Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS72_1|g4474.t1
Gene name
Locationscaffold_027:314321..315200
Strand+
Gene length (bp)879
Transcript length (bp)879
Coding sequence length (bp)879
Protein length (aa) 293

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05721 PhyH Phytanoyl-CoA dioxygenase (PhyH) 2.8E-15 39 234

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 18 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS72_1|g4474.t1
MENATMTTPQLVQITLSDEERATKTLSSHNLQAALEGLHRDGVCVIINGVDPIHLDKLNDRMVPEAKTLYANPQT
HRNFGSRTGNIQQEPVVDSSYMFEDVIANPWATAITECMLGPNPHLRFYSANTAFKAEDRQPVHVDVHFDFPKMP
FGLCININLVATSPENGATELWPGSHRDADPRDSDDTGVIPEIVEARRRVSPPVQPSLPKGAIIIRDFRLWHAGM
PNRTDDPRVMLVTIHFPAWYRTDLKVVLPRSLQGKVDWGHLVPCVEWVDEDYDYLKGRHDHDFTLQP*
Coding >Ani_SJS72_1|g4474.t1
ATGGAGAACGCCACCATGACAACCCCGCAGCTGGTTCAAATTACACTCTCGGACGAGGAACGCGCTACTAAGACT
CTCTCTTCTCATAACCTTCAAGCAGCTCTTGAGGGTCTCCATCGGGATGGCGTATGTGTCATTATTAACGGCGTT
GACCCTATTCATCTCGATAAGCTGAACGATCGCATGGTCCCCGAGGCCAAGACCCTGTATGCCAATCCACAAACC
CACCGCAACTTTGGCTCTCGTACCGGAAACATCCAGCAAGAGCCTGTTGTCGACTCGAGCTATATGTTTGAGGAC
GTTATTGCAAACCCCTGGGCAACTGCCATCACCGAATGCATGCTGGGACCCAACCCACACCTGCGTTTCTATAGC
GCCAACACGGCCTTCAAAGCTGAAGACCGACAACCGGTGCATGTAGACGTGCACTTTGACTTCCCCAAGATGCCA
TTTGGACTATGTATCAATATAAACCTGGTGGCGACCTCTCCGGAAAATGGCGCTACTGAGCTCTGGCCTGGTAGC
CACCGGGACGCCGATCCTCGAGACAGTGACGACACCGGTGTGATCCCGGAGATCGTTGAAGCACGGCGCAGGGTT
TCTCCCCCAGTGCAGCCATCGCTACCCAAGGGAGCGATTATTATTCGGGATTTCCGGCTGTGGCATGCAGGCATG
CCGAACCGCACGGATGACCCGCGTGTTATGCTCGTGACAATTCATTTCCCGGCGTGGTATCGTACAGACTTAAAG
GTCGTGTTACCTCGGAGCTTGCAGGGAAAGGTGGACTGGGGTCATCTAGTGCCGTGCGTTGAGTGGGTGGACGAG
GACTATGACTATTTGAAGGGCCGGCATGACCATGACTTTACATTGCAGCCATAG
Transcript >Ani_SJS72_1|g4474.t1
ATGGAGAACGCCACCATGACAACCCCGCAGCTGGTTCAAATTACACTCTCGGACGAGGAACGCGCTACTAAGACT
CTCTCTTCTCATAACCTTCAAGCAGCTCTTGAGGGTCTCCATCGGGATGGCGTATGTGTCATTATTAACGGCGTT
GACCCTATTCATCTCGATAAGCTGAACGATCGCATGGTCCCCGAGGCCAAGACCCTGTATGCCAATCCACAAACC
CACCGCAACTTTGGCTCTCGTACCGGAAACATCCAGCAAGAGCCTGTTGTCGACTCGAGCTATATGTTTGAGGAC
GTTATTGCAAACCCCTGGGCAACTGCCATCACCGAATGCATGCTGGGACCCAACCCACACCTGCGTTTCTATAGC
GCCAACACGGCCTTCAAAGCTGAAGACCGACAACCGGTGCATGTAGACGTGCACTTTGACTTCCCCAAGATGCCA
TTTGGACTATGTATCAATATAAACCTGGTGGCGACCTCTCCGGAAAATGGCGCTACTGAGCTCTGGCCTGGTAGC
CACCGGGACGCCGATCCTCGAGACAGTGACGACACCGGTGTGATCCCGGAGATCGTTGAAGCACGGCGCAGGGTT
TCTCCCCCAGTGCAGCCATCGCTACCCAAGGGAGCGATTATTATTCGGGATTTCCGGCTGTGGCATGCAGGCATG
CCGAACCGCACGGATGACCCGCGTGTTATGCTCGTGACAATTCATTTCCCGGCGTGGTATCGTACAGACTTAAAG
GTCGTGTTACCTCGGAGCTTGCAGGGAAAGGTGGACTGGGGTCATCTAGTGCCGTGCGTTGAGTGGGTGGACGAG
GACTATGACTATTTGAAGGGCCGGCATGACCATGACTTTACATTGCAGCCATAG
Gene >Ani_SJS72_1|g4474.t1
ATGGAGAACGCCACCATGACAACCCCGCAGCTGGTTCAAATTACACTCTCGGACGAGGAACGCGCTACTAAGACT
CTCTCTTCTCATAACCTTCAAGCAGCTCTTGAGGGTCTCCATCGGGATGGCGTATGTGTCATTATTAACGGCGTT
GACCCTATTCATCTCGATAAGCTGAACGATCGCATGGTCCCCGAGGCCAAGACCCTGTATGCCAATCCACAAACC
CACCGCAACTTTGGCTCTCGTACCGGAAACATCCAGCAAGAGCCTGTTGTCGACTCGAGCTATATGTTTGAGGAC
GTTATTGCAAACCCCTGGGCAACTGCCATCACCGAATGCATGCTGGGACCCAACCCACACCTGCGTTTCTATAGC
GCCAACACGGCCTTCAAAGCTGAAGACCGACAACCGGTGCATGTAGACGTGCACTTTGACTTCCCCAAGATGCCA
TTTGGACTATGTATCAATATAAACCTGGTGGCGACCTCTCCGGAAAATGGCGCTACTGAGCTCTGGCCTGGTAGC
CACCGGGACGCCGATCCTCGAGACAGTGACGACACCGGTGTGATCCCGGAGATCGTTGAAGCACGGCGCAGGGTT
TCTCCCCCAGTGCAGCCATCGCTACCCAAGGGAGCGATTATTATTCGGGATTTCCGGCTGTGGCATGCAGGCATG
CCGAACCGCACGGATGACCCGCGTGTTATGCTCGTGACAATTCATTTCCCGGCGTGGTATCGTACAGACTTAAAG
GTCGTGTTACCTCGGAGCTTGCAGGGAAAGGTGGACTGGGGTCATCTAGTGCCGTGCGTTGAGTGGGTGGACGAG
GACTATGACTATTTGAAGGGCCGGCATGACCATGACTTTACATTGCAGCCATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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