© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g4597.t1 |
| Gene name | |
| Location | scaffold_029:55765..56962 |
| Strand | + |
| Gene length (bp) | 1197 |
| Transcript length (bp) | 1137 |
| Coding sequence length (bp) | 1137 |
| Protein length (aa) | 379 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF02116 | STE2 | Fungal pheromone mating factor STE2 GPCR | 3.5E-105 | 5 | 281 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0007186 | G protein-coupled receptor signaling pathway | Yes |
| GO:0016020 | membrane | Yes |
| GO:0004932 | mating-type factor pheromone receptor activity | Yes |
| GO:0016503 | pheromone receptor activity | No |
| GO:0008150 | biological_process | No |
| GO:0001653 | peptide receptor activity | No |
| GO:0038023 | signaling receptor activity | No |
| GO:0065007 | biological regulation | No |
| GO:0060089 | molecular transducer activity | No |
| GO:0050794 | regulation of cellular process | No |
| GO:0008528 | G protein-coupled peptide receptor activity | No |
| GO:0003674 | molecular_function | No |
| GO:0009987 | cellular process | No |
| GO:0050789 | regulation of biological process | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0004930 | G protein-coupled receptor activity | No |
| GO:0004888 | transmembrane signaling receptor activity | No |
| GO:0007165 | signal transduction | No |
| GO:0005575 | cellular_component | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 68 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 38 | 60 | 22 |
| 2 | 69 | 91 | 22 |
| 3 | 114 | 136 | 22 |
| 4 | 149 | 171 | 22 |
| 5 | 197 | 219 | 22 |
| 6 | 235 | 257 | 22 |
| 7 | 262 | 284 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g4597.t1 MASTDPFAQNVTFHTGDGTPFEVNVQEIDTFLQYCIQICTNYGAQLGASIVLFVILLLLTRPEKRSSSVFILNCA ALLSNVGRLFCQILYFTTDFVRVYAYFSGDFSRVPTSAYANSVIAVVFYTILVICIEASLVLQVQVICANLGRVY RQVLLSLSIVVALIPVGFRMAMMVENAIAIMAAESSIPLIWLQSAENITATISICFFCAVFVAKLGFAIRQRRRL GVRDFGPMKVIFIMGCQTLVIPATFSIIHYIAAVPALSSNVATLVTISLPLSSIWAGVALTKVSSGAGTGSGTGS GSSGRNLWNVLSFPVWDSRNTTSTTTSSSTPTVNPVSTCYADNGSSKQCKQQTNTEEIGITVEHEISVQSFKREK DMV* |
| Coding | >Ani_SJS72_1|g4597.t1 ATGGCCTCAACTGATCCTTTTGCCCAAAACGTCACCTTCCATACTGGCGATGGAACCCCCTTCGAGGTGAACGTG CAGGAAATTGACACATTCTTGCAGTACTGTATTCAGATCTGCACCAACTATGGCGCCCAGCTCGGAGCTTCCATC GTGCTCTTCGTCATCCTCCTGCTCCTGACCAGACCCGAGAAGCGCAGCTCCAGCGTCTTCATCCTCAATTGCGCT GCACTGCTCTCCAACGTCGGCCGTCTCTTTTGCCAGATCTTGTATTTCACTACCGACTTCGTGAGAGTGTATGCC TACTTCTCCGGAGACTTCTCTCGAGTGCCAACCTCCGCATACGCCAACTCCGTCATCGCAGTGGTATTCTACACC ATCCTCGTGATATGCATCGAGGCCTCGCTCGTCCTGCAGGTCCAGGTCATCTGTGCGAACCTCGGTCGTGTATAC CGACAGGTCCTTCTCTCACTGTCCATCGTGGTTGCACTGATCCCAGTCGGATTCCGTATGGCCATGATGGTCGAG AACGCCATTGCAATCATGGCAGCCGAAAGCAGCATTCCTCTCATCTGGCTTCAAAGTGCAGAGAACATCACCGCC ACAATCAGCATCTGCTTCTTCTGCGCCGTCTTCGTTGCCAAGCTCGGATTTGCCATTCGTCAGCGCCGCAGACTC GGCGTGCGAGACTTTGGCCCAATGAAGGTCATCTTCATTATGGGTTGTCAGACTCTGGTCATTCCAGCCACCTTC TCAATCATCCACTACATCGCCGCCGTCCCGGCTCTATCCTCCAACGTGGCCACCCTAGTCACCATCTCCCTTCCC CTCTCCTCTATCTGGGCTGGTGTCGCCTTGACCAAAGTCTCCTCTGGCGCTGGCACTGGCTCTGGCACCGGATCT GGCTCGTCAGGCCGCAATCTTTGGAACGTGCTCTCCTTCCCTGTCTGGGACAGTAGAAACACTACCAGTACTACT ACCTCTTCCTCGACGCCAACTGTGAATCCAGTCTCAACCTGCTACGCGGACAATGGTTCCTCTAAGCAGTGCAAG CAGCAGACTAACACTGAAGAAATTGGCATTACTGTCGAACATGAGATCTCAGTGCAGAGCTTCAAGAGGGAAAAG GATATGGTTTGA |
| Transcript | >Ani_SJS72_1|g4597.t1 ATGGCCTCAACTGATCCTTTTGCCCAAAACGTCACCTTCCATACTGGCGATGGAACCCCCTTCGAGGTGAACGTG CAGGAAATTGACACATTCTTGCAGTACTGTATTCAGATCTGCACCAACTATGGCGCCCAGCTCGGAGCTTCCATC GTGCTCTTCGTCATCCTCCTGCTCCTGACCAGACCCGAGAAGCGCAGCTCCAGCGTCTTCATCCTCAATTGCGCT GCACTGCTCTCCAACGTCGGCCGTCTCTTTTGCCAGATCTTGTATTTCACTACCGACTTCGTGAGAGTGTATGCC TACTTCTCCGGAGACTTCTCTCGAGTGCCAACCTCCGCATACGCCAACTCCGTCATCGCAGTGGTATTCTACACC ATCCTCGTGATATGCATCGAGGCCTCGCTCGTCCTGCAGGTCCAGGTCATCTGTGCGAACCTCGGTCGTGTATAC CGACAGGTCCTTCTCTCACTGTCCATCGTGGTTGCACTGATCCCAGTCGGATTCCGTATGGCCATGATGGTCGAG AACGCCATTGCAATCATGGCAGCCGAAAGCAGCATTCCTCTCATCTGGCTTCAAAGTGCAGAGAACATCACCGCC ACAATCAGCATCTGCTTCTTCTGCGCCGTCTTCGTTGCCAAGCTCGGATTTGCCATTCGTCAGCGCCGCAGACTC GGCGTGCGAGACTTTGGCCCAATGAAGGTCATCTTCATTATGGGTTGTCAGACTCTGGTCATTCCAGCCACCTTC TCAATCATCCACTACATCGCCGCCGTCCCGGCTCTATCCTCCAACGTGGCCACCCTAGTCACCATCTCCCTTCCC CTCTCCTCTATCTGGGCTGGTGTCGCCTTGACCAAAGTCTCCTCTGGCGCTGGCACTGGCTCTGGCACCGGATCT GGCTCGTCAGGCCGCAATCTTTGGAACGTGCTCTCCTTCCCTGTCTGGGACAGTAGAAACACTACCAGTACTACT ACCTCTTCCTCGACGCCAACTGTGAATCCAGTCTCAACCTGCTACGCGGACAATGGTTCCTCTAAGCAGTGCAAG CAGCAGACTAACACTGAAGAAATTGGCATTACTGTCGAACATGAGATCTCAGTGCAGAGCTTCAAGAGGGAAAAG GATATGGTTTGA |
| Gene | >Ani_SJS72_1|g4597.t1 ATGGCCTCAACTGATCCTTTTGCCCAAAACGTCACCTTCCATACTGGCGATGGAACCCCCTTCGAGGTGAACGTG CAGGAAATTGACACATTCTTGCAGTACTGTATTCAGATCTGCACCAACTATGGCGCCCAGCTCGGAGCTTCCATC GTGCTCTTCGTCATCCTCCTGCTCCTGACCAGACCCGAGAAGCGCAGCTCCAGCGTCTTCATCCTCAATTGCGCT GCACTGCTCTCCAACGTCGGCCGTCTCTTTTGCCAGATCTTGTATTTCACTACCGACTTCGTGAGAGTGTATGCC TACTTCTCCGGAGACTTCTCTCGAGTGCCAACCTCCGCATACGCCAACTCCGTCATCGCAGTGGTATTCTACACC ATCCTCGTGATATGCATCGAGGCCTCGCTCGTCCTGCAGGTCCAGGTCATCTGTGCGAACCTCGGTCGTGTATAC CGACAGGTCCTTCTCTCACTGTCCATCGTGGTTGCACTGATCCCAGTCGGATTCCGTATGGCCATGATGGTCGAG AACGCCATTGCAATCATGGCAGCCGAAAGCAGCATTCCTCTCATCTGGCTTCAAAGTGCAGAGAACATCACCGCC ACAATCAGCATCTGCTTCTTCTGCGCCGTCTTCGTTGCCAAGCTCGGATTTGCCATTCGTCAGCGCCGCAGACTC GGCGTGCGAGACTTTGGCCCAATGAAGGTCATCTTCATTATGGGTTGTCAGACTCTGGTCATTCCAGGTGTGCAA CTCCCTCCCTCCCTCTCTTACCCTCACATATCTAACTGAACCTCGTCCATAGCCACCTTCTCAATCATCCACTAC ATCGCCGCCGTCCCGGCTCTATCCTCCAACGTGGCCACCCTAGTCACCATCTCCCTTCCCCTCTCCTCTATCTGG GCTGGTGTCGCCTTGACCAAAGTCTCCTCTGGCGCTGGCACTGGCTCTGGCACCGGATCTGGCTCGTCAGGCCGC AATCTTTGGAACGTGCTCTCCTTCCCTGTCTGGGACAGTAGAAACACTACCAGTACTACTACCTCTTCCTCGACG CCAACTGTGAATCCAGTCTCAACCTGCTACGCGGACAATGGTTCCTCTAAGCAGTGCAAGCAGCAGACTAACACT GAAGAAATTGGCATTACTGTCGAACATGAGATCTCAGTGCAGAGCTTCAAGAGGGAAAAGGATATGGTTTGA |