© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g4460.t1 |
| Gene name | |
| Location | scaffold_027:263634..265566 |
| Strand | - |
| Gene length (bp) | 1932 |
| Transcript length (bp) | 1560 |
| Coding sequence length (bp) | 1560 |
| Protein length (aa) | 520 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00324 | AA_permease | Amino acid permease | 5.9E-30 | 44 | 146 |
| PF00324 | AA_permease | Amino acid permease | 2.0E-77 | 144 | 460 |
| PF13520 | AA_permease_2 | Amino acid permease | 1.0E-25 | 147 | 442 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016020 | membrane | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0009987 | cellular process | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005215 | transporter activity | No |
| GO:0005575 | cellular_component | No |
| GO:0003674 | molecular_function | No |
| GO:0006810 | transport | No |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 33 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 47 | 69 | 22 |
| 2 | 79 | 101 | 22 |
| 3 | 149 | 171 | 22 |
| 4 | 186 | 208 | 22 |
| 5 | 233 | 252 | 19 |
| 6 | 267 | 289 | 22 |
| 7 | 329 | 351 | 22 |
| 8 | 356 | 378 | 22 |
| 9 | 399 | 421 | 22 |
| 10 | 431 | 453 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g4460.t1 MAPGEPIAERNAKDPSTLATDYLEPGAPYVNANKLARKLSPRQVQMIAIGGTIGTGLFLGTGKALATGGPASMLI SYTICGVIVFITMLSLGEMAAFIPVAGSFCTFAGRFVDDALGFALTWNYWFNDAVSTASDIIALQLLLEFMASLL KVVTIIIFIILGIVVNCGANTQHKYIGNKYFYTGEAPFVGGIGGFASVFVTASFAYGGTESIAITAGETKDPAKN LPRVVRNVFWRIILFYIVSIVLIGLDVPYNYPNLSSETTATSPFTIVFVEAGSAVAGSFINAVIMTSVISAANHA LFAGSRLLYTLAVDGYAPRFFGHLNRFQVPWVAVLATSVISGLCFGASYIGAGQLWSWLQNIVGVSNQLSWTFIG LASLRFRAAIRKQNLEHLLPYKNWTYPVGPVLAIGLNIILILVQGWSCFSPHFKAVDFVSYYIELPIMLVMFLVW KLVKRTKLVKLEVMDLVTDRYNLEVVGGREVEEDDGDGSNNGEGDGDGGWRSEKGVVGKVKKVGMWLFL* |
| Coding | >Ani_SJS72_1|g4460.t1 ATGGCTCCTGGCGAGCCCATAGCTGAGCGTAATGCCAAGGACCCCAGCACCTTAGCAACCGATTATCTGGAGCCA GGGGCTCCCTATGTCAATGCGAATAAGCTGGCTCGGAAGCTCTCTCCCCGCCAGGTGCAGATGATCGCCATCGGC GGCACCATTGGTACGGGTCTGTTCCTGGGAACGGGTAAGGCGCTGGCCACCGGTGGGCCGGCCTCGATGCTGATC TCTTATACGATCTGTGGTGTGATTGTATTCATTACTATGTTGTCGCTGGGTGAGATGGCGGCGTTTATCCCTGTT GCCGGGTCGTTCTGTACCTTTGCTGGTCGGTTCGTTGATGATGCTTTGGGCTTTGCTCTTACCTGGAACTACTGG TTCAATGATGCGGTGTCAACTGCGTCGGATATTATTGCGCTGCAGTTGCTGCTGGAGTTTATGGCGAGTCTTCTC AAAGTGGTGACTATCATCATCTTCATCATCCTCGGTATTGTTGTAAACTGCGGCGCAAACACCCAACACAAATAT ATCGGAAACAAGTACTTTTACACTGGAGAGGCCCCCTTCGTCGGAGGTATTGGCGGCTTCGCCTCTGTCTTCGTC ACAGCCTCTTTCGCCTACGGCGGCACCGAATCCATCGCCATCACCGCCGGTGAAACCAAAGACCCCGCTAAGAAT CTCCCCCGTGTCGTCCGCAACGTCTTCTGGCGTATCATCCTCTTCTACATCGTCTCAATCGTCCTCATCGGCCTC GACGTCCCCTACAACTACCCGAACCTATCCTCCGAAACTACCGCCACGAGTCCCTTCACCATCGTCTTCGTTGAA GCCGGCAGCGCCGTCGCCGGCAGTTTCATCAACGCCGTAATCATGACCAGCGTCATCTCCGCCGCCAACCACGCC CTCTTCGCCGGCTCTCGACTTCTCTACACCCTCGCCGTAGACGGCTACGCCCCCCGCTTCTTCGGCCACCTGAAC CGATTCCAAGTCCCCTGGGTAGCGGTCCTCGCTACCTCTGTTATCAGTGGCCTCTGCTTCGGAGCGAGCTACATT GGCGCCGGCCAGTTATGGTCGTGGCTGCAGAATATCGTCGGTGTCTCCAACCAACTCTCCTGGACCTTTATCGGT CTCGCCTCCCTCCGCTTCCGCGCCGCAATCCGCAAACAGAACCTGGAACATCTCCTTCCCTACAAGAACTGGACG TATCCCGTGGGACCGGTTCTTGCCATAGGACTGAATATCATTCTGATTCTGGTTCAGGGTTGGTCGTGCTTTAGC CCGCATTTCAAGGCCGTGGATTTCGTCTCGTATTATATCGAGTTGCCGATCATGCTGGTGATGTTCTTGGTGTGG AAGTTGGTGAAGAGGACGAAGTTGGTGAAATTGGAGGTTATGGATTTGGTTACCGATCGATATAATCTGGAGGTT GTTGGGGGGAGGGAGGTGGAGGAAGATGATGGGGACGGTAGTAATAATGGGGAGGGTGATGGGGATGGGGGATGG AGGAGTGAGAAGGGGGTTGTGGGGAAGGTGAAGAAGGTGGGGATGTGGTTGTTTCTGTGA |
| Transcript | >Ani_SJS72_1|g4460.t1 ATGGCTCCTGGCGAGCCCATAGCTGAGCGTAATGCCAAGGACCCCAGCACCTTAGCAACCGATTATCTGGAGCCA GGGGCTCCCTATGTCAATGCGAATAAGCTGGCTCGGAAGCTCTCTCCCCGCCAGGTGCAGATGATCGCCATCGGC GGCACCATTGGTACGGGTCTGTTCCTGGGAACGGGTAAGGCGCTGGCCACCGGTGGGCCGGCCTCGATGCTGATC TCTTATACGATCTGTGGTGTGATTGTATTCATTACTATGTTGTCGCTGGGTGAGATGGCGGCGTTTATCCCTGTT GCCGGGTCGTTCTGTACCTTTGCTGGTCGGTTCGTTGATGATGCTTTGGGCTTTGCTCTTACCTGGAACTACTGG TTCAATGATGCGGTGTCAACTGCGTCGGATATTATTGCGCTGCAGTTGCTGCTGGAGTTTATGGCGAGTCTTCTC AAAGTGGTGACTATCATCATCTTCATCATCCTCGGTATTGTTGTAAACTGCGGCGCAAACACCCAACACAAATAT ATCGGAAACAAGTACTTTTACACTGGAGAGGCCCCCTTCGTCGGAGGTATTGGCGGCTTCGCCTCTGTCTTCGTC ACAGCCTCTTTCGCCTACGGCGGCACCGAATCCATCGCCATCACCGCCGGTGAAACCAAAGACCCCGCTAAGAAT CTCCCCCGTGTCGTCCGCAACGTCTTCTGGCGTATCATCCTCTTCTACATCGTCTCAATCGTCCTCATCGGCCTC GACGTCCCCTACAACTACCCGAACCTATCCTCCGAAACTACCGCCACGAGTCCCTTCACCATCGTCTTCGTTGAA GCCGGCAGCGCCGTCGCCGGCAGTTTCATCAACGCCGTAATCATGACCAGCGTCATCTCCGCCGCCAACCACGCC CTCTTCGCCGGCTCTCGACTTCTCTACACCCTCGCCGTAGACGGCTACGCCCCCCGCTTCTTCGGCCACCTGAAC CGATTCCAAGTCCCCTGGGTAGCGGTCCTCGCTACCTCTGTTATCAGTGGCCTCTGCTTCGGAGCGAGCTACATT GGCGCCGGCCAGTTATGGTCGTGGCTGCAGAATATCGTCGGTGTCTCCAACCAACTCTCCTGGACCTTTATCGGT CTCGCCTCCCTCCGCTTCCGCGCCGCAATCCGCAAACAGAACCTGGAACATCTCCTTCCCTACAAGAACTGGACG TATCCCGTGGGACCGGTTCTTGCCATAGGACTGAATATCATTCTGATTCTGGTTCAGGGTTGGTCGTGCTTTAGC CCGCATTTCAAGGCCGTGGATTTCGTCTCGTATTATATCGAGTTGCCGATCATGCTGGTGATGTTCTTGGTGTGG AAGTTGGTGAAGAGGACGAAGTTGGTGAAATTGGAGGTTATGGATTTGGTTACCGATCGATATAATCTGGAGGTT GTTGGGGGGAGGGAGGTGGAGGAAGATGATGGGGACGGTAGTAATAATGGGGAGGGTGATGGGGATGGGGGATGG AGGAGTGAGAAGGGGGTTGTGGGGAAGGTGAAGAAGGTGGGGATGTGGTTGTTTCTGTGA |
| Gene | >Ani_SJS72_1|g4460.t1 ATGGCTCCTGGCGAGCCCATAGCTGAGCGTAATGCCAAGGACCCCAGCACCTTAGCAACCGATTATCTGGAGCCA GGGGCTCCCTATGTCAATGCGAATAAGCTGGCTCGGAAGCTCTCTCCCCGCCAGGTGCAGATGATCGCCATCGGC GGCACCATTGGTACGGGTCTGTTCCTGGGAACGGGTAAGGCGCTGGCCACCGGTGGGCCGGCCTCGATGCTGATC TCTTATACGATCTGTGGTGTGATTGTATTCATTACTATGTTGTCGCTGGGTGAGATGGCGGCGTTTATCCCTGTT GCCGGGTCGTTCTGTACCTTTGCTGGGTGAGTTTCTGTTCGAACTTGATTGGCAGTGAGGATGATATGCTGATGG TGAGATAGTCGGTTCGTTGATGATGCTTTGGGCTTTGCTCTTACCTGGAACTACTGGTTCAATGATGCGGTGTCA ACTGCGTCGGATATTATTGCGCTGCAGTTGCTGCTGGAGTATTGGACGGATAACTTCCCGGGATGGGCGATAAGC TTGATCTTTTTGGTCGTGGTTATTGCGCTGAATATGCTTTCGGTCAAGGTTTATGGCGAGGTTAGTTGCTAGTTG CTATCATTCAATTGACATGCATATACTGACTATCTGTCTTTGAATACTGGCTCAGTCTTCTCAAAGTGGTGACTA TCATCGTATGTCCCCCTACTTGAACCAACCTGTGTCACTCCATACTAAACCAACCACCAGATCTTCATCATCCTC GGTATTGTTGTAAACTGCGGCGCAAACACCCAACACAAATATATCGGAAACAAGTACTTTTACACTGGAGAGGCC CCCTTCGTCGGAGGTATTGGCGGCTTCGCCTCTGTCTTCGTCACAGCCTCTTTCGCCTAGTACGTTTACCCTCCA CCATTGAAAAGCTCCATACTGACCAACTCACAGCGGCGGCACCGAATCCATCGCCATCACCGCCGGTGAAACCAA AGACCCCGCTAAGAATCTCCCCCGTGTCGTCCGCAACGTCTTCTGGCGTATCATCCTCTTCTACATCGTCTCAAT CGTCCTCATCGGCCTCGACGTCCCCTACAACTACCCGAACCTATCCTCCGAAACTACCGCCACGAGTCCCTTCAC CATCGTCTTCGTTGAAGCCGGCAGCGCCGTCGCCGGCAGTTTCATCAACGCCGTAATCATGACCAGCGTCATCTC CGCCGCCAACCACGCCCTCTTCGCCGGCTCTCGACTTCTCTACACCCTCGCCGTAGACGGCTACGCCCCCCGCTT CTTCGGCCACCTGAACCGATTCCAAGTCCCCTGGGTAGCGGTCCTCGCTACCTCTGTTATCAGTGGCCTCTGCTT CGGAGCGAGCTACATTGGCGCCGGCCAGTTATGGTCGTGGCTGCAGAAGTAAGCCATCCCTCGCTCCCAAAGTAT CCTAATAACTAGTACTAATAACTATATAGTATCGTCGGTGTCTCCAACCAACTCTCCTGGACCTTTATCGGTCTC GCCTCCCTCCGCTTCCGCGCCGCAATCCGCAAACAGAACCTGGAACATCTCCTTCCCTACAAGAACTGGACGTAT CCCGTGGGACCGGTTCTTGCCATAGGACTGAATATCATTCTGATTCTGGTTCAGGGTTGGTCGTGCTTTAGCCCG CATTTCAAGGCCGTGGATTTCGTCTCGTATTATATCGAGTTGCCGATCATGCTGGTGATGTTCTTGGTGTGGAAG TTGGTGAAGAGGACGAAGTTGGTGAAATTGGAGGTTATGGATTTGGTTACCGATCGATATAATCTGGAGGTTGTT GGGGGGAGGGAGGTGGAGGAAGATGATGGGGACGGTAGTAATAATGGGGAGGGTGATGGGGATGGGGGATGGAGG AGTGAGAAGGGGGTTGTGGGGAAGGTGAAGAAGGTGGGGATGTGGTTGTTTCTGTGA |