Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS72_1|g4624.t1
Gene name
Locationscaffold_029:123727..124525
Strand-
Gene length (bp)798
Transcript length (bp)666
Coding sequence length (bp)666
Protein length (aa) 222

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13460 NAD_binding_10 NAD(P)H-binding 2.8E-38 7 208
PF01370 Epimerase NAD dependent epimerase/dehydratase family 4.8E-08 3 115

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 12 0.45

Transmembrane Domains

Domain # Start End Length
1 113 135 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS72_1|g4624.t1
MRALVIGGTGRCGRLVIDELLRRGHHQVTTLARTPDALGDPRPSLNVIQGTPMNLDDVRAAFKADKPDVVIVTLN
APRASDSPFAAPISPPRLMADCNANVVAAMKEFGVRKIVILQAFGVGASWTNLHILLRLLMKTSNMSHQYDDHNE
TEREVLASGVDYVFVRPSRLVETDETAIKVWPDDGKGVPMMASTSRISVARYLVDVAEGDEWDNTAPVITN*
Coding >Ani_SJS72_1|g4624.t1
ATGCGCGCACTAGTGATTGGCGGGACTGGGCGTTGTGGCAGACTTGTCATTGATGAGCTGTTGAGGCGAGGCCAC
CACCAGGTCACTACCTTAGCGCGAACACCAGATGCGCTGGGAGATCCACGACCTAGCCTAAATGTCATCCAAGGC
ACTCCGATGAATCTAGATGACGTACGAGCTGCGTTTAAAGCAGACAAACCAGACGTGGTGATTGTGACGCTGAAT
GCGCCTCGAGCGAGCGATAGTCCATTTGCTGCTCCCATCTCTCCGCCTCGTCTAATGGCCGACTGCAACGCCAAT
GTAGTGGCTGCGATGAAAGAGTTTGGGGTTCGCAAGATCGTGATTCTCCAGGCGTTCGGGGTGGGAGCATCTTGG
ACTAATCTGCACATCCTGCTACGTCTACTCATGAAGACATCTAATATGTCACATCAGTACGATGATCACAACGAG
ACAGAGAGGGAAGTCCTGGCCAGCGGGGTCGATTATGTGTTTGTGCGGCCGTCCCGGCTGGTCGAAACCGATGAA
ACCGCCATCAAGGTGTGGCCGGATGATGGCAAGGGAGTTCCTATGATGGCCAGTACAAGCCGGATCAGCGTGGCA
CGATATTTGGTCGATGTGGCCGAGGGTGATGAATGGGATAACACGGCTCCAGTTATCACCAACTGA
Transcript >Ani_SJS72_1|g4624.t1
ATGCGCGCACTAGTGATTGGCGGGACTGGGCGTTGTGGCAGACTTGTCATTGATGAGCTGTTGAGGCGAGGCCAC
CACCAGGTCACTACCTTAGCGCGAACACCAGATGCGCTGGGAGATCCACGACCTAGCCTAAATGTCATCCAAGGC
ACTCCGATGAATCTAGATGACGTACGAGCTGCGTTTAAAGCAGACAAACCAGACGTGGTGATTGTGACGCTGAAT
GCGCCTCGAGCGAGCGATAGTCCATTTGCTGCTCCCATCTCTCCGCCTCGTCTAATGGCCGACTGCAACGCCAAT
GTAGTGGCTGCGATGAAAGAGTTTGGGGTTCGCAAGATCGTGATTCTCCAGGCGTTCGGGGTGGGAGCATCTTGG
ACTAATCTGCACATCCTGCTACGTCTACTCATGAAGACATCTAATATGTCACATCAGTACGATGATCACAACGAG
ACAGAGAGGGAAGTCCTGGCCAGCGGGGTCGATTATGTGTTTGTGCGGCCGTCCCGGCTGGTCGAAACCGATGAA
ACCGCCATCAAGGTGTGGCCGGATGATGGCAAGGGAGTTCCTATGATGGCCAGTACAAGCCGGATCAGCGTGGCA
CGATATTTGGTCGATGTGGCCGAGGGTGATGAATGGGATAACACGGCTCCAGTTATCACCAACTGA
Gene >Ani_SJS72_1|g4624.t1
ATGCGCGCACTAGTGATTGGCGGGACTGGGCGTTGTGGCAGACTTGTCATTGATGAGCTGTTGAGGCGAGGTAGG
CTTCTACTATGTTATACTACCTCAGACACGTTGATGAATATGGCTAACATACCCAAGGCCACCACCAGGTCACTA
CCTTAGCGCGAACACCAGATGCGCTGGGAGATCCACGACCTAGCCTAAATGTCATCCAAGGTTAGTACACAATGA
ATTCTTGCTGCTGCTGCTGCTTGTTGTAATATGTTCCACGGCTGACATGTCCCAGGCACTCCGATGAATCTAGAT
GACGTACGAGCTGCGTTTAAAGCAGACAAACCAGACGTGGTGATTGTGACGCTGAATGCGCCTCGAGCGAGCGAT
AGTCCATTTGCTGCTCCCATCTCTCCGCCTCGTCTAATGGCCGACTGCAACGCCAATGTAGTGGCTGCGATGAAA
GAGTTTGGGGTTCGCAAGATCGTGATTCTCCAGGCGTTCGGGGTGGGAGCATCTTGGACTAATCTGCACATCCTG
CTACGTCTACTCATGAAGACATCTAATATGTCACATCAGTACGATGATCACAACGAGACAGAGAGGGAAGTCCTG
GCCAGCGGGGTCGATTATGTGTTTGTGCGGCCGTCCCGGCTGGTCGAAACCGATGAAACCGCCATCAAGGTGTGG
CCGGATGATGGCAAGGGAGTTCCTATGATGGCCAGTACAAGCCGGATCAGCGTGGCACGATATTTGGTCGATGTG
GCCGAGGGTGATGAATGGGATAACACGGCTCCAGTTATCACCAACTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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