Protein ID | Ani_SJS72_1|g451.t1 |
Gene name | |
Location | scaffold_002:379057..380932 |
Strand | - |
Gene length (bp) | 1875 |
Transcript length (bp) | 1752 |
Coding sequence length (bp) | 1752 |
Protein length (aa) | 584 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF07662 | Nucleos_tra2_C | Na+ dependent nucleoside transporter C-terminus | 5.8E-74 | 367 | 579 |
PF01773 | Nucleos_tra2_N | Na+ dependent nucleoside transporter N-terminus | 4.1E-25 | 180 | 250 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 31 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 71 | 90 | 19 |
2 | 100 | 122 | 22 |
3 | 143 | 165 | 22 |
4 | 175 | 192 | 17 |
5 | 199 | 221 | 22 |
6 | 261 | 283 | 22 |
7 | 296 | 318 | 22 |
8 | 338 | 360 | 22 |
9 | 429 | 451 | 22 |
10 | 461 | 480 | 19 |
11 | 523 | 545 | 22 |
12 | 560 | 582 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS72_1|g451.t1 MPPACRISKEIADIHAGDPEAPRVDNLGARDVKKTSREEHQGEESDIGEADISRTPQQLYRHCMSRYTKHVAYAG ILILFTGWWVAGLVLHRDDLGWLIPFIVYLAITLRIIFLYLPISVLTRPVFWIWKQTISRLVSYVPPRFRIPGAA SMTITVIVIGCFVSADTPDNTRADRAVSLFGLIVFLFILWLFSRDRKKIVWHTVIVGMLVQFIVALFVLRTQAGY DIFNFISTLAQKLLGFAEQGVDFLIETGWAEKHKGWFIVSVIPAIMFFVSLVQLLYHAGILQWFVRKFATFFFWS MRVSGAEVVVAAASPFIGQGESAMLIRPFVPHLTMAEIHQIMTSGFATIAGSGLIAYIGMGVNPQALVSSCVMSI PASLAASKIRWPENEETLTAGHVTVPEDEEHQAANALHAFANGAWMGIKIAGMITANLLCIISLVGLANGLLTWW GRYLNINDPPLTIQLIMGYICYPVSFLLGVSRNDDLLKVAQLIGMKLVMNEFIAYSALQTDPQYQSLSPRSRLIA TYALCGFANIGSLGNQIGVLAQLAPERAGDVSRVAVSAMITGAISTLMSAAIAGMIAI* |
Coding | >Ani_SJS72_1|g451.t1 ATGCCGCCGGCTTGCAGAATATCGAAAGAGATTGCCGATATTCATGCAGGTGATCCAGAAGCCCCTCGTGTCGAT AATCTCGGTGCTCGAGATGTGAAGAAAACGTCCAGAGAAGAACATCAGGGCGAAGAAAGTGATATCGGAGAAGCC GACATAAGCCGCACCCCACAGCAACTGTATCGCCATTGCATGTCCAGATACACCAAGCATGTGGCATATGCTGGA ATATTGATACTTTTCACAGGTTGGTGGGTCGCGGGGCTGGTCCTTCACCGCGATGACCTGGGATGGCTAATCCCA TTTATCGTCTATCTGGCCATCACTCTGCGCATTATCTTTCTTTATCTTCCCATTTCTGTGCTCACCAGACCGGTC TTCTGGATCTGGAAACAGACCATCTCGCGTCTTGTAAGCTATGTGCCTCCAAGGTTTCGTATACCAGGAGCAGCG TCAATGACAATTACCGTGATCGTGATCGGGTGCTTCGTCTCTGCGGATACACCAGACAACACGCGAGCCGACAGA GCAGTCAGCCTATTCGGCCTGATCGTCTTCTTGTTTATCCTATGGCTCTTCTCTCGGGATCGCAAGAAGATTGTC TGGCATACCGTCATCGTTGGCATGTTGGTTCAATTTATCGTGGCGCTATTCGTCCTGCGGACACAGGCGGGATAC GACATCTTTAACTTCATATCAACCCTAGCTCAGAAGCTACTGGGATTTGCAGAGCAAGGCGTCGATTTCCTCATC GAGACAGGCTGGGCTGAGAAACACAAAGGCTGGTTCATTGTCAGTGTCATCCCTGCGATTATGTTCTTCGTATCT CTTGTGCAGCTCCTATATCACGCTGGTATCTTACAATGGTTCGTTCGCAAATTCGCGACGTTCTTTTTCTGGTCA ATGCGTGTGTCCGGGGCAGAAGTGGTTGTTGCAGCGGCCTCTCCGTTCATCGGGCAGGGGGAATCAGCCATGCTT ATAAGGCCCTTTGTACCGCACCTGACCATGGCTGAAATTCATCAAATCATGACCTCTGGATTTGCCACCATCGCC GGCTCCGGTCTCATCGCATACATCGGCATGGGTGTCAATCCTCAAGCCCTTGTATCTTCCTGCGTCATGAGCATC CCCGCCTCCCTGGCAGCATCCAAGATACGCTGGCCCGAAAACGAGGAAACCCTCACAGCAGGCCATGTCACCGTA CCGGAAGACGAAGAGCATCAAGCCGCAAACGCCCTTCACGCGTTTGCAAATGGCGCCTGGATGGGTATTAAGATC GCCGGCATGATCACCGCCAACCTACTCTGTATCATCTCCCTGGTCGGCCTAGCCAACGGCCTTCTCACCTGGTGG GGACGTTACTTGAATATTAACGATCCTCCTCTGACCATCCAACTCATCATGGGATATATCTGCTACCCCGTTTCC TTTCTCCTTGGGGTTTCCCGTAACGACGACCTCCTGAAAGTAGCGCAGCTAATCGGGATGAAGCTCGTCATGAAC GAATTCATAGCCTACTCAGCTCTTCAGACCGACCCGCAATACCAGTCCTTATCTCCTCGATCAAGACTAATAGCC ACGTACGCGCTCTGCGGATTTGCAAACATCGGCTCCCTGGGAAACCAGATCGGGGTCCTGGCACAATTGGCTCCC GAGCGGGCAGGAGATGTGTCTCGTGTGGCTGTTAGTGCAATGATAACAGGGGCCATTAGCACGCTTATGAGCGCA GCAATTGCCGGAATGATTGCTATCTAG |
Transcript | >Ani_SJS72_1|g451.t1 ATGCCGCCGGCTTGCAGAATATCGAAAGAGATTGCCGATATTCATGCAGGTGATCCAGAAGCCCCTCGTGTCGAT AATCTCGGTGCTCGAGATGTGAAGAAAACGTCCAGAGAAGAACATCAGGGCGAAGAAAGTGATATCGGAGAAGCC GACATAAGCCGCACCCCACAGCAACTGTATCGCCATTGCATGTCCAGATACACCAAGCATGTGGCATATGCTGGA ATATTGATACTTTTCACAGGTTGGTGGGTCGCGGGGCTGGTCCTTCACCGCGATGACCTGGGATGGCTAATCCCA TTTATCGTCTATCTGGCCATCACTCTGCGCATTATCTTTCTTTATCTTCCCATTTCTGTGCTCACCAGACCGGTC TTCTGGATCTGGAAACAGACCATCTCGCGTCTTGTAAGCTATGTGCCTCCAAGGTTTCGTATACCAGGAGCAGCG TCAATGACAATTACCGTGATCGTGATCGGGTGCTTCGTCTCTGCGGATACACCAGACAACACGCGAGCCGACAGA GCAGTCAGCCTATTCGGCCTGATCGTCTTCTTGTTTATCCTATGGCTCTTCTCTCGGGATCGCAAGAAGATTGTC TGGCATACCGTCATCGTTGGCATGTTGGTTCAATTTATCGTGGCGCTATTCGTCCTGCGGACACAGGCGGGATAC GACATCTTTAACTTCATATCAACCCTAGCTCAGAAGCTACTGGGATTTGCAGAGCAAGGCGTCGATTTCCTCATC GAGACAGGCTGGGCTGAGAAACACAAAGGCTGGTTCATTGTCAGTGTCATCCCTGCGATTATGTTCTTCGTATCT CTTGTGCAGCTCCTATATCACGCTGGTATCTTACAATGGTTCGTTCGCAAATTCGCGACGTTCTTTTTCTGGTCA ATGCGTGTGTCCGGGGCAGAAGTGGTTGTTGCAGCGGCCTCTCCGTTCATCGGGCAGGGGGAATCAGCCATGCTT ATAAGGCCCTTTGTACCGCACCTGACCATGGCTGAAATTCATCAAATCATGACCTCTGGATTTGCCACCATCGCC GGCTCCGGTCTCATCGCATACATCGGCATGGGTGTCAATCCTCAAGCCCTTGTATCTTCCTGCGTCATGAGCATC CCCGCCTCCCTGGCAGCATCCAAGATACGCTGGCCCGAAAACGAGGAAACCCTCACAGCAGGCCATGTCACCGTA CCGGAAGACGAAGAGCATCAAGCCGCAAACGCCCTTCACGCGTTTGCAAATGGCGCCTGGATGGGTATTAAGATC GCCGGCATGATCACCGCCAACCTACTCTGTATCATCTCCCTGGTCGGCCTAGCCAACGGCCTTCTCACCTGGTGG GGACGTTACTTGAATATTAACGATCCTCCTCTGACCATCCAACTCATCATGGGATATATCTGCTACCCCGTTTCC TTTCTCCTTGGGGTTTCCCGTAACGACGACCTCCTGAAAGTAGCGCAGCTAATCGGGATGAAGCTCGTCATGAAC GAATTCATAGCCTACTCAGCTCTTCAGACCGACCCGCAATACCAGTCCTTATCTCCTCGATCAAGACTAATAGCC ACGTACGCGCTCTGCGGATTTGCAAACATCGGCTCCCTGGGAAACCAGATCGGGGTCCTGGCACAATTGGCTCCC GAGCGGGCAGGAGATGTGTCTCGTGTGGCTGTTAGTGCAATGATAACAGGGGCCATTAGCACGCTTATGAGCGCA GCAATTGCCGGAATGATTGCTATCTAG |
Gene | >Ani_SJS72_1|g451.t1 ATGCCGCCGGCTTGCAGAATATCGAAAGAGATTGCCGATATTCATGCAGGTGATCCAGAAGCCCCTCGTGTCGAT AATCTCGGTGCTCGAGATGTGAAGAAAACGTCCAGAGAAGAACATCAGGGCGAAGAAAGTGATATCGGAGAAGCC GACATAAGCCGCACCCCACAGCAACTGTATCGCCATTGCATGTCCAGATACACCAAGCATGTGGCATATGCTGGA ATATTGATACTTTTCACAGGGTGAGTCTTTAGTACTAGCTCTTTCATCCCTCAAAGATTCGCAAGCTTACCAACT TATTATCCCCAGTTGGTGGGTCGCGGGGCTGGTCCTTCACCGCGATGACCTGGGATGGCTAATCCCATTTATCGT CTATCTGGCCATCACTCTGCGCATTATCTTTCTTTATCTTCCCATTTCTGTGCTCACCAGACCGGTCTTCTGGAT CTGGAAACAGACCATCTCGCGTCTTGTAAGCTATGTGCCTCCAAGGTTTCGTATACCAGGAGCAGCGTCAATGAC AATTACCGTGATCGTGATCGGGTGCTTCGTCTCTGCGGATACACCAGACAACACGCGAGCCGACAGAGCAGTCAG CCTATTCGGCCTGATCGTCTTCTTGTTTATCCTATGGCTCTTCTCTCGGGATCGCAAGAAGATTGTCTGGCATAC CGTCATCGTTGGCATGTTGGTTCAATTTATCGTGGCGCTATTCGTCCTGCGGACACAGGCGGGATACGACATCTT TAACTTCATATCAACCCTAGCTCAGAAGCTACTGGGATTTGCAGAGCAAGGCGTCGATTTCCTCATCGAGACAGG CTGGGCTGAGAAACACAAAGGCTGGTTCATTGTCAGTGTCATCCCTGCGATTATGTTCTTCGTATCTCTTGTGCA GCTCCTATATCACGCTGGTATCTTACAATGGTTCGTTCGCAAATTCGCGACGTTCTTTTTCTGGTCAATGCGTGT GTCCGGGGCAGAAGTGGTTGTTGCAGCGGCCTCTCCGTTCATCGGGCAGGGGGAATCAGCCATGCTTATAAGGCC CTTTGTACCGCACCTGACCATGGCTGAAATTCATCAAATCATGACCTCTGGATTTGCCACCATCGCCGGCTCCGG TCTCATCGCATACATCGGCATGGGTGTCAATCCTCAAGCCCTTGTATCTTCCTGCGTCATGAGCATCCCCGCCTC CCTGGCAGCATCCAAGATACGCTGGCCCGAAAACGAGGAAACCCTCACAGCAGGCCATGTCACCGTACCGGAAGA CGAAGAGCATCAAGCCGCAAACGCCCTTCACGCGTTTGCAAATGGCGCCTGGATGGGTATTAAGATCGCCGGCAT GATCACCGCCAACCTACTCTGTATCATCTCCCTGGTCGGCCTAGCCAACGGCCTTCTCACCTGGTGGGGACGTTA CTTGAATATTAACGATCCTCCTCTGACCATCCAACTCATCATGGGATATATCTGCTACCCCGTTTCCTTTCTCCT TGGGGTTTCCCGTAACGACGACCTCCTGAAAGTAGCGCAGCTAATCGGGATGAAGCTCGTCATGGTAAGCTCCTT CTGCAATACCCAGAGACCACTCCTAATAAAATGTATAACCGTTAGAACGAATTCATAGCCTACTCAGCTCTTCAG ACCGACCCGCAATACCAGTCCTTATCTCCTCGATCAAGACTAATAGCCACGTACGCGCTCTGCGGATTTGCAAAC ATCGGCTCCCTGGGAAACCAGATCGGGGTCCTGGCACAATTGGCTCCCGAGCGGGCAGGAGATGTGTCTCGTGTG GCTGTTAGTGCAATGATAACAGGGGCCATTAGCACGCTTATGAGCGCAGCAATTGCCGGAATGATTGCTATCTAG |