Protein ID | Ani_SJS72_1|g4486.t1 |
Gene name | |
Location | scaffold_028:11117..12839 |
Strand | - |
Gene length (bp) | 1722 |
Transcript length (bp) | 1722 |
Coding sequence length (bp) | 1722 |
Protein length (aa) | 574 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF12796 | Ank_2 | Ankyrin repeats (3 copies) | 1.8E-12 | 171 | 242 |
PF13637 | Ank_4 | Ankyrin repeats (many copies) | 1.6E-05 | 183 | 225 |
PF13637 | Ank_4 | Ankyrin repeats (many copies) | 9.4E-06 | 213 | 252 |
PF00023 | Ank | Ankyrin repeat | 1.4E-04 | 178 | 210 |
PF00023 | Ank | Ankyrin repeat | 1.5E-03 | 211 | 243 |
PF13606 | Ank_3 | Ankyrin repeat | 3.2E-04 | 211 | 240 |
PF13857 | Ank_5 | Ankyrin repeats (many copies) | 1.3E-08 | 198 | 246 |
GO Term | Description | Terminal node |
---|---|---|
GO:0005515 | protein binding | Yes |
GO:0003674 | molecular_function | No |
GO:0005488 | binding | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 12 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS72_1|g4486.t1 MERPSPEADVIWWDSSSYYVRCPFCEGVHRHTVNWQTGLFRVSDCEKGETYQSCFPINDQGEVAYEIDKKRGRYV NICVSNDSDTEADDNEDEDDVDRLATEMAHKATIAAEREERHLSITRDAKENIIHTIDGEKYFEYRLIYDAITDC FNGKTRAVQGYLKTSSETELFVRGQFPDGKTMLISAASEKTPEMLSLLIEHGADVNAVDNHGRSALMEAALFGRV GNVKVLLEHGADPNIRDDENRRAVYFARESRKNREERNFRTQDTYEMLVGRQEIVRLLSGEIPKSKNAFGKPPTP SLSRSYRFLSSNGGYTKVLHGPIEEYPMTKCGKTVARLERGGKFPSVGAMSGWSHTPAQPLRVDGRQWTDDVFYI AEIVGHHLASHACDQGICGQYNACHAEKQLIAYFIDRHVFLPRDGLPDPKLEEEITRVEDELERITSCTEIGRVV ASLRKEKQELDDELFDGDEKLVGKDDEIKKLESKRRDVKTALNQLIASPRARRLRMLECKLEILGVQRQRHEDLI EMAEAPPPPASLSEAAILVSSVPCDDCKAFTERVNKHFGLCIQLFASV* |
Coding | >Ani_SJS72_1|g4486.t1 ATGGAGAGACCCTCCCCTGAAGCCGATGTTATCTGGTGGGACTCGAGTTCGTACTACGTACGATGTCCGTTCTGC GAAGGGGTTCATCGGCATACCGTAAACTGGCAGACCGGTCTGTTTAGAGTATCAGATTGCGAGAAAGGGGAAACT TACCAATCCTGCTTTCCCATTAATGATCAAGGGGAGGTCGCGTATGAGATTGATAAGAAACGTGGGCGATATGTC AATATTTGTGTATCGAACGATAGCGATACTGAGGCCGATGACAATGAGGACGAAGACGACGTTGATCGCCTGGCA ACTGAAATGGCTCATAAGGCTACTATCGCAGCAGAGAGGGAAGAACGTCATCTGAGTATCACCAGGGACGCTAAA GAAAATATTATCCACACTATAGATGGTGAAAAATATTTCGAATATAGACTGATCTATGACGCCATCACAGACTGC TTCAATGGCAAAACAAGAGCGGTGCAGGGATATTTGAAGACGTCTAGTGAGACTGAGTTGTTTGTTCGGGGACAA TTCCCCGATGGTAAAACAATGCTTATCTCTGCGGCGTCAGAAAAGACCCCAGAAATGCTGTCACTTCTCATCGAA CACGGGGCTGACGTGAATGCCGTTGACAATCATGGAAGGAGTGCTCTCATGGAGGCAGCGCTTTTTGGTCGGGTT GGCAATGTGAAGGTTCTCCTCGAACACGGTGCAGACCCAAATATCCGGGATGACGAGAATCGACGGGCAGTTTAC TTTGCTCGAGAGTCTCGCAAAAATCGAGAAGAGAGAAATTTTCGTACCCAGGACACTTACGAAATGCTTGTTGGC CGCCAAGAGATTGTACGCCTTCTCAGTGGAGAGATTCCAAAGTCAAAGAATGCTTTTGGCAAACCTCCCACACCA TCGCTCTCTCGGTCCTACCGTTTTCTATCCTCCAACGGTGGATATACGAAGGTATTACATGGACCAATCGAAGAG TATCCAATGACGAAATGCGGGAAAACAGTGGCGCGACTGGAACGAGGAGGGAAATTCCCGTCTGTTGGTGCGATG AGCGGATGGTCACATACTCCTGCGCAACCACTAAGAGTCGACGGTCGTCAGTGGACAGATGATGTCTTTTACATC GCGGAAATAGTGGGCCACCATTTGGCTTCCCATGCTTGTGATCAGGGTATATGCGGTCAGTACAATGCATGCCAC GCAGAAAAACAGTTGATAGCATATTTCATTGATCGCCATGTTTTCCTTCCACGCGATGGCCTCCCAGATCCGAAA TTAGAGGAGGAGATCACTAGGGTAGAGGATGAGCTGGAAAGGATAACTTCATGCACGGAAATAGGACGCGTGGTG GCTTCTCTACGGAAGGAGAAGCAGGAACTCGATGATGAGCTTTTTGATGGAGATGAGAAGCTAGTCGGAAAAGAT GATGAGATCAAGAAACTGGAGTCAAAACGCAGGGATGTTAAAACCGCACTAAATCAGCTTATTGCTAGTCCTCGC GCGCGACGATTACGGATGCTAGAATGCAAGCTGGAGATACTAGGTGTGCAGCGACAGAGACATGAAGACCTGATC GAAATGGCTGAGGCACCACCGCCACCGGCTTCACTATCCGAAGCGGCCATATTGGTCAGTTCAGTTCCTTGCGAT GACTGCAAAGCGTTCACGGAAAGAGTCAACAAGCACTTTGGATTATGTATACAGTTATTCGCATCAGTTTGA |
Transcript | >Ani_SJS72_1|g4486.t1 ATGGAGAGACCCTCCCCTGAAGCCGATGTTATCTGGTGGGACTCGAGTTCGTACTACGTACGATGTCCGTTCTGC GAAGGGGTTCATCGGCATACCGTAAACTGGCAGACCGGTCTGTTTAGAGTATCAGATTGCGAGAAAGGGGAAACT TACCAATCCTGCTTTCCCATTAATGATCAAGGGGAGGTCGCGTATGAGATTGATAAGAAACGTGGGCGATATGTC AATATTTGTGTATCGAACGATAGCGATACTGAGGCCGATGACAATGAGGACGAAGACGACGTTGATCGCCTGGCA ACTGAAATGGCTCATAAGGCTACTATCGCAGCAGAGAGGGAAGAACGTCATCTGAGTATCACCAGGGACGCTAAA GAAAATATTATCCACACTATAGATGGTGAAAAATATTTCGAATATAGACTGATCTATGACGCCATCACAGACTGC TTCAATGGCAAAACAAGAGCGGTGCAGGGATATTTGAAGACGTCTAGTGAGACTGAGTTGTTTGTTCGGGGACAA TTCCCCGATGGTAAAACAATGCTTATCTCTGCGGCGTCAGAAAAGACCCCAGAAATGCTGTCACTTCTCATCGAA CACGGGGCTGACGTGAATGCCGTTGACAATCATGGAAGGAGTGCTCTCATGGAGGCAGCGCTTTTTGGTCGGGTT GGCAATGTGAAGGTTCTCCTCGAACACGGTGCAGACCCAAATATCCGGGATGACGAGAATCGACGGGCAGTTTAC TTTGCTCGAGAGTCTCGCAAAAATCGAGAAGAGAGAAATTTTCGTACCCAGGACACTTACGAAATGCTTGTTGGC CGCCAAGAGATTGTACGCCTTCTCAGTGGAGAGATTCCAAAGTCAAAGAATGCTTTTGGCAAACCTCCCACACCA TCGCTCTCTCGGTCCTACCGTTTTCTATCCTCCAACGGTGGATATACGAAGGTATTACATGGACCAATCGAAGAG TATCCAATGACGAAATGCGGGAAAACAGTGGCGCGACTGGAACGAGGAGGGAAATTCCCGTCTGTTGGTGCGATG AGCGGATGGTCACATACTCCTGCGCAACCACTAAGAGTCGACGGTCGTCAGTGGACAGATGATGTCTTTTACATC GCGGAAATAGTGGGCCACCATTTGGCTTCCCATGCTTGTGATCAGGGTATATGCGGTCAGTACAATGCATGCCAC GCAGAAAAACAGTTGATAGCATATTTCATTGATCGCCATGTTTTCCTTCCACGCGATGGCCTCCCAGATCCGAAA TTAGAGGAGGAGATCACTAGGGTAGAGGATGAGCTGGAAAGGATAACTTCATGCACGGAAATAGGACGCGTGGTG GCTTCTCTACGGAAGGAGAAGCAGGAACTCGATGATGAGCTTTTTGATGGAGATGAGAAGCTAGTCGGAAAAGAT GATGAGATCAAGAAACTGGAGTCAAAACGCAGGGATGTTAAAACCGCACTAAATCAGCTTATTGCTAGTCCTCGC GCGCGACGATTACGGATGCTAGAATGCAAGCTGGAGATACTAGGTGTGCAGCGACAGAGACATGAAGACCTGATC GAAATGGCTGAGGCACCACCGCCACCGGCTTCACTATCCGAAGCGGCCATATTGGTCAGTTCAGTTCCTTGCGAT GACTGCAAAGCGTTCACGGAAAGAGTCAACAAGCACTTTGGATTATGTATACAGTTATTCGCATCAGTTTGA |
Gene | >Ani_SJS72_1|g4486.t1 ATGGAGAGACCCTCCCCTGAAGCCGATGTTATCTGGTGGGACTCGAGTTCGTACTACGTACGATGTCCGTTCTGC GAAGGGGTTCATCGGCATACCGTAAACTGGCAGACCGGTCTGTTTAGAGTATCAGATTGCGAGAAAGGGGAAACT TACCAATCCTGCTTTCCCATTAATGATCAAGGGGAGGTCGCGTATGAGATTGATAAGAAACGTGGGCGATATGTC AATATTTGTGTATCGAACGATAGCGATACTGAGGCCGATGACAATGAGGACGAAGACGACGTTGATCGCCTGGCA ACTGAAATGGCTCATAAGGCTACTATCGCAGCAGAGAGGGAAGAACGTCATCTGAGTATCACCAGGGACGCTAAA GAAAATATTATCCACACTATAGATGGTGAAAAATATTTCGAATATAGACTGATCTATGACGCCATCACAGACTGC TTCAATGGCAAAACAAGAGCGGTGCAGGGATATTTGAAGACGTCTAGTGAGACTGAGTTGTTTGTTCGGGGACAA TTCCCCGATGGTAAAACAATGCTTATCTCTGCGGCGTCAGAAAAGACCCCAGAAATGCTGTCACTTCTCATCGAA CACGGGGCTGACGTGAATGCCGTTGACAATCATGGAAGGAGTGCTCTCATGGAGGCAGCGCTTTTTGGTCGGGTT GGCAATGTGAAGGTTCTCCTCGAACACGGTGCAGACCCAAATATCCGGGATGACGAGAATCGACGGGCAGTTTAC TTTGCTCGAGAGTCTCGCAAAAATCGAGAAGAGAGAAATTTTCGTACCCAGGACACTTACGAAATGCTTGTTGGC CGCCAAGAGATTGTACGCCTTCTCAGTGGAGAGATTCCAAAGTCAAAGAATGCTTTTGGCAAACCTCCCACACCA TCGCTCTCTCGGTCCTACCGTTTTCTATCCTCCAACGGTGGATATACGAAGGTATTACATGGACCAATCGAAGAG TATCCAATGACGAAATGCGGGAAAACAGTGGCGCGACTGGAACGAGGAGGGAAATTCCCGTCTGTTGGTGCGATG AGCGGATGGTCACATACTCCTGCGCAACCACTAAGAGTCGACGGTCGTCAGTGGACAGATGATGTCTTTTACATC GCGGAAATAGTGGGCCACCATTTGGCTTCCCATGCTTGTGATCAGGGTATATGCGGTCAGTACAATGCATGCCAC GCAGAAAAACAGTTGATAGCATATTTCATTGATCGCCATGTTTTCCTTCCACGCGATGGCCTCCCAGATCCGAAA TTAGAGGAGGAGATCACTAGGGTAGAGGATGAGCTGGAAAGGATAACTTCATGCACGGAAATAGGACGCGTGGTG GCTTCTCTACGGAAGGAGAAGCAGGAACTCGATGATGAGCTTTTTGATGGAGATGAGAAGCTAGTCGGAAAAGAT GATGAGATCAAGAAACTGGAGTCAAAACGCAGGGATGTTAAAACCGCACTAAATCAGCTTATTGCTAGTCCTCGC GCGCGACGATTACGGATGCTAGAATGCAAGCTGGAGATACTAGGTGTGCAGCGACAGAGACATGAAGACCTGATC GAAATGGCTGAGGCACCACCGCCACCGGCTTCACTATCCGAAGCGGCCATATTGGTCAGTTCAGTTCCTTGCGAT GACTGCAAAGCGTTCACGGAAAGAGTCAACAAGCACTTTGGATTATGTATACAGTTATTCGCATCAGTTTGA |