Protein ID | Ani_SJS72_1|g4644.t1 |
Gene name | |
Location | scaffold_029:176763..178678 |
Strand | - |
Gene length (bp) | 1915 |
Transcript length (bp) | 1803 |
Coding sequence length (bp) | 1803 |
Protein length (aa) | 601 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF11700 | ATG22 | Vacuole effluxer Atg22 like | 2.7E-186 | 30 | 575 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 30 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 35 | 57 | 22 |
2 | 118 | 140 | 22 |
3 | 149 | 168 | 19 |
4 | 172 | 194 | 22 |
5 | 272 | 294 | 22 |
6 | 304 | 321 | 17 |
7 | 381 | 403 | 22 |
8 | 413 | 435 | 22 |
9 | 447 | 469 | 22 |
10 | 484 | 506 | 22 |
11 | 518 | 540 | 22 |
12 | 550 | 567 | 17 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS72_1|g4644.t1 MAFASPPASPPDEDGQARAPRYPGEDTTPTSRQEIWGWYAYGIAAEVFAVCGVGSFLPLTLEQLARERGFLQSSH LPCVGPDSPSAPKESSPAMFRRDDTNEQCVVGLMGLEINTASFAMYTFSLAVLVQALTLISFSALADYENNRKTL LVTFGFIGSATSMLFVFIAPPVFVLGALLVVVGVVCLGSSFVVLNSFLPVLVASDPSIQNSNKESAAELHRLDPE AEYVHARTSFDRDEPTHRPPTGLGLGGATGTSSPELQLSTKISSKGVGLGYCAAVFVQILSILLLFTLSKTSISK ASGTLPLRFVLLLVGIWWFSFTMVSRRWLRNRPGPPLESTSTGASSHQPRWRIWLHLVAFAWKSLWKTVKIALKL REVIVFLVAWFLLSDAMATVSGTAILFARTELKMSTTMVALLSITATLSGMAGAFLWPIVSRYFGLKSNHTIMVC IALFELIPLYGMLAYIPLFKKWGVIGLQQPWEIYPLAIVHGVVSGGLSSYCRSFFGLLIPPGMEAAFYALYAATD KGSSFIGPAIVGVLIDATGQVRSGFFFIAVLIVLPIPLVWMVDAEKGRKEGLKISEDVVRGGEGEDEEVEGLLAR * |
Coding | >Ani_SJS72_1|g4644.t1 ATGGCTTTTGCATCTCCGCCGGCCTCTCCTCCGGATGAGGATGGCCAGGCCCGCGCGCCGCGCTATCCCGGCGAG GATACAACACCCACCAGCCGCCAGGAAATCTGGGGATGGTACGCCTATGGTATCGCTGCTGAAGTGTTTGCGGTA TGCGGCGTAGGCTCATTCCTTCCCCTCACACTGGAGCAATTGGCCCGTGAGCGCGGGTTCCTCCAAAGCAGCCAT CTGCCGTGCGTCGGTCCCGACTCGCCCTCCGCGCCCAAGGAATCTTCACCAGCCATGTTCCGCCGCGATGACACC AATGAGCAGTGTGTGGTTGGACTGATGGGATTAGAGATCAACACGGCCAGTTTCGCCATGTATACCTTCTCTCTG GCGGTTCTGGTGCAGGCGTTGACTCTAATCTCGTTCAGCGCACTGGCAGACTATGAGAACAACCGCAAGACCCTT CTCGTCACATTTGGATTTATTGGATCAGCAACAAGCATGCTGTTTGTTTTCATCGCGCCCCCAGTATTCGTGCTG GGCGCGCTCTTGGTCGTCGTTGGAGTCGTCTGTCTCGGGTCATCCTTTGTCGTACTGAACTCATTCCTACCAGTG CTCGTCGCAAGTGACCCATCCATTCAGAACAGCAACAAGGAATCTGCCGCCGAACTGCATCGGCTGGATCCAGAA GCCGAATACGTGCATGCCCGCACATCCTTTGACAGGGACGAACCAACCCATCGCCCTCCGACCGGGCTCGGCTTA GGCGGCGCAACAGGCACTTCCTCCCCAGAATTGCAGCTGTCCACCAAGATTTCCTCCAAGGGCGTTGGTCTGGGC TACTGCGCAGCAGTATTTGTCCAAATCCTTAGCATCTTGCTCCTCTTCACTCTGTCCAAAACTTCGATCTCCAAA GCCTCTGGCACGCTCCCTTTGCGCTTCGTGCTCTTGCTCGTCGGCATTTGGTGGTTCAGCTTCACCATGGTGAGC CGGCGCTGGCTGCGCAACCGTCCCGGTCCACCCCTCGAATCTACTTCAACCGGCGCGAGTAGCCACCAACCGCGC TGGCGCATCTGGCTTCACCTCGTCGCCTTTGCGTGGAAGTCACTGTGGAAAACGGTCAAAATCGCGCTCAAGCTT CGCGAAGTGATTGTGTTCCTCGTGGCGTGGTTCCTCCTGTCAGACGCAATGGCCACCGTCTCGGGAACAGCGATC CTGTTCGCCCGCACCGAACTCAAAATGAGCACAACTATGGTTGCCCTCCTTTCCATTACTGCGACATTGTCCGGC ATGGCAGGAGCGTTCCTGTGGCCTATTGTTTCCCGGTACTTCGGTCTCAAGTCCAACCACACCATCATGGTCTGC ATTGCGTTGTTCGAGCTCATTCCCCTTTACGGTATGCTTGCATACATTCCCCTATTCAAGAAATGGGGCGTGATC GGACTGCAGCAGCCATGGGAAATTTACCCGCTTGCCATCGTGCATGGCGTCGTTTCCGGCGGGTTGTCCTCGTAT TGTCGGAGTTTCTTTGGGTTGCTGATTCCTCCTGGTATGGAAGCTGCGTTCTATGCACTTTACGCTGCGACAGAC AAGGGGAGCTCGTTTATCGGGCCTGCAATTGTCGGGGTGCTAATTGATGCGACAGGACAGGTGAGGAGTGGGTTC TTCTTCATTGCGGTGTTGATTGTGTTGCCTATTCCTCTGGTGTGGATGGTGGATGCGGAGAAAGGAAGAAAAGAG GGACTCAAGATTTCAGAGGATGTGGTGAGGGGTGGAGAGGGAGAGGATGAGGAAGTGGAGGGATTGCTCGCCCGG TAG |
Transcript | >Ani_SJS72_1|g4644.t1 ATGGCTTTTGCATCTCCGCCGGCCTCTCCTCCGGATGAGGATGGCCAGGCCCGCGCGCCGCGCTATCCCGGCGAG GATACAACACCCACCAGCCGCCAGGAAATCTGGGGATGGTACGCCTATGGTATCGCTGCTGAAGTGTTTGCGGTA TGCGGCGTAGGCTCATTCCTTCCCCTCACACTGGAGCAATTGGCCCGTGAGCGCGGGTTCCTCCAAAGCAGCCAT CTGCCGTGCGTCGGTCCCGACTCGCCCTCCGCGCCCAAGGAATCTTCACCAGCCATGTTCCGCCGCGATGACACC AATGAGCAGTGTGTGGTTGGACTGATGGGATTAGAGATCAACACGGCCAGTTTCGCCATGTATACCTTCTCTCTG GCGGTTCTGGTGCAGGCGTTGACTCTAATCTCGTTCAGCGCACTGGCAGACTATGAGAACAACCGCAAGACCCTT CTCGTCACATTTGGATTTATTGGATCAGCAACAAGCATGCTGTTTGTTTTCATCGCGCCCCCAGTATTCGTGCTG GGCGCGCTCTTGGTCGTCGTTGGAGTCGTCTGTCTCGGGTCATCCTTTGTCGTACTGAACTCATTCCTACCAGTG CTCGTCGCAAGTGACCCATCCATTCAGAACAGCAACAAGGAATCTGCCGCCGAACTGCATCGGCTGGATCCAGAA GCCGAATACGTGCATGCCCGCACATCCTTTGACAGGGACGAACCAACCCATCGCCCTCCGACCGGGCTCGGCTTA GGCGGCGCAACAGGCACTTCCTCCCCAGAATTGCAGCTGTCCACCAAGATTTCCTCCAAGGGCGTTGGTCTGGGC TACTGCGCAGCAGTATTTGTCCAAATCCTTAGCATCTTGCTCCTCTTCACTCTGTCCAAAACTTCGATCTCCAAA GCCTCTGGCACGCTCCCTTTGCGCTTCGTGCTCTTGCTCGTCGGCATTTGGTGGTTCAGCTTCACCATGGTGAGC CGGCGCTGGCTGCGCAACCGTCCCGGTCCACCCCTCGAATCTACTTCAACCGGCGCGAGTAGCCACCAACCGCGC TGGCGCATCTGGCTTCACCTCGTCGCCTTTGCGTGGAAGTCACTGTGGAAAACGGTCAAAATCGCGCTCAAGCTT CGCGAAGTGATTGTGTTCCTCGTGGCGTGGTTCCTCCTGTCAGACGCAATGGCCACCGTCTCGGGAACAGCGATC CTGTTCGCCCGCACCGAACTCAAAATGAGCACAACTATGGTTGCCCTCCTTTCCATTACTGCGACATTGTCCGGC ATGGCAGGAGCGTTCCTGTGGCCTATTGTTTCCCGGTACTTCGGTCTCAAGTCCAACCACACCATCATGGTCTGC ATTGCGTTGTTCGAGCTCATTCCCCTTTACGGTATGCTTGCATACATTCCCCTATTCAAGAAATGGGGCGTGATC GGACTGCAGCAGCCATGGGAAATTTACCCGCTTGCCATCGTGCATGGCGTCGTTTCCGGCGGGTTGTCCTCGTAT TGTCGGAGTTTCTTTGGGTTGCTGATTCCTCCTGGTATGGAAGCTGCGTTCTATGCACTTTACGCTGCGACAGAC AAGGGGAGCTCGTTTATCGGGCCTGCAATTGTCGGGGTGCTAATTGATGCGACAGGACAGGTGAGGAGTGGGTTC TTCTTCATTGCGGTGTTGATTGTGTTGCCTATTCCTCTGGTGTGGATGGTGGATGCGGAGAAAGGAAGAAAAGAG GGACTCAAGATTTCAGAGGATGTGGTGAGGGGTGGAGAGGGAGAGGATGAGGAAGTGGAGGGATTGCTCGCCCGG TAG |
Gene | >Ani_SJS72_1|g4644.t1 ATGGCTTTTGCATCTCCGCCGGCCTCTCCTCCGGATGAGGATGGCCAGGCCCGCGCGCCGCGCTATCCCGGCGAG GATACAACACCCACCAGCCGCCAGGAAATCTGGGGATGGTACGCCTATGGTATCGCTGCTGAAGTGTTTGCGGTA TGCGGCGTAGGTGTGTGATGCCTTCCTTGAATCCAATCCGGTATCTGCGATGCTAAAGATCTTGTATAGGCTCAT TCCTTCCCCTCACACTGGAGCAATTGGCCCGTGAGCGCGGGTTCCTCCAAAGCAGCCATCTGCCGTGCGTCGGTC CCGACTCGCCCTCCGCGCCCAAGGAATCTTCACCAGCCATGTTCCGCCGCGATGACACCAATGAGCAGTGTGTGG TTGGACTGATGGGATTAGAGATCAACACGGCCAGTTTCGCCATGTATACCTTCTCTCTGGCGGTTCTGGTGCAGG CGTTGACTCTAATCTCGTTCAGCGCACTGGCAGACTATGGTATGACCTGTTGCCCTATTGTTTCATAAAGCAATA CTGAGAATGCAATATAGAGAACAACCGCAAGACCCTTCTCGTCACATTTGGATTTATTGGATCAGCAACAAGCAT GCTGTTTGTTTTCATCGCGCCCCCAGTATTCGTGCTGGGCGCGCTCTTGGTCGTCGTTGGAGTCGTCTGTCTCGG GTCATCCTTTGTCGTACTGAACTCATTCCTACCAGTGCTCGTCGCAAGTGACCCATCCATTCAGAACAGCAACAA GGAATCTGCCGCCGAACTGCATCGGCTGGATCCAGAAGCCGAATACGTGCATGCCCGCACATCCTTTGACAGGGA CGAACCAACCCATCGCCCTCCGACCGGGCTCGGCTTAGGCGGCGCAACAGGCACTTCCTCCCCAGAATTGCAGCT GTCCACCAAGATTTCCTCCAAGGGCGTTGGTCTGGGCTACTGCGCAGCAGTATTTGTCCAAATCCTTAGCATCTT GCTCCTCTTCACTCTGTCCAAAACTTCGATCTCCAAAGCCTCTGGCACGCTCCCTTTGCGCTTCGTGCTCTTGCT CGTCGGCATTTGGTGGTTCAGCTTCACCATGGTGAGCCGGCGCTGGCTGCGCAACCGTCCCGGTCCACCCCTCGA ATCTACTTCAACCGGCGCGAGTAGCCACCAACCGCGCTGGCGCATCTGGCTTCACCTCGTCGCCTTTGCGTGGAA GTCACTGTGGAAAACGGTCAAAATCGCGCTCAAGCTTCGCGAAGTGATTGTGTTCCTCGTGGCGTGGTTCCTCCT GTCAGACGCAATGGCCACCGTCTCGGGAACAGCGATCCTGTTCGCCCGCACCGAACTCAAAATGAGCACAACTAT GGTTGCCCTCCTTTCCATTACTGCGACATTGTCCGGCATGGCAGGAGCGTTCCTGTGGCCTATTGTTTCCCGGTA CTTCGGTCTCAAGTCCAACCACACCATCATGGTCTGCATTGCGTTGTTCGAGCTCATTCCCCTTTACGGTATGCT TGCATACATTCCCCTATTCAAGAAATGGGGCGTGATCGGACTGCAGCAGCCATGGGAAATTTACCCGCTTGCCAT CGTGCATGGCGTCGTTTCCGGCGGGTTGTCCTCGTATTGTCGGAGTTTCTTTGGGTTGCTGATTCCTCCTGGTAT GGAAGCTGCGTTCTATGCACTTTACGCTGCGACAGACAAGGGGAGCTCGTTTATCGGGCCTGCAATTGTCGGGGT GCTAATTGATGCGACAGGACAGGTGAGGAGTGGGTTCTTCTTCATTGCGGTGTTGATTGTGTTGCCTATTCCTCT GGTGTGGATGGTGGATGCGGAGAAAGGAAGAAAAGAGGGACTCAAGATTTCAGAGGATGTGGTGAGGGGTGGAGA GGGAGAGGATGAGGAAGTGGAGGGATTGCTCGCCCGGTAG |