Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS72_1|g4604.t1
Gene name
Locationscaffold_029:76468..77305
Strand+
Gene length (bp)837
Transcript length (bp)837
Coding sequence length (bp)837
Protein length (aa) 279

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF06293 Kdo Lipopolysaccharide kinase (Kdo/WaaP) family 6.3E-07 148 236

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 44 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS72_1|g4604.t1
MTLITQGAEAHLYKTTYLSPTTPAALKIRPTKPYRHPILDRRLTRARVLQEARCLVRLVREGVNVPAVLAVDWDI
NNKNNNNGGEGDDNDVRGNGAWILMEWIEGCVVRVVIQRWERYIKSRAGSGSGVGAKRQVDGEVKEQDNEIEEEE
KKVKGLLRRIGAAVGALHKAGVVHGDLTTSNLILRGADEGGDGDGASPDMQGEVVLIDFGLASQSIQDEDRAVDL
YVLERAFGSTHPRTEPLFGEVLEGYRASYRGSGSVLKRLEDVRMRGRKRSMLG*
Coding >Ani_SJS72_1|g4604.t1
ATGACCCTAATAACCCAAGGCGCCGAAGCTCACCTCTACAAAACGACCTACCTATCACCGACCACCCCCGCGGCA
CTAAAAATCCGCCCGACAAAGCCCTACCGCCACCCGATCCTCGACCGGCGATTGACGCGTGCTCGCGTCCTCCAG
GAAGCGCGGTGCTTGGTGCGTCTTGTGCGCGAGGGGGTGAATGTTCCGGCGGTGTTGGCGGTGGACTGGGATATC
AACAACAAGAACAACAATAATGGGGGTGAGGGAGATGATAATGATGTGAGAGGCAACGGAGCCTGGATCCTCATG
GAATGGATCGAGGGATGTGTGGTACGGGTTGTGATTCAACGGTGGGAGCGGTATATCAAGTCTCGTGCTGGGTCT
GGTTCTGGTGTGGGGGCGAAGAGGCAGGTTGATGGGGAAGTCAAGGAACAGGATAATGAGATTGAGGAAGAGGAG
AAGAAAGTCAAGGGGTTGTTGAGACGCATTGGGGCTGCTGTTGGGGCGTTGCATAAGGCTGGGGTGGTGCATGGG
GATTTGACGACGAGTAATTTGATCTTGAGAGGTGCGGATGAGGGTGGGGATGGGGATGGGGCTAGTCCTGATATG
CAGGGTGAGGTGGTGCTGATTGATTTTGGATTGGCGAGTCAGAGTATTCAGGATGAGGATCGCGCGGTGGATTTG
TATGTGCTGGAGCGCGCGTTTGGGAGTACGCATCCCCGGACGGAGCCGTTGTTTGGGGAGGTCCTCGAGGGGTAT
CGGGCGAGTTATCGCGGGTCCGGGTCGGTGTTGAAGAGGTTGGAGGATGTGAGGATGAGGGGGAGGAAGAGGAGT
ATGCTTGGTTAG
Transcript >Ani_SJS72_1|g4604.t1
ATGACCCTAATAACCCAAGGCGCCGAAGCTCACCTCTACAAAACGACCTACCTATCACCGACCACCCCCGCGGCA
CTAAAAATCCGCCCGACAAAGCCCTACCGCCACCCGATCCTCGACCGGCGATTGACGCGTGCTCGCGTCCTCCAG
GAAGCGCGGTGCTTGGTGCGTCTTGTGCGCGAGGGGGTGAATGTTCCGGCGGTGTTGGCGGTGGACTGGGATATC
AACAACAAGAACAACAATAATGGGGGTGAGGGAGATGATAATGATGTGAGAGGCAACGGAGCCTGGATCCTCATG
GAATGGATCGAGGGATGTGTGGTACGGGTTGTGATTCAACGGTGGGAGCGGTATATCAAGTCTCGTGCTGGGTCT
GGTTCTGGTGTGGGGGCGAAGAGGCAGGTTGATGGGGAAGTCAAGGAACAGGATAATGAGATTGAGGAAGAGGAG
AAGAAAGTCAAGGGGTTGTTGAGACGCATTGGGGCTGCTGTTGGGGCGTTGCATAAGGCTGGGGTGGTGCATGGG
GATTTGACGACGAGTAATTTGATCTTGAGAGGTGCGGATGAGGGTGGGGATGGGGATGGGGCTAGTCCTGATATG
CAGGGTGAGGTGGTGCTGATTGATTTTGGATTGGCGAGTCAGAGTATTCAGGATGAGGATCGCGCGGTGGATTTG
TATGTGCTGGAGCGCGCGTTTGGGAGTACGCATCCCCGGACGGAGCCGTTGTTTGGGGAGGTCCTCGAGGGGTAT
CGGGCGAGTTATCGCGGGTCCGGGTCGGTGTTGAAGAGGTTGGAGGATGTGAGGATGAGGGGGAGGAAGAGGAGT
ATGCTTGGTTAG
Gene >Ani_SJS72_1|g4604.t1
ATGACCCTAATAACCCAAGGCGCCGAAGCTCACCTCTACAAAACGACCTACCTATCACCGACCACCCCCGCGGCA
CTAAAAATCCGCCCGACAAAGCCCTACCGCCACCCGATCCTCGACCGGCGATTGACGCGTGCTCGCGTCCTCCAG
GAAGCGCGGTGCTTGGTGCGTCTTGTGCGCGAGGGGGTGAATGTTCCGGCGGTGTTGGCGGTGGACTGGGATATC
AACAACAAGAACAACAATAATGGGGGTGAGGGAGATGATAATGATGTGAGAGGCAACGGAGCCTGGATCCTCATG
GAATGGATCGAGGGATGTGTGGTACGGGTTGTGATTCAACGGTGGGAGCGGTATATCAAGTCTCGTGCTGGGTCT
GGTTCTGGTGTGGGGGCGAAGAGGCAGGTTGATGGGGAAGTCAAGGAACAGGATAATGAGATTGAGGAAGAGGAG
AAGAAAGTCAAGGGGTTGTTGAGACGCATTGGGGCTGCTGTTGGGGCGTTGCATAAGGCTGGGGTGGTGCATGGG
GATTTGACGACGAGTAATTTGATCTTGAGAGGTGCGGATGAGGGTGGGGATGGGGATGGGGCTAGTCCTGATATG
CAGGGTGAGGTGGTGCTGATTGATTTTGGATTGGCGAGTCAGAGTATTCAGGATGAGGATCGCGCGGTGGATTTG
TATGTGCTGGAGCGCGCGTTTGGGAGTACGCATCCCCGGACGGAGCCGTTGTTTGGGGAGGTCCTCGAGGGGTAT
CGGGCGAGTTATCGCGGGTCCGGGTCGGTGTTGAAGAGGTTGGAGGATGTGAGGATGAGGGGGAGGAAGAGGAGT
ATGCTTGGTTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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