Protein ID | Ani_SJS72_1|g4560.t1 |
Gene name | |
Location | scaffold_028:261753..264182 |
Strand | - |
Gene length (bp) | 2429 |
Transcript length (bp) | 2376 |
Coding sequence length (bp) | 2376 |
Protein length (aa) | 792 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF13688 | Reprolysin_5 | Metallo-peptidase family M12 | 3.5E-63 | 274 | 480 |
PF13574 | Reprolysin_2 | Metallo-peptidase family M12B Reprolysin-like | 1.2E-49 | 298 | 492 |
PF13583 | Reprolysin_4 | Metallo-peptidase family M12B Reprolysin-like | 1.5E-48 | 274 | 492 |
PF00200 | Disintegrin | Disintegrin | 7.9E-18 | 521 | 596 |
PF13582 | Reprolysin_3 | Metallo-peptidase family M12B Reprolysin-like | 2.7E-11 | 302 | 436 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
Yes | 1 - 25 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 699 | 721 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS72_1|g4560.t1 MRFLTYSLPFIASAISLFGVNVQARSQAPSAIRHVSTLDQPTIKTPSQRVDHLDHFDITFNIHDKHQRIKLELEP NHDILAEDASVQYLDADGNVRRHEPIARHEHKVFKGRSLLGRGKGMWDPVGWARIYLKQDGSEPLFEGVFSIDGD NHHVQLKSAYMEKKRPVDVDLPDSATDYMIFYRDSDMVRLHTELKRSSLGSTSCQADQLGFNTNPNHPVLQPYGQ AETDTWGAISLNSLFGLNKRQSDIGSVSGNAGGVNLASTIGDTSGCPSTKQVALIGVATDCAFTGSFNNETAAKE WVISTVNSASNVYEKSFNITIGLRNLTITDSSCPDNPPAATAWNMPCSSGNLTSRLDLFSKWRGEQSDDNAYWTL MSDCATGNEVGLSWLGQLCNSDASSDGSSTVSGTNVVVRSSGSDWQIFAHESGHTFGAVHDCDSQTCAEDLEASS QCCPLTSSTCNANGKYIMNPTTGTDITAFSQCTIGNICAALGRNSVKSSCLSANRDVTTYTGSQCGNGIVESGED CDCGGEDGCGDNNCCDAKTCKFKSGAVCDDSNDSCCSSCQFSSAGTVCRASRGDCDVAETCSGNSSTCPTDSFKK DGTSCGSSGSGLACASGQCTSRDYQCRSVMGSLLHSNDTYACSSFSSSCELVCTSPKIGTCYSVNQNFLDGTPCG SGGYCSNGDCKGQNVESWIKNHKGIVIGVACAVGALILLALMTCIVNRCRRARAPKPVPRPVPYGPWPGARPPPP PPMNQWPARGYQGLGNEPPPPYPGVPGQPVPQHMPPQGRYA* |
Coding | >Ani_SJS72_1|g4560.t1 ATGCGGTTTCTCACTTATTCCCTGCCCTTCATTGCAAGTGCTATATCGCTCTTTGGGGTCAATGTACAAGCTCGA TCACAAGCTCCAAGTGCCATCCGTCATGTGTCGACGCTTGACCAGCCCACCATCAAGACACCCTCACAGCGGGTC GATCACCTTGACCACTTTGACATCACCTTCAATATTCATGACAAGCACCAGCGGATAAAGCTGGAGCTGGAGCCC AACCATGACATCCTGGCGGAAGACGCATCCGTACAGTATCTCGACGCGGACGGGAACGTGCGACGGCACGAGCCC ATTGCTCGACATGAGCATAAGGTCTTCAAGGGGAGGAGTCTACTCGGGCGAGGAAAAGGCATGTGGGATCCGGTC GGATGGGCGCGGATCTACTTGAAGCAGGATGGCTCAGAGCCACTATTTGAGGGAGTCTTCAGTATCGACGGCGAC AACCATCACGTTCAGCTGAAATCGGCATACATGGAGAAGAAACGCCCCGTGGATGTCGACCTTCCCGACTCAGCG ACTGACTATATGATCTTCTACCGGGATTCGGATATGGTGCGTCTACATACGGAACTCAAGCGGTCGTCGCTCGGA TCGACCTCGTGTCAAGCCGATCAGCTCGGCTTCAACACTAACCCCAACCACCCTGTGCTACAACCGTATGGCCAG GCAGAGACCGATACGTGGGGAGCAATTTCATTGAACTCCTTGTTTGGACTCAACAAGCGCCAATCCGATATCGGA AGTGTGTCTGGCAATGCGGGCGGAGTCAATCTGGCGTCGACCATTGGTGATACTTCGGGCTGTCCGAGTACGAAG CAAGTAGCTTTGATTGGTGTTGCAACGGACTGCGCCTTTACCGGCTCATTCAACAACGAGACTGCCGCCAAGGAA TGGGTCATCAGTACTGTCAACAGCGCGTCCAATGTCTACGAAAAGTCCTTCAACATTACGATTGGGCTGCGGAAT CTGACTATCACCGACAGCTCATGCCCCGACAACCCGCCCGCGGCCACGGCATGGAACATGCCCTGCTCCAGCGGC AATCTCACCTCCCGACTGGATCTGTTTTCCAAGTGGCGCGGTGAGCAATCGGATGACAATGCTTATTGGACCCTG ATGAGCGATTGCGCGACGGGCAACGAGGTCGGACTGTCATGGCTTGGCCAACTCTGCAATAGCGATGCTTCTTCG GATGGCTCGAGCACGGTCAGTGGAACTAACGTCGTCGTTCGGTCTTCCGGCTCGGATTGGCAGATCTTTGCTCAT GAATCTGGCCACACCTTTGGCGCTGTCCACGACTGTGACTCCCAGACCTGCGCGGAGGATCTCGAAGCCTCGTCC CAGTGCTGTCCGTTGACCTCGAGCACCTGCAACGCCAACGGGAAATACATCATGAATCCTACAACTGGAACAGAC ATCACTGCGTTCTCGCAATGCACTATCGGAAATATATGCGCAGCCCTGGGCCGCAACAGCGTTAAGTCCAGTTGT CTCTCCGCCAACCGCGACGTCACCACCTACACTGGCAGCCAGTGCGGCAACGGAATTGTCGAGTCCGGCGAAGAC TGCGATTGTGGCGGGGAAGATGGTTGCGGCGACAACAACTGCTGCGACGCGAAGACATGCAAGTTCAAGTCGGGA GCTGTGTGTGATGACTCCAACGACAGCTGCTGTTCAAGCTGCCAATTCTCCTCAGCTGGGACGGTATGTCGTGCC AGTCGCGGCGACTGCGACGTGGCAGAGACCTGCAGCGGCAACTCCAGTACTTGTCCTACCGACTCGTTCAAGAAG GACGGCACGAGCTGCGGCAGCAGTGGCTCGGGACTTGCCTGCGCTAGTGGCCAATGCACCAGCCGCGACTACCAG TGCCGCAGTGTGATGGGCAGTCTCCTCCACAGCAACGACACCTACGCCTGTTCCTCCTTCAGTTCCTCCTGCGAA CTGGTCTGCACCTCCCCGAAGATCGGCACGTGCTACAGCGTCAACCAAAACTTCCTCGACGGCACTCCCTGCGGT AGTGGCGGCTACTGCAGCAACGGCGACTGCAAGGGCCAAAACGTCGAATCCTGGATCAAGAACCACAAAGGTATC GTCATTGGTGTCGCCTGCGCCGTAGGCGCCCTGATCCTTTTGGCCCTGATGACCTGCATCGTAAACCGCTGTCGC CGGGCTCGCGCGCCAAAACCCGTCCCGCGTCCAGTGCCTTACGGGCCGTGGCCCGGCGCTAGGCCTCCCCCGCCG CCGCCCATGAACCAGTGGCCGGCGCGAGGCTATCAAGGCTTAGGGAATGAGCCGCCGCCCCCGTATCCAGGTGTA CCTGGTCAGCCAGTACCGCAACATATGCCTCCCCAGGGGCGGTACGCTTGA |
Transcript | >Ani_SJS72_1|g4560.t1 ATGCGGTTTCTCACTTATTCCCTGCCCTTCATTGCAAGTGCTATATCGCTCTTTGGGGTCAATGTACAAGCTCGA TCACAAGCTCCAAGTGCCATCCGTCATGTGTCGACGCTTGACCAGCCCACCATCAAGACACCCTCACAGCGGGTC GATCACCTTGACCACTTTGACATCACCTTCAATATTCATGACAAGCACCAGCGGATAAAGCTGGAGCTGGAGCCC AACCATGACATCCTGGCGGAAGACGCATCCGTACAGTATCTCGACGCGGACGGGAACGTGCGACGGCACGAGCCC ATTGCTCGACATGAGCATAAGGTCTTCAAGGGGAGGAGTCTACTCGGGCGAGGAAAAGGCATGTGGGATCCGGTC GGATGGGCGCGGATCTACTTGAAGCAGGATGGCTCAGAGCCACTATTTGAGGGAGTCTTCAGTATCGACGGCGAC AACCATCACGTTCAGCTGAAATCGGCATACATGGAGAAGAAACGCCCCGTGGATGTCGACCTTCCCGACTCAGCG ACTGACTATATGATCTTCTACCGGGATTCGGATATGGTGCGTCTACATACGGAACTCAAGCGGTCGTCGCTCGGA TCGACCTCGTGTCAAGCCGATCAGCTCGGCTTCAACACTAACCCCAACCACCCTGTGCTACAACCGTATGGCCAG GCAGAGACCGATACGTGGGGAGCAATTTCATTGAACTCCTTGTTTGGACTCAACAAGCGCCAATCCGATATCGGA AGTGTGTCTGGCAATGCGGGCGGAGTCAATCTGGCGTCGACCATTGGTGATACTTCGGGCTGTCCGAGTACGAAG CAAGTAGCTTTGATTGGTGTTGCAACGGACTGCGCCTTTACCGGCTCATTCAACAACGAGACTGCCGCCAAGGAA TGGGTCATCAGTACTGTCAACAGCGCGTCCAATGTCTACGAAAAGTCCTTCAACATTACGATTGGGCTGCGGAAT CTGACTATCACCGACAGCTCATGCCCCGACAACCCGCCCGCGGCCACGGCATGGAACATGCCCTGCTCCAGCGGC AATCTCACCTCCCGACTGGATCTGTTTTCCAAGTGGCGCGGTGAGCAATCGGATGACAATGCTTATTGGACCCTG ATGAGCGATTGCGCGACGGGCAACGAGGTCGGACTGTCATGGCTTGGCCAACTCTGCAATAGCGATGCTTCTTCG GATGGCTCGAGCACGGTCAGTGGAACTAACGTCGTCGTTCGGTCTTCCGGCTCGGATTGGCAGATCTTTGCTCAT GAATCTGGCCACACCTTTGGCGCTGTCCACGACTGTGACTCCCAGACCTGCGCGGAGGATCTCGAAGCCTCGTCC CAGTGCTGTCCGTTGACCTCGAGCACCTGCAACGCCAACGGGAAATACATCATGAATCCTACAACTGGAACAGAC ATCACTGCGTTCTCGCAATGCACTATCGGAAATATATGCGCAGCCCTGGGCCGCAACAGCGTTAAGTCCAGTTGT CTCTCCGCCAACCGCGACGTCACCACCTACACTGGCAGCCAGTGCGGCAACGGAATTGTCGAGTCCGGCGAAGAC TGCGATTGTGGCGGGGAAGATGGTTGCGGCGACAACAACTGCTGCGACGCGAAGACATGCAAGTTCAAGTCGGGA GCTGTGTGTGATGACTCCAACGACAGCTGCTGTTCAAGCTGCCAATTCTCCTCAGCTGGGACGGTATGTCGTGCC AGTCGCGGCGACTGCGACGTGGCAGAGACCTGCAGCGGCAACTCCAGTACTTGTCCTACCGACTCGTTCAAGAAG GACGGCACGAGCTGCGGCAGCAGTGGCTCGGGACTTGCCTGCGCTAGTGGCCAATGCACCAGCCGCGACTACCAG TGCCGCAGTGTGATGGGCAGTCTCCTCCACAGCAACGACACCTACGCCTGTTCCTCCTTCAGTTCCTCCTGCGAA CTGGTCTGCACCTCCCCGAAGATCGGCACGTGCTACAGCGTCAACCAAAACTTCCTCGACGGCACTCCCTGCGGT AGTGGCGGCTACTGCAGCAACGGCGACTGCAAGGGCCAAAACGTCGAATCCTGGATCAAGAACCACAAAGGTATC GTCATTGGTGTCGCCTGCGCCGTAGGCGCCCTGATCCTTTTGGCCCTGATGACCTGCATCGTAAACCGCTGTCGC CGGGCTCGCGCGCCAAAACCCGTCCCGCGTCCAGTGCCTTACGGGCCGTGGCCCGGCGCTAGGCCTCCCCCGCCG CCGCCCATGAACCAGTGGCCGGCGCGAGGCTATCAAGGCTTAGGGAATGAGCCGCCGCCCCCGTATCCAGGTGTA CCTGGTCAGCCAGTACCGCAACATATGCCTCCCCAGGGGCGGTACGCTTGA |
Gene | >Ani_SJS72_1|g4560.t1 ATGCGGTTTCTCACTTATTCCCTGCCCTTCATTGCAAGTGCTATATCGCTCTTTGGGGTCAATGTACAAGGTTAG CTCGGCGACATCCGGCGCATAGATTTCTTCTAACTGGATCAAATACAGCTCGATCACAAGCTCCAAGTGCCATCC GTCATGTGTCGACGCTTGACCAGCCCACCATCAAGACACCCTCACAGCGGGTCGATCACCTTGACCACTTTGACA TCACCTTCAATATTCATGACAAGCACCAGCGGATAAAGCTGGAGCTGGAGCCCAACCATGACATCCTGGCGGAAG ACGCATCCGTACAGTATCTCGACGCGGACGGGAACGTGCGACGGCACGAGCCCATTGCTCGACATGAGCATAAGG TCTTCAAGGGGAGGAGTCTACTCGGGCGAGGAAAAGGCATGTGGGATCCGGTCGGATGGGCGCGGATCTACTTGA AGCAGGATGGCTCAGAGCCACTATTTGAGGGAGTCTTCAGTATCGACGGCGACAACCATCACGTTCAGCTGAAAT CGGCATACATGGAGAAGAAACGCCCCGTGGATGTCGACCTTCCCGACTCAGCGACTGACTATATGATCTTCTACC GGGATTCGGATATGGTGCGTCTACATACGGAACTCAAGCGGTCGTCGCTCGGATCGACCTCGTGTCAAGCCGATC AGCTCGGCTTCAACACTAACCCCAACCACCCTGTGCTACAACCGTATGGCCAGGCAGAGACCGATACGTGGGGAG CAATTTCATTGAACTCCTTGTTTGGACTCAACAAGCGCCAATCCGATATCGGAAGTGTGTCTGGCAATGCGGGCG GAGTCAATCTGGCGTCGACCATTGGTGATACTTCGGGCTGTCCGAGTACGAAGCAAGTAGCTTTGATTGGTGTTG CAACGGACTGCGCCTTTACCGGCTCATTCAACAACGAGACTGCCGCCAAGGAATGGGTCATCAGTACTGTCAACA GCGCGTCCAATGTCTACGAAAAGTCCTTCAACATTACGATTGGGCTGCGGAATCTGACTATCACCGACAGCTCAT GCCCCGACAACCCGCCCGCGGCCACGGCATGGAACATGCCCTGCTCCAGCGGCAATCTCACCTCCCGACTGGATC TGTTTTCCAAGTGGCGCGGTGAGCAATCGGATGACAATGCTTATTGGACCCTGATGAGCGATTGCGCGACGGGCA ACGAGGTCGGACTGTCATGGCTTGGCCAACTCTGCAATAGCGATGCTTCTTCGGATGGCTCGAGCACGGTCAGTG GAACTAACGTCGTCGTTCGGTCTTCCGGCTCGGATTGGCAGATCTTTGCTCATGAATCTGGCCACACCTTTGGCG CTGTCCACGACTGTGACTCCCAGACCTGCGCGGAGGATCTCGAAGCCTCGTCCCAGTGCTGTCCGTTGACCTCGA GCACCTGCAACGCCAACGGGAAATACATCATGAATCCTACAACTGGAACAGACATCACTGCGTTCTCGCAATGCA CTATCGGAAATATATGCGCAGCCCTGGGCCGCAACAGCGTTAAGTCCAGTTGTCTCTCCGCCAACCGCGACGTCA CCACCTACACTGGCAGCCAGTGCGGCAACGGAATTGTCGAGTCCGGCGAAGACTGCGATTGTGGCGGGGAAGATG GTTGCGGCGACAACAACTGCTGCGACGCGAAGACATGCAAGTTCAAGTCGGGAGCTGTGTGTGATGACTCCAACG ACAGCTGCTGTTCAAGCTGCCAATTCTCCTCAGCTGGGACGGTATGTCGTGCCAGTCGCGGCGACTGCGACGTGG CAGAGACCTGCAGCGGCAACTCCAGTACTTGTCCTACCGACTCGTTCAAGAAGGACGGCACGAGCTGCGGCAGCA GTGGCTCGGGACTTGCCTGCGCTAGTGGCCAATGCACCAGCCGCGACTACCAGTGCCGCAGTGTGATGGGCAGTC TCCTCCACAGCAACGACACCTACGCCTGTTCCTCCTTCAGTTCCTCCTGCGAACTGGTCTGCACCTCCCCGAAGA TCGGCACGTGCTACAGCGTCAACCAAAACTTCCTCGACGGCACTCCCTGCGGTAGTGGCGGCTACTGCAGCAACG GCGACTGCAAGGGCCAAAACGTCGAATCCTGGATCAAGAACCACAAAGGTATCGTCATTGGTGTCGCCTGCGCCG TAGGCGCCCTGATCCTTTTGGCCCTGATGACCTGCATCGTAAACCGCTGTCGCCGGGCTCGCGCGCCAAAACCCG TCCCGCGTCCAGTGCCTTACGGGCCGTGGCCCGGCGCTAGGCCTCCCCCGCCGCCGCCCATGAACCAGTGGCCGG CGCGAGGCTATCAAGGCTTAGGGAATGAGCCGCCGCCCCCGTATCCAGGTGTACCTGGTCAGCCAGTACCGCAAC ATATGCCTCCCCAGGGGCGGTACGCTTGA |