Protein ID | Ani_SJS72_1|g4670.t1 |
Gene name | |
Location | scaffold_029:272044..274890 |
Strand | + |
Gene length (bp) | 2846 |
Transcript length (bp) | 2616 |
Coding sequence length (bp) | 2616 |
Protein length (aa) | 872 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF13426 | PAS_9 | PAS domain | 2.2E-17 | 313 | 426 |
PF13426 | PAS_9 | PAS domain | 3.7E-02 | 510 | 588 |
PF13426 | PAS_9 | PAS domain | 4.1E-03 | 628 | 711 |
PF08447 | PAS_3 | PAS fold | 1.0E-10 | 515 | 591 |
PF00320 | GATA | GATA zinc finger | 5.0E-13 | 822 | 854 |
GO Term | Description | Terminal node |
---|---|---|
GO:0006355 | regulation of transcription, DNA-templated | Yes |
GO:0043565 | sequence-specific DNA binding | Yes |
GO:0005515 | protein binding | Yes |
GO:0050789 | regulation of biological process | No |
GO:0008150 | biological_process | No |
GO:0097159 | organic cyclic compound binding | No |
GO:0080090 | regulation of primary metabolic process | No |
GO:0010468 | regulation of gene expression | No |
GO:0065007 | biological regulation | No |
GO:0005488 | binding | No |
GO:0050794 | regulation of cellular process | No |
GO:0019222 | regulation of metabolic process | No |
GO:0003674 | molecular_function | No |
GO:2001141 | regulation of RNA biosynthetic process | No |
GO:0051171 | regulation of nitrogen compound metabolic process | No |
GO:1903506 | regulation of nucleic acid-templated transcription | No |
GO:0003676 | nucleic acid binding | No |
GO:0003677 | DNA binding | No |
GO:0019219 | regulation of nucleobase-containing compound metabolic process | No |
GO:0051252 | regulation of RNA metabolic process | No |
GO:0060255 | regulation of macromolecule metabolic process | No |
GO:0031323 | regulation of cellular metabolic process | No |
GO:0031326 | regulation of cellular biosynthetic process | No |
GO:1901363 | heterocyclic compound binding | No |
GO:0010556 | regulation of macromolecule biosynthetic process | No |
GO:0009889 | regulation of biosynthetic process | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 56 | 0.45 |
Transcription Factor Class (based on PFAM domains) |
---|
GATA type zinc finger |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS72_1|g4670.t1 MEGFDDAFYQAHYSMPDPQLGPAASSSSYSNAAPHPASLMSYNPTSGHFPPGSFAYPAQPSDLLAAGLPTTFASH PDNFSFQSPVPHAPHHHASPHPASFPGHVPHAMHPYHPLSAAAQSMPMGMDQGTAFPYDPAVFGASIGPLDPSLE QHSAPQHPHLPSQTVHLDPGAAYAVAQIQESATNTYWNQQTTTQDVSAQAQSAGPARGPSGDFSRARGPSQDHQP LPQSQPSDFQSYAQPANPAVPHRFIQPKRSSPVKASFPPQAKVEAESDSPYASIYSTSGFDIMGVLAQVVSRPNP KINIGAVDLSCAFVLCDITLEDHPIVYVSEAFERLTGYTNQEIVGQNCRFLQGPDGVVQRGMQRKFVDENTAYRL RSTIEERTEIQASIINYRKGGQPFVNLITMIPIRWGGSDYRFYVGFQVDLVETPDAVTRRNPNGTYMINYQRSQL PSYVVPSEVYRSNPDLATFFTPDQVSTVLESLRGSGPSYRHYLDRVLVENMDDIIHVLSFEGEFLYLSPSCQKVL EYEPAELVGKGLSAVCHPSDIGSVIRDLRARITTEPVSVVYRIRKKYSGYIWFESHGSWHITDRGRQFMVLGGRA RAVYNLDQVAAIGRGGLAENDIWAKLSMSGIVLFISSKARPVLGRVADDVIGKSIQDLTGADTRAQVMAALDTAR SGQQISFLHKVRHKKGHMLPVQTTLIPGDSKEGERPSFLVAQLRFHRPLPNGSPDDTSSSSTETARDAVAGQTGS VSRLPAGNQELIPLRERSLFTELAPTRGSSWQFELRELEKQNRTLSDEVQRLLTRRKKRKRKQSTIIVEKSCAMC RTKSTPEWRRGPSGNRDLCNSCGLRWAKQVRNAAQGQTTAARGKRS* |
Coding | >Ani_SJS72_1|g4670.t1 ATGGAAGGCTTCGACGATGCCTTCTATCAGGCACACTATTCCATGCCGGATCCCCAACTGGGCCCCGCCGCATCC TCTTCCTCCTACTCTAATGCTGCCCCCCATCCGGCTTCCTTGATGTCGTACAATCCCACTTCCGGCCACTTTCCT CCCGGTTCCTTTGCCTATCCGGCCCAACCCTCCGATCTGCTGGCTGCTGGCCTGCCCACGACCTTTGCGTCGCAC CCCGATAACTTTTCTTTTCAGTCTCCGGTTCCTCATGCTCCTCATCATCATGCTTCTCCCCACCCGGCCAGTTTC CCGGGGCATGTTCCCCACGCCATGCACCCCTACCATCCCCTGTCGGCCGCCGCGCAGTCCATGCCAATGGGCATG GACCAAGGAACTGCCTTTCCGTACGATCCCGCCGTCTTTGGCGCTTCTATTGGACCACTAGATCCAAGTCTAGAG CAGCATTCAGCACCGCAGCATCCTCACTTACCTTCCCAGACCGTTCATCTGGATCCAGGCGCGGCCTACGCGGTC GCACAGATCCAGGAGTCCGCCACAAATACCTACTGGAATCAACAGACGACGACACAGGATGTCAGCGCCCAGGCA CAGTCCGCAGGCCCGGCCCGCGGGCCATCTGGGGACTTCTCCCGCGCAAGAGGGCCATCCCAGGACCATCAACCG CTACCCCAAAGCCAACCCTCGGACTTTCAGTCCTATGCCCAACCGGCCAATCCAGCCGTTCCTCATCGCTTCATC CAGCCGAAGAGGTCATCCCCAGTGAAGGCCTCCTTTCCACCCCAGGCTAAAGTGGAAGCCGAAAGCGACTCTCCA TATGCTAGTATCTACTCGACAAGTGGCTTTGATATCATGGGGGTTCTGGCCCAGGTGGTGTCCCGGCCGAACCCC AAGATCAACATCGGGGCAGTTGACTTGTCGTGCGCGTTTGTTCTTTGTGACATCACGCTGGAGGACCATCCGATC GTCTACGTCTCGGAGGCGTTCGAACGGCTTACGGGCTACACCAATCAGGAGATTGTCGGGCAGAATTGTCGGTTC CTCCAAGGGCCGGATGGGGTCGTTCAGCGGGGCATGCAGCGCAAGTTTGTCGACGAGAATACGGCCTATCGCCTG CGCTCGACGATAGAGGAGCGGACGGAGATCCAGGCAAGCATTATCAACTACCGCAAGGGCGGCCAGCCTTTTGTG AACCTCATCACGATGATTCCGATCCGATGGGGCGGCAGCGACTACCGTTTTTACGTTGGGTTTCAGGTGGACCTG GTCGAGACGCCCGATGCAGTGACGCGACGGAATCCGAACGGAACGTACATGATCAACTATCAGCGCAGTCAGTTA CCGAGCTATGTGGTTCCGTCTGAAGTGTACCGCTCCAATCCGGATCTAGCTACGTTCTTTACTCCTGATCAGGTA TCCACGGTGTTGGAAAGCCTGCGCGGCAGCGGACCTTCGTACCGACATTACCTGGACCGGGTGCTGGTGGAGAAC ATGGACGATATCATCCACGTTCTATCTTTCGAGGGAGAGTTTCTATATCTGTCCCCCTCGTGTCAGAAGGTGCTG GAGTATGAGCCGGCTGAACTGGTCGGAAAGGGCCTGTCAGCCGTATGCCATCCCAGCGATATCGGTTCAGTCATT CGTGATCTACGAGCCCGCATCACCACCGAGCCGGTCAGCGTGGTGTATCGCATCCGAAAGAAATACAGTGGATAT ATCTGGTTTGAGAGCCATGGATCATGGCACATTACCGATCGGGGGCGACAATTCATGGTGCTTGGAGGGCGAGCG CGTGCGGTTTACAATCTTGATCAGGTTGCTGCAATTGGCCGAGGCGGGTTGGCGGAGAATGACATCTGGGCCAAG CTTTCGATGTCGGGGATCGTCCTGTTCATCTCGTCAAAAGCTCGGCCGGTTTTGGGTCGTGTGGCGGACGATGTC ATCGGAAAGAGCATCCAAGATCTCACAGGAGCAGATACCCGGGCCCAGGTCATGGCGGCGCTGGACACGGCTCGT TCGGGGCAACAGATCTCGTTTCTCCACAAGGTCCGCCACAAGAAGGGGCATATGCTGCCCGTGCAGACGACATTA ATACCTGGCGACAGCAAAGAAGGGGAGCGACCTTCCTTCCTAGTCGCCCAGTTGCGTTTCCACCGGCCTTTGCCG AACGGCAGCCCGGACGACACTAGCTCCAGCTCCACGGAAACAGCGCGAGACGCTGTTGCTGGCCAGACAGGATCG GTCAGTCGGTTACCAGCCGGCAATCAGGAACTCATCCCTCTACGCGAGCGCAGCCTTTTCACCGAGCTAGCACCG ACCAGAGGATCAAGCTGGCAGTTTGAGCTACGAGAACTGGAGAAGCAGAACCGCACATTGTCGGACGAGGTGCAA CGACTCCTTACACGGCGGAAGAAGCGCAAGCGCAAACAGAGCACAATTATAGTGGAGAAGAGCTGCGCGATGTGT CGGACGAAGAGCACGCCAGAATGGCGACGCGGACCCAGCGGCAACCGCGACCTATGCAACAGCTGTGGCTTACGA TGGGCGAAACAAGTCCGTAATGCCGCACAGGGACAGACTACCGCGGCCCGAGGAAAACGGTCGTGA |
Transcript | >Ani_SJS72_1|g4670.t1 ATGGAAGGCTTCGACGATGCCTTCTATCAGGCACACTATTCCATGCCGGATCCCCAACTGGGCCCCGCCGCATCC TCTTCCTCCTACTCTAATGCTGCCCCCCATCCGGCTTCCTTGATGTCGTACAATCCCACTTCCGGCCACTTTCCT CCCGGTTCCTTTGCCTATCCGGCCCAACCCTCCGATCTGCTGGCTGCTGGCCTGCCCACGACCTTTGCGTCGCAC CCCGATAACTTTTCTTTTCAGTCTCCGGTTCCTCATGCTCCTCATCATCATGCTTCTCCCCACCCGGCCAGTTTC CCGGGGCATGTTCCCCACGCCATGCACCCCTACCATCCCCTGTCGGCCGCCGCGCAGTCCATGCCAATGGGCATG GACCAAGGAACTGCCTTTCCGTACGATCCCGCCGTCTTTGGCGCTTCTATTGGACCACTAGATCCAAGTCTAGAG CAGCATTCAGCACCGCAGCATCCTCACTTACCTTCCCAGACCGTTCATCTGGATCCAGGCGCGGCCTACGCGGTC GCACAGATCCAGGAGTCCGCCACAAATACCTACTGGAATCAACAGACGACGACACAGGATGTCAGCGCCCAGGCA CAGTCCGCAGGCCCGGCCCGCGGGCCATCTGGGGACTTCTCCCGCGCAAGAGGGCCATCCCAGGACCATCAACCG CTACCCCAAAGCCAACCCTCGGACTTTCAGTCCTATGCCCAACCGGCCAATCCAGCCGTTCCTCATCGCTTCATC CAGCCGAAGAGGTCATCCCCAGTGAAGGCCTCCTTTCCACCCCAGGCTAAAGTGGAAGCCGAAAGCGACTCTCCA TATGCTAGTATCTACTCGACAAGTGGCTTTGATATCATGGGGGTTCTGGCCCAGGTGGTGTCCCGGCCGAACCCC AAGATCAACATCGGGGCAGTTGACTTGTCGTGCGCGTTTGTTCTTTGTGACATCACGCTGGAGGACCATCCGATC GTCTACGTCTCGGAGGCGTTCGAACGGCTTACGGGCTACACCAATCAGGAGATTGTCGGGCAGAATTGTCGGTTC CTCCAAGGGCCGGATGGGGTCGTTCAGCGGGGCATGCAGCGCAAGTTTGTCGACGAGAATACGGCCTATCGCCTG CGCTCGACGATAGAGGAGCGGACGGAGATCCAGGCAAGCATTATCAACTACCGCAAGGGCGGCCAGCCTTTTGTG AACCTCATCACGATGATTCCGATCCGATGGGGCGGCAGCGACTACCGTTTTTACGTTGGGTTTCAGGTGGACCTG GTCGAGACGCCCGATGCAGTGACGCGACGGAATCCGAACGGAACGTACATGATCAACTATCAGCGCAGTCAGTTA CCGAGCTATGTGGTTCCGTCTGAAGTGTACCGCTCCAATCCGGATCTAGCTACGTTCTTTACTCCTGATCAGGTA TCCACGGTGTTGGAAAGCCTGCGCGGCAGCGGACCTTCGTACCGACATTACCTGGACCGGGTGCTGGTGGAGAAC ATGGACGATATCATCCACGTTCTATCTTTCGAGGGAGAGTTTCTATATCTGTCCCCCTCGTGTCAGAAGGTGCTG GAGTATGAGCCGGCTGAACTGGTCGGAAAGGGCCTGTCAGCCGTATGCCATCCCAGCGATATCGGTTCAGTCATT CGTGATCTACGAGCCCGCATCACCACCGAGCCGGTCAGCGTGGTGTATCGCATCCGAAAGAAATACAGTGGATAT ATCTGGTTTGAGAGCCATGGATCATGGCACATTACCGATCGGGGGCGACAATTCATGGTGCTTGGAGGGCGAGCG CGTGCGGTTTACAATCTTGATCAGGTTGCTGCAATTGGCCGAGGCGGGTTGGCGGAGAATGACATCTGGGCCAAG CTTTCGATGTCGGGGATCGTCCTGTTCATCTCGTCAAAAGCTCGGCCGGTTTTGGGTCGTGTGGCGGACGATGTC ATCGGAAAGAGCATCCAAGATCTCACAGGAGCAGATACCCGGGCCCAGGTCATGGCGGCGCTGGACACGGCTCGT TCGGGGCAACAGATCTCGTTTCTCCACAAGGTCCGCCACAAGAAGGGGCATATGCTGCCCGTGCAGACGACATTA ATACCTGGCGACAGCAAAGAAGGGGAGCGACCTTCCTTCCTAGTCGCCCAGTTGCGTTTCCACCGGCCTTTGCCG AACGGCAGCCCGGACGACACTAGCTCCAGCTCCACGGAAACAGCGCGAGACGCTGTTGCTGGCCAGACAGGATCG GTCAGTCGGTTACCAGCCGGCAATCAGGAACTCATCCCTCTACGCGAGCGCAGCCTTTTCACCGAGCTAGCACCG ACCAGAGGATCAAGCTGGCAGTTTGAGCTACGAGAACTGGAGAAGCAGAACCGCACATTGTCGGACGAGGTGCAA CGACTCCTTACACGGCGGAAGAAGCGCAAGCGCAAACAGAGCACAATTATAGTGGAGAAGAGCTGCGCGATGTGT CGGACGAAGAGCACGCCAGAATGGCGACGCGGACCCAGCGGCAACCGCGACCTATGCAACAGCTGTGGCTTACGA TGGGCGAAACAAGTCCGTAATGCCGCACAGGGACAGACTACCGCGGCCCGAGGAAAACGGTCGTGA |
Gene | >Ani_SJS72_1|g4670.t1 ATGGAAGGCTTCGACGATGCCTTCTATCAGGCACACTATTCCATGCCGGATCCCCAACTGGGCCCCGCCGCATCC TCTTCCTCCTACTCTAATGCTGCCCCCCATCCGGCTTCCTTGATGTCGTACAATCCCACTTCCGGCCACTTTCCT CCCGGTTCCTTTGCCTATCCGGCCCAACCCTCCGATCTGCTGGCTGCTGGCCTGCCCACGACCTTTGCGTCGCAC CCCGATAACTTTTCTTTTCAGTCTCCGGTTCCTCATGCTCCTCATCATCATGCTTCTCCCCACCCGGCCAGTTTC CCGGGGCATGTTCCCCACGCCATGCACCCCTACCATCCCCTGTCGGCCGCCGCGCAGTCCATGCCAATGGGCATG GACCAAGGAACTGCCTTTCCGTACGATCCCGCCGTCTTTGGCGCTTCTATTGGACCACTAGATCCAAGTCTAGAG CAGCATTCAGCACCGCAGCATCCTCACTTACCTTCCCAGACCGTTCATCTGGATCCAGGCGCGGCCTACGCGGTC GCACAGATCCAGGAGTCCGCCACAAATACCTACTGGAATCAACAGACGACGACACAGGATGTCAGCGCCCAGGCA CAGTCCGCAGGCCCGGCCCGCGGGCCATCTGGGGACTTCTCCCGCGCAAGAGGGCCATCCCAGGACCATCAACCG CTACCCCAAAGCCAACCCTCGGACTTTCAGTCCTATGCCCAACCGGCCAATCCAGCCGTTCCTCATCGCTTCATC CAGCCGAAGAGGTCATCCCCAGTGAAGGGTGGGTTCTCCTCCAATCCAAGTCGAACCTGACCGGAAAAGCTGATG CGGGTCTTCTACGTCCATGAAGCCTCCTTTCCACCCCAGGCTAAAGTGGAAGCCGAAAGCGACTCTCCATATGCT AGTATCTACTCGACAAGTGGCTTTGATATCATGGGGGTTCTGGTAGGTTGCATGCTGGTCGACCGCTTCCGCAGC AGCGTTTGAGTCCGGAAGAGGTACACTCTCGCTTCACATGTATGTGGCTGACCTCTCTCCTATTAGGCCCAGGTG GTGTCCCGGCCGAACCCCAAGATCAACATCGGGGCAGTTGACTTGTCGTGCGCGTTTGTTCTTTGTGACATCACG CTGGAGGACCATCCGATCGTCTACGTCTCGGAGGCGTTCGAACGGCTTACGGGCTACACCAATCAGGAGATTGTC GGGCAGAATTGTCGGTTCCTCCAAGGGCCGGATGGGGTCGTTCAGCGGGGCATGCAGCGCAAGTTTGTCGACGAG AATACGGCCTATCGCCTGCGCTCGACGATAGAGGAGCGGACGGAGATCCAGGCAAGCATTATCAACTACCGCAAG GGCGGCCAGCCTTTTGTGAACCTCATCACGATGATTCCGATCCGATGGGGCGGCAGCGACTACCGTTTTTACGTT GGGTTTCAGGTGGACCTGGTCGAGACGCCCGATGCAGTGACGCGACGGAATCCGAGTACGTCCTTTATGTGGTTG GGTTGTTTTTTTGATGCTCCTAAGCTAACCATTTCTTTGCAGACGGAACGTACATGATCAACTATCAGCGCAGTC AGTTACCGAGCTATGTGGTTCCGTCTGAAGTGTACCGCTCCAATCCGGATCTAGCTACGTTCTTTACTCCTGATC AGGTATCCACGGTGTTGGAAAGCCTGCGCGGCAGCGGACCTTCGTACCGACATTACCTGGACCGGGTGCTGGTGG AGAACATGGACGATATCATCCACGTTCTATCTTTCGAGGGAGAGTTTCTATATCTGTCCCCCTCGTGTCAGAAGG TGCTGGAGTATGAGCCGGCTGAACTGGTCGGAAAGGGCCTGTCAGCCGTATGCCATCCCAGCGATATCGGTTCAG TCATTCGTGATCTACGAGCCCGCATCACCACCGAGCCGGTCAGCGTGGTGTATCGCATCCGAAAGAAATACAGTG GATATATCTGGTTTGAGAGCCATGGATCATGGCACATTACCGATCGGGGGCGACAATTCATGGTGCTTGGAGGGC GAGCGCGTGCGGTTTACAATCTTGATCAGGTTGCTGCAATTGGCCGAGGCGGGTTGGCGGAGAATGACATCTGGG CCAAGCTTTCGATGTCGGGGATCGTCCTGTTCATCTCGTCAAAAGCTCGGCCGGTTTTGGGTCGTGTGGCGGACG ATGTCATCGGAAAGAGCATCCAAGATCTCACAGGAGCAGATACCCGGGCCCAGGTCATGGCGGCGCTGGACACGG CTCGTTCGGGGCAACAGATCTCGTTTCTCCACAAGGTCCGCCACAAGAAGGGGCATATGCTGCCCGTGCAGACGA CATTAATACCTGGCGACAGCAAAGAAGGGGAGCGACCTTCCTTCCTAGTCGCCCAGTTGCGTTTCCACCGGCCTT TGCCGAACGGCAGCCCGGACGACACTAGCTCCAGCTCCACGGAAACAGCGCGAGACGCTGTTGCTGGCCAGACAG GATCGGTCAGTCGGTTACCAGCCGGCAATCAGGAACTCATCCCTCTACGCGAGCGCAGCCTTTTCACCGAGCTAG CACCGACCAGAGGATCAAGCTGGCAGTTTGAGCTACGAGAACTGGAGAAGCAGAACCGCACATTGTCGGACGAGG TGCAACGACTCCTTACACGGCGGAAGAAGCGCAAGCGCAAACAGAGCACAATTATAGTGGAGAAGAGCTGCGCGA TGTGTCGGACGAAGAGCACGCCAGAATGGCGACGCGGACCCAGCGGCAACCGCGACCTATGCAACAGCTGTGGCT TACGATGGGCGAAACAAGTCCGTAATGCCGCACAGGGACAGACTACCGCGGCCCGAGGAAAACGGTCGTGA |