Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS72_1|g4485.t1
Gene name
Locationscaffold_028:9698..10348
Strand+
Gene length (bp)650
Transcript length (bp)588
Coding sequence length (bp)588
Protein length (aa) 196

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00857 Isochorismatase Isochorismatase family 6.8E-23 4 165

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 17 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS72_1|g4485.t1
MPRTAIFVIDIQNHLAVDSTSRVPQADRVIKASEEILQTARSITDSNGNSSSPLIVFIQHEESPNDGALVKGTEP
WELVFHPRADAEGEILVAKKTGDTFKSNRDLAQRLRNANVTEIVAFGLQSDACVEATCTGALAAGFHVTVLAGAH
STYDADGKTAQEIEREVELRLSTRGARVVRWEKAIAKWAEKQQVV*
Coding >Ani_SJS72_1|g4485.t1
ATGCCTCGAACTGCTATCTTCGTCATCGACATCCAGAACCACCTGGCCGTTGATTCAACCTCTCGCGTCCCTCAA
GCGGATCGCGTCATCAAAGCCTCTGAAGAGATTCTACAGACAGCTCGGTCCATCACCGACTCCAATGGAAACAGC
AGCAGTCCACTCATTGTTTTTATTCAGCACGAAGAGTCTCCGAATGATGGAGCTCTGGTAAAGGGGACTGAGCCC
TGGGAGCTCGTCTTTCATCCTCGCGCGGACGCAGAGGGTGAAATTTTGGTAGCGAAGAAGACAGGTGACACATTC
AAATCCAACCGCGACCTCGCGCAGAGGCTGCGCAACGCCAACGTCACCGAAATCGTCGCGTTCGGCCTGCAGAGC
GATGCCTGCGTCGAAGCAACATGTACCGGCGCGCTGGCAGCAGGTTTCCACGTAACTGTACTGGCAGGCGCACAT
TCTACCTACGACGCCGATGGAAAGACCGCCCAGGAAATCGAGCGTGAAGTCGAACTTCGCCTCTCGACACGCGGC
GCTCGTGTTGTCCGGTGGGAGAAGGCGATCGCGAAATGGGCGGAGAAGCAACAGGTTGTCTGA
Transcript >Ani_SJS72_1|g4485.t1
ATGCCTCGAACTGCTATCTTCGTCATCGACATCCAGAACCACCTGGCCGTTGATTCAACCTCTCGCGTCCCTCAA
GCGGATCGCGTCATCAAAGCCTCTGAAGAGATTCTACAGACAGCTCGGTCCATCACCGACTCCAATGGAAACAGC
AGCAGTCCACTCATTGTTTTTATTCAGCACGAAGAGTCTCCGAATGATGGAGCTCTGGTAAAGGGGACTGAGCCC
TGGGAGCTCGTCTTTCATCCTCGCGCGGACGCAGAGGGTGAAATTTTGGTAGCGAAGAAGACAGGTGACACATTC
AAATCCAACCGCGACCTCGCGCAGAGGCTGCGCAACGCCAACGTCACCGAAATCGTCGCGTTCGGCCTGCAGAGC
GATGCCTGCGTCGAAGCAACATGTACCGGCGCGCTGGCAGCAGGTTTCCACGTAACTGTACTGGCAGGCGCACAT
TCTACCTACGACGCCGATGGAAAGACCGCCCAGGAAATCGAGCGTGAAGTCGAACTTCGCCTCTCGACACGCGGC
GCTCGTGTTGTCCGGTGGGAGAAGGCGATCGCGAAATGGGCGGAGAAGCAACAGGTTGTCTGA
Gene >Ani_SJS72_1|g4485.t1
ATGCCTCGAACTGCTATCTTCGTCATCGACATCCAGAACCACCTGGCCGTTGATTCAACCTCTCGCGTCCCTCAA
GCGGATCGCGTCATCAAAGCCTCTGAAGAGATTCTACAGACAGCTCGGTCCATCACCGACTCCAATGGAAACAGC
AGCAGTCCACTCATTGTTTTTATTCAGCACGAAGAGTCTCCGAATGATGGAGCTCTGGTAAAGGGGACTGAGCCC
TGGGAGCTCGTCTTTCATCCTCGCGCGGACGCAGAGGGTGAAATTTTGGTAGCGAAGAAGACAGGTACAGTACTC
AACATGCTCGATGAGAATCGATCTAGCTAATCATCTCGTTACATTTTACAGGTGACACATTCAAATCCAACCGCG
ACCTCGCGCAGAGGCTGCGCAACGCCAACGTCACCGAAATCGTCGCGTTCGGCCTGCAGAGCGATGCCTGCGTCG
AAGCAACATGTACCGGCGCGCTGGCAGCAGGTTTCCACGTAACTGTACTGGCAGGCGCACATTCTACCTACGACG
CCGATGGAAAGACCGCCCAGGAAATCGAGCGTGAAGTCGAACTTCGCCTCTCGACACGCGGCGCTCGTGTTGTCC
GGTGGGAGAAGGCGATCGCGAAATGGGCGGAGAAGCAACAGGTTGTCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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