© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g4450.t1 |
| Gene name | |
| Location | scaffold_027:234364..236295 |
| Strand | + |
| Gene length (bp) | 1931 |
| Transcript length (bp) | 1875 |
| Coding sequence length (bp) | 1875 |
| Protein length (aa) | 625 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01554 | MatE | MatE | 2.2E-34 | 193 | 353 |
| PF01554 | MatE | MatE | 3.0E-23 | 418 | 572 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016020 | membrane | Yes |
| GO:0042910 | xenobiotic transmembrane transporter activity | Yes |
| GO:0015297 | antiporter activity | Yes |
| GO:0009987 | cellular process | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005215 | transporter activity | No |
| GO:0005575 | cellular_component | No |
| GO:0015291 | secondary active transmembrane transporter activity | No |
| GO:0003674 | molecular_function | No |
| GO:0022804 | active transmembrane transporter activity | No |
| GO:0022857 | transmembrane transporter activity | No |
| GO:0006810 | transport | No |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 194 | 216 | 22 |
| 2 | 226 | 248 | 22 |
| 3 | 269 | 286 | 17 |
| 4 | 301 | 320 | 19 |
| 5 | 333 | 355 | 22 |
| 6 | 365 | 387 | 22 |
| 7 | 486 | 508 | 22 |
| 8 | 523 | 545 | 22 |
| 9 | 557 | 579 | 22 |
| 10 | 583 | 605 | 22 |
| Orthofinder run ID | 3 |
| Orthogroup | 3347 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g4450.t1 MARRNSIRGITDEQHGRYRSSSPLARTAIARDIEDYADDEGSMLTTDDEASETSTIRAINSQPGTNPHSLAGSYQ RPGFFTTVSHATVVPHRPDNEGLTRRERERAIEDERNLLTDNRCIEPGVQKGGRMRRGSGVEATETAALLGGQRR GSQYETVEDQEEIDRKWEEAVTAGLIQTTWKREAQVIGKNAAPLVVTFLLQYSLTVASIFTLGHLGKKELGAVSL ASMSASITGYAVYQGLATSLDTLCAQAYGSGRKKLVGLQMQKMVFFLWAISIPIILLWFFADRILVRIVPEREVA MLAGLYLKVVALGAPGYACFESGKRFVQAQGLFSASLYVLLICAPLNAVMNYVFVWQFGWGFIGAPIAVAITDNL MPLFLFLYVYFIDGSECWNGVTTRALRNWGPMIKLALPGLLMVEAECLAFEVLTLASSYLGTTPLAAQSILSTIS SITFQIPFPVSISGSTRVANLIGATLVDAAKLSAKVSMIGAVIVGLLNMLLLSSLRYYIPYLFTSDEEVIELVAQ VLPLCAAFQLFDALAANCNGILRGIGRQEIGGYVQLFCYYAIAMPISFGTTFGLNWGLFGLWSGVALALLLVSVI EAFFLTQTNWHRSVEDALRRNAMT* |
| Coding | >Ani_SJS72_1|g4450.t1 ATGGCCCGCCGGAACAGCATACGCGGGATCACAGACGAGCAGCACGGCCGGTATAGATCCAGCTCGCCGCTCGCC CGCACTGCCATCGCCCGCGATATTGAAGACTACGCCGACGACGAAGGATCCATGCTCACCACCGACGACGAAGCC TCCGAAACCTCCACCATCCGCGCCATTAACAGCCAGCCCGGCACGAATCCCCATTCGCTGGCCGGGTCGTACCAG CGGCCCGGATTCTTCACTACCGTCTCGCACGCGACGGTTGTGCCGCATCGGCCGGATAACGAGGGGTTAACGCGG CGGGAGCGGGAGCGGGCCATTGAGGATGAGCGGAATCTTCTCACTGATAATCGATGCATTGAGCCGGGTGTGCAG AAGGGAGGGCGCATGAGACGCGGGTCGGGTGTGGAAGCGACGGAGACGGCTGCATTGTTGGGCGGGCAGCGTCGC GGATCACAGTATGAGACGGTTGAGGATCAGGAGGAGATTGATCGGAAGTGGGAGGAGGCTGTTACCGCTGGGTTG ATTCAGACGACGTGGAAGCGTGAAGCTCAGGTCATTGGGAAGAATGCCGCGCCGTTGGTGGTTACCTTTCTGCTG CAGTATTCGTTGACCGTGGCGAGTATTTTTACCCTCGGGCATTTGGGCAAGAAGGAGCTTGGGGCCGTTAGTTTG GCTAGTATGAGTGCGAGTATTACGGGTTATGCTGTTTACCAAGGTCTGGCGACGAGTTTGGATACCCTGTGTGCG CAGGCGTATGGCTCCGGGAGGAAGAAGCTGGTAGGTCTGCAGATGCAAAAGATGGTCTTCTTCCTCTGGGCTATC TCCATACCTATTATTTTGTTGTGGTTCTTCGCCGACCGCATCCTCGTCCGGATCGTGCCGGAAAGAGAGGTCGCC ATGCTGGCGGGCTTGTACTTGAAGGTGGTTGCGCTGGGTGCTCCAGGGTACGCTTGCTTCGAGAGTGGCAAGCGG TTCGTGCAGGCGCAGGGACTCTTCTCTGCCTCGCTTTATGTGCTTCTCATCTGTGCCCCGTTGAATGCAGTGATG AACTACGTATTCGTATGGCAGTTCGGCTGGGGCTTCATCGGAGCTCCCATCGCTGTAGCCATCACAGACAACCTG ATGCCTCTCTTCCTCTTCCTGTACGTGTACTTCATCGACGGCTCCGAATGCTGGAACGGCGTCACCACCCGCGCC CTACGCAACTGGGGCCCCATGATCAAGCTCGCCCTTCCCGGGCTCCTCATGGTCGAAGCCGAATGTCTCGCCTTT GAAGTTCTGACCCTGGCGTCTTCGTATCTCGGCACCACCCCATTAGCCGCCCAATCCATCCTGTCCACCATCTCC AGCATCACCTTCCAAATCCCCTTCCCCGTCTCCATCTCCGGTAGCACCCGCGTCGCCAACCTCATCGGCGCGACG CTTGTCGACGCCGCCAAGCTATCCGCCAAGGTATCCATGATTGGCGCCGTCATCGTCGGGCTGCTGAACATGCTC CTCCTCTCTTCCCTGCGCTACTACATCCCGTACCTGTTCACCTCGGACGAGGAGGTCATTGAGCTCGTCGCCCAG GTCCTGCCTCTCTGTGCGGCGTTCCAGCTCTTTGATGCCTTGGCTGCCAACTGTAACGGAATTCTGCGCGGTATC GGTCGCCAGGAAATTGGCGGCTATGTGCAGCTGTTTTGCTACTATGCTATTGCTATGCCAATTAGTTTCGGCACG ACATTTGGATTGAACTGGGGCTTGTTTGGACTGTGGTCTGGTGTTGCGTTGGCCTTGTTATTGGTCTCGGTCATT GAGGCGTTCTTTTTGACGCAGACGAATTGGCATCGCTCGGTGGAGGATGCGCTGCGCCGGAATGCGATGACTTGA |
| Transcript | >Ani_SJS72_1|g4450.t1 ATGGCCCGCCGGAACAGCATACGCGGGATCACAGACGAGCAGCACGGCCGGTATAGATCCAGCTCGCCGCTCGCC CGCACTGCCATCGCCCGCGATATTGAAGACTACGCCGACGACGAAGGATCCATGCTCACCACCGACGACGAAGCC TCCGAAACCTCCACCATCCGCGCCATTAACAGCCAGCCCGGCACGAATCCCCATTCGCTGGCCGGGTCGTACCAG CGGCCCGGATTCTTCACTACCGTCTCGCACGCGACGGTTGTGCCGCATCGGCCGGATAACGAGGGGTTAACGCGG CGGGAGCGGGAGCGGGCCATTGAGGATGAGCGGAATCTTCTCACTGATAATCGATGCATTGAGCCGGGTGTGCAG AAGGGAGGGCGCATGAGACGCGGGTCGGGTGTGGAAGCGACGGAGACGGCTGCATTGTTGGGCGGGCAGCGTCGC GGATCACAGTATGAGACGGTTGAGGATCAGGAGGAGATTGATCGGAAGTGGGAGGAGGCTGTTACCGCTGGGTTG ATTCAGACGACGTGGAAGCGTGAAGCTCAGGTCATTGGGAAGAATGCCGCGCCGTTGGTGGTTACCTTTCTGCTG CAGTATTCGTTGACCGTGGCGAGTATTTTTACCCTCGGGCATTTGGGCAAGAAGGAGCTTGGGGCCGTTAGTTTG GCTAGTATGAGTGCGAGTATTACGGGTTATGCTGTTTACCAAGGTCTGGCGACGAGTTTGGATACCCTGTGTGCG CAGGCGTATGGCTCCGGGAGGAAGAAGCTGGTAGGTCTGCAGATGCAAAAGATGGTCTTCTTCCTCTGGGCTATC TCCATACCTATTATTTTGTTGTGGTTCTTCGCCGACCGCATCCTCGTCCGGATCGTGCCGGAAAGAGAGGTCGCC ATGCTGGCGGGCTTGTACTTGAAGGTGGTTGCGCTGGGTGCTCCAGGGTACGCTTGCTTCGAGAGTGGCAAGCGG TTCGTGCAGGCGCAGGGACTCTTCTCTGCCTCGCTTTATGTGCTTCTCATCTGTGCCCCGTTGAATGCAGTGATG AACTACGTATTCGTATGGCAGTTCGGCTGGGGCTTCATCGGAGCTCCCATCGCTGTAGCCATCACAGACAACCTG ATGCCTCTCTTCCTCTTCCTGTACGTGTACTTCATCGACGGCTCCGAATGCTGGAACGGCGTCACCACCCGCGCC CTACGCAACTGGGGCCCCATGATCAAGCTCGCCCTTCCCGGGCTCCTCATGGTCGAAGCCGAATGTCTCGCCTTT GAAGTTCTGACCCTGGCGTCTTCGTATCTCGGCACCACCCCATTAGCCGCCCAATCCATCCTGTCCACCATCTCC AGCATCACCTTCCAAATCCCCTTCCCCGTCTCCATCTCCGGTAGCACCCGCGTCGCCAACCTCATCGGCGCGACG CTTGTCGACGCCGCCAAGCTATCCGCCAAGGTATCCATGATTGGCGCCGTCATCGTCGGGCTGCTGAACATGCTC CTCCTCTCTTCCCTGCGCTACTACATCCCGTACCTGTTCACCTCGGACGAGGAGGTCATTGAGCTCGTCGCCCAG GTCCTGCCTCTCTGTGCGGCGTTCCAGCTCTTTGATGCCTTGGCTGCCAACTGTAACGGAATTCTGCGCGGTATC GGTCGCCAGGAAATTGGCGGCTATGTGCAGCTGTTTTGCTACTATGCTATTGCTATGCCAATTAGTTTCGGCACG ACATTTGGATTGAACTGGGGCTTGTTTGGACTGTGGTCTGGTGTTGCGTTGGCCTTGTTATTGGTCTCGGTCATT GAGGCGTTCTTTTTGACGCAGACGAATTGGCATCGCTCGGTGGAGGATGCGCTGCGCCGGAATGCGATGACTTGA |
| Gene | >Ani_SJS72_1|g4450.t1 ATGGCCCGCCGGAACAGCATACGCGGGATCACAGACGAGCAGCACGGCCGGTATAGATCCAGCTCGCCGCTCGCC CGCACTGCCATCGCCCGCGATATTGAAGACTACGCCGACGACGAAGGATCCATGCTCACCACCGACGACGAAGCC TCCGAAACCTCCACCATCCGCGCCATTAACAGCCAGCCCGGCACGAATCCCCATTCGCTGGCCGGGTCGTACCAG CGGCCCGGATTCTTCACTACCGTCTCGCACGCGACGGTTGTGCCGCATCGGCCGGATAACGAGGGGTTAACGCGG CGGGAGCGGGAGCGGGCCATTGAGGATGAGCGGAATCTTCTCACTGATAATCGATGCATTGAGCCGGGTGTGCAG AAGGGAGGGCGCATGAGACGCGGGTCGGGTGTGGAAGCGACGGAGACGGCTGCATTGTTGGGCGGGCAGCGTCGC GGATCACAGTATGAGACGGTTGAGGATCAGGAGGAGATTGATCGGAAGTGGGAGGAGGCTGTTACCGCTGGGTTG ATTCAGACGACGTGGAAGCGTGAAGCTCAGGTCATTGGGAAGAATGCCGCGCCGTTGGTGGTTACCTTTCTGCTG CAGTATTCGTTGACCGTGGCGAGTATTTTTACCCTCGGGCATTTGGGCAAGAAGGAGCTTGGGGCCGTTAGTTTG GCTAGTATGAGTGCGAGTATTACGGGTTATGCTGGTATGTTGCTGTTTAGACCTTCCCTTGGGTTTCTGATATTG ATTGACTGTGTTCAGTTTACCAAGGTCTGGCGACGAGTTTGGATACCCTGTGTGCGCAGGCGTATGGCTCCGGGA GGAAGAAGCTGGTAGGTCTGCAGATGCAAAAGATGGTCTTCTTCCTCTGGGCTATCTCCATACCTATTATTTTGT TGTGGTTCTTCGCCGACCGCATCCTCGTCCGGATCGTGCCGGAAAGAGAGGTCGCCATGCTGGCGGGCTTGTACT TGAAGGTGGTTGCGCTGGGTGCTCCAGGGTACGCTTGCTTCGAGAGTGGCAAGCGGTTCGTGCAGGCGCAGGGAC TCTTCTCTGCCTCGCTTTATGTGCTTCTCATCTGTGCCCCGTTGAATGCAGTGATGAACTACGTATTCGTATGGC AGTTCGGCTGGGGCTTCATCGGAGCTCCCATCGCTGTAGCCATCACAGACAACCTGATGCCTCTCTTCCTCTTCC TGTACGTGTACTTCATCGACGGCTCCGAATGCTGGAACGGCGTCACCACCCGCGCCCTACGCAACTGGGGCCCCA TGATCAAGCTCGCCCTTCCCGGGCTCCTCATGGTCGAAGCCGAATGTCTCGCCTTTGAAGTTCTGACCCTGGCGT CTTCGTATCTCGGCACCACCCCATTAGCCGCCCAATCCATCCTGTCCACCATCTCCAGCATCACCTTCCAAATCC CCTTCCCCGTCTCCATCTCCGGTAGCACCCGCGTCGCCAACCTCATCGGCGCGACGCTTGTCGACGCCGCCAAGC TATCCGCCAAGGTATCCATGATTGGCGCCGTCATCGTCGGGCTGCTGAACATGCTCCTCCTCTCTTCCCTGCGCT ACTACATCCCGTACCTGTTCACCTCGGACGAGGAGGTCATTGAGCTCGTCGCCCAGGTCCTGCCTCTCTGTGCGG CGTTCCAGCTCTTTGATGCCTTGGCTGCCAACTGTAACGGAATTCTGCGCGGTATCGGTCGCCAGGAAATTGGCG GCTATGTGCAGCTGTTTTGCTACTATGCTATTGCTATGCCAATTAGTTTCGGCACGACATTTGGATTGAACTGGG GCTTGTTTGGACTGTGGTCTGGTGTTGCGTTGGCCTTGTTATTGGTCTCGGTCATTGAGGCGTTCTTTTTGACGC AGACGAATTGGCATCGCTCGGTGGAGGATGCGCTGCGCCGGAATGCGATGACTTGA |