTCCGGTGGTTTCCACCCTTGGTCAACTTTGATGGGCCTGCGGACACAAAGGGATCTATTCATGTGATT
GATCCGCAGGTATGTATCCCCTAGCGTAACCCATAGTCATGAGCCAGCAGAAGACTCACCTGCTCGATAGACACT
GAAGTCCACCCGTCTCACATTTGAGAACTTTTCCGGCCCCTTCGTCACCCACGGCATCGACATCACCGAAGATCC
GGAGCGCGCAGACGCCGTCTACATCTTCGCCGTTAACCATCTCGCCAACCCCGACTATCACCCCGGCCTCAAGGA
CATCCCCAGGGCCCGCTCGCAGGTCGAGCTCTTCCACCATGTCCTGCATTCCGGCACCGTCCGGCATGTCCGCTC
AATCCGTCATCCACTCATAATTACCCCCAACGACATCTACGCTGAAAGTCCTCGTTCCTTCTACGTCACCAACGA
CCACCGCTACCGCGACGGGGCTCTCCGCACGGTCGAGAACATACTCCCCGCCGCCAAATGGTCCACCGTCATCCA
CGTCCAGCTCGACAGTCTCGCCGCGGTCCCGGCGGACACGGAACGCAAGGCAACCGTGGCCTTCGAGCATCTCTG
GAACGCCAATGGTCTCGGACACGGCTCCTCGCGCGAGGAAGTGCTTCTCACCAGCGCTGCGGGCGGCTACATGTG
GCGTATGCGGCCGCAGGATGACCACACGCTGTCGGTTGTGGATGAGTTCGCCTTTGATAGCACTATTGACAACCC
CACTTACTACCAGGACCCGTACGCAACGGCCACAGACGATGCCAGCGGATATGTGCAGGGTGGACTGCTTCGCGG
CGTGGACCTGGAGAAGACGCGCACGGATCCCAATGGCAAGGACGGGGTGATGGTGTGGTATACGCGGCGCAAGGC
TGATACTACACCCGCGGAATGGGAGACGCGGCTGCTTTTTGAGGACGATGGATCACGCATTCGGAGTGCCAGCGC
GGCGCTGCTGGTACCGTTGCCAGATGAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGAAGAAGGCGAGATTGTT
TGTGACGGGATTCGTCTCAGAGAGTATGATTGCGATGGATGTGGCGTTGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail