Protein ID | Ani_SJS72_1|g4559.t1 |
Gene name | |
Location | scaffold_028:260165..261049 |
Strand | + |
Gene length (bp) | 884 |
Transcript length (bp) | 804 |
Coding sequence length (bp) | 804 |
Protein length (aa) | 268 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF13499 | EF-hand_7 | EF-hand domain pair | 1.1E-09 | 202 | 263 |
PF13833 | EF-hand_8 | EF-hand domain pair | 4.8E-07 | 216 | 262 |
GO Term | Description | Terminal node |
---|---|---|
GO:0005509 | calcium ion binding | Yes |
GO:0003674 | molecular_function | No |
GO:0043169 | cation binding | No |
GO:0043167 | ion binding | No |
GO:0005488 | binding | No |
GO:0046872 | metal ion binding | No |
Orthofinder run ID | 3 |
Orthogroup | 6219 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS72_1|g4559.t1 MASSQPFGTRSYASGKLPDRSINVNALPFSASSFSRHRSLAGAPGAPTAGDFADPKASQQAPGPSQAPPQPPMHS QPQQDTNPLNRLTEEQREEINEAFTLFDLDRDRHLDYHELRVAFRALGFTLPKQELISLLTTYGVPRPQVQQQQQ NPSAGGNPPPPQQQQNRAAATTNPQHPSNLLMPLSAFQAVTALKILERDPRDEILRAFELFDEGGKGYIDLEDLR RVARELGETGLEEEELRAMIEEFDLEGVGGVTREAFVGICWQ* |
Coding | >Ani_SJS72_1|g4559.t1 ATGGCTTCCTCACAACCCTTCGGCACGCGCTCCTACGCCTCGGGCAAACTCCCCGACCGATCTATCAACGTCAAC GCCCTTCCCTTCAGCGCCTCCTCCTTCTCGCGACACCGCAGTCTCGCCGGCGCGCCCGGCGCTCCCACGGCCGGC GACTTCGCCGACCCCAAAGCCAGCCAACAGGCACCAGGTCCATCGCAAGCACCACCGCAACCACCGATGCATTCA CAACCCCAACAAGACACGAATCCCTTGAACCGATTGACAGAAGAGCAACGCGAAGAGATCAACGAAGCTTTCACC CTCTTCGACCTCGACCGTGACCGCCATCTCGACTACCACGAACTCCGCGTCGCTTTCCGCGCATTAGGCTTCACC CTCCCCAAACAAGAGCTCATCTCCCTCCTAACCACCTACGGCGTTCCGCGTCCCCAAGTCCAACAACAACAACAG AACCCTTCCGCAGGCGGCAACCCTCCCCCACCCCAGCAACAACAAAACCGCGCAGCAGCTACTACGAACCCTCAA CACCCGAGTAATCTGCTCATGCCACTATCGGCCTTCCAGGCCGTCACGGCGCTGAAGATACTGGAGCGGGATCCA CGCGACGAGATCCTGCGCGCGTTCGAACTCTTCGATGAAGGTGGAAAGGGGTACATTGATCTGGAAGATTTGAGG CGCGTGGCGAGGGAGTTGGGTGAGACGGGACTCGAGGAGGAGGAACTGAGGGCTATGATTGAGGAGTTTGATTTG GAGGGTGTCGGGGGTGTTACCAGGGAGGCGTTTGTGGGAATTTGTTGGCAGTGA |
Transcript | >Ani_SJS72_1|g4559.t1 ATGGCTTCCTCACAACCCTTCGGCACGCGCTCCTACGCCTCGGGCAAACTCCCCGACCGATCTATCAACGTCAAC GCCCTTCCCTTCAGCGCCTCCTCCTTCTCGCGACACCGCAGTCTCGCCGGCGCGCCCGGCGCTCCCACGGCCGGC GACTTCGCCGACCCCAAAGCCAGCCAACAGGCACCAGGTCCATCGCAAGCACCACCGCAACCACCGATGCATTCA CAACCCCAACAAGACACGAATCCCTTGAACCGATTGACAGAAGAGCAACGCGAAGAGATCAACGAAGCTTTCACC CTCTTCGACCTCGACCGTGACCGCCATCTCGACTACCACGAACTCCGCGTCGCTTTCCGCGCATTAGGCTTCACC CTCCCCAAACAAGAGCTCATCTCCCTCCTAACCACCTACGGCGTTCCGCGTCCCCAAGTCCAACAACAACAACAG AACCCTTCCGCAGGCGGCAACCCTCCCCCACCCCAGCAACAACAAAACCGCGCAGCAGCTACTACGAACCCTCAA CACCCGAGTAATCTGCTCATGCCACTATCGGCCTTCCAGGCCGTCACGGCGCTGAAGATACTGGAGCGGGATCCA CGCGACGAGATCCTGCGCGCGTTCGAACTCTTCGATGAAGGTGGAAAGGGGTACATTGATCTGGAAGATTTGAGG CGCGTGGCGAGGGAGTTGGGTGAGACGGGACTCGAGGAGGAGGAACTGAGGGCTATGATTGAGGAGTTTGATTTG GAGGGTGTCGGGGGTGTTACCAGGGAGGCGTTTGTGGGAATTTGTTGGCAGTGA |
Gene | >Ani_SJS72_1|g4559.t1 ATGGCTTCCTCACAACCCTTCGGCACGCGCTCCTACGCCTCGGGCAAACTCCCCGACCGATCTATCAACGTCAAC GCCCTTCCCTTCAGCGCCTCCTCCTTCTCGCGACACCGCAGTCTCGCCGGCGCGCCCGGCGCTCCCACGGCCGGC GACTTCGCCGACCCCAAAGCCAGCCAACAGGCACCAGGTCCATCGCAAGCACCACCGCAACCACCGATGCATTCA CAACCCCAACAAGACACGAATCCCTTGAACCGATTGACAGAAGAGCAACGCGAAGAGATCAACGAAGCTGTACTG CTCCCTTCTTCCCCTTCCCAACAAACATACACTGCATCTCAAAAGGCAACATACTAAACAGAATCACTAAATAGT TCACCCTCTTCGACCTCGACCGTGACCGCCATCTCGACTACCACGAACTCCGCGTCGCTTTCCGCGCATTAGGCT TCACCCTCCCCAAACAAGAGCTCATCTCCCTCCTAACCACCTACGGCGTTCCGCGTCCCCAAGTCCAACAACAAC AACAGAACCCTTCCGCAGGCGGCAACCCTCCCCCACCCCAGCAACAACAAAACCGCGCAGCAGCTACTACGAACC CTCAACACCCGAGTAATCTGCTCATGCCACTATCGGCCTTCCAGGCCGTCACGGCGCTGAAGATACTGGAGCGGG ATCCACGCGACGAGATCCTGCGCGCGTTCGAACTCTTCGATGAAGGTGGAAAGGGGTACATTGATCTGGAAGATT TGAGGCGCGTGGCGAGGGAGTTGGGTGAGACGGGACTCGAGGAGGAGGAACTGAGGGCTATGATTGAGGAGTTTG ATTTGGAGGGTGTCGGGGGTGTTACCAGGGAGGCGTTTGTGGGAATTTGTTGGCAGTGA |