Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ani_SJS72_1\|g4438.t1
Gene name
Location	scaffold_027:192059..192926
Strand	+
Gene length (bp)	867
Transcript length (bp)	771
Coding sequence length (bp)	771
Protein length (aa)	257

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00957	Synaptobrevin	Synaptobrevin	3.2E-31	158	244
PF13774	Longin	Regulated-SNARE-like domain	1.8E-29	41	142

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 26	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	223	245	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ani_SJS72_1\|g4438.t1 MAASSSKPSSFLLYSCIAHRTTILAEHSSPGTSSTAASSLASIILPKISHDQPQKLTYTHERLFVHYIADSPTTP STSDDPRQGEPNSYAPLSYIVVATAEQGRRIPFAFLLEIKRKFLSTYSPSSTDFSALPAYGCAAFNNELRSLLQT YNTAPPADSLASARREIDSVRNIMTENIERVLERGERIDLLVDKTDRLGGSAHDFRIRSRGLRRRMWWKNIKLMV LLAVVVVFLVYLFVGMGCGLPAWGKCVGQSQ*
Coding	>Ani_SJS72_1\|g4438.t1 ATGGCCGCCTCCTCATCGAAGCCATCGAGCTTCCTGCTCTATTCCTGCATCGCCCACCGCACAACCATTCTCGCC GAACACTCCTCCCCAGGCACATCCTCGACCGCCGCCTCGTCCCTGGCCTCTATCATCCTCCCAAAGATCAGCCAC GACCAACCGCAAAAGCTCACCTACACCCACGAGCGTCTCTTCGTACACTACATTGCCGACTCGCCCACAACACCC AGCACCTCCGACGACCCCCGCCAGGGCGAACCCAACTCCTATGCGCCCCTCAGCTACATCGTCGTCGCAACCGCC GAACAAGGCCGCCGTATTCCTTTCGCCTTCCTCCTCGAAATCAAGCGCAAGTTCCTCTCTACTTACTCACCCTCC AGCACGGACTTCTCTGCTCTCCCGGCTTACGGCTGCGCCGCGTTCAACAATGAGCTCCGCTCGCTGCTGCAAACG TACAATACGGCCCCGCCGGCGGATTCGCTGGCCTCGGCAAGACGGGAAATCGATAGCGTGCGGAACATCATGACG GAGAATATTGAGAGAGTGCTGGAGAGGGGAGAGCGGATTGATCTCCTGGTGGACAAGACGGATCGGTTGGGTGGG AGTGCGCATGATTTTCGCATTAGGAGTCGTGGCTTGAGGAGACGTATGTGGTGGAAGAATATCAAGTTGATGGTT TTGTTGGCTGTTGTGGTTGTGTTCTTGGTGTATTTGTTTGTGGGGATGGGGTGTGGGTTGCCCGCTTGGGGGAAG TGTGTTGGGCAGAGTCAGTAA
Transcript	>Ani_SJS72_1\|g4438.t1 ATGGCCGCCTCCTCATCGAAGCCATCGAGCTTCCTGCTCTATTCCTGCATCGCCCACCGCACAACCATTCTCGCC GAACACTCCTCCCCAGGCACATCCTCGACCGCCGCCTCGTCCCTGGCCTCTATCATCCTCCCAAAGATCAGCCAC GACCAACCGCAAAAGCTCACCTACACCCACGAGCGTCTCTTCGTACACTACATTGCCGACTCGCCCACAACACCC AGCACCTCCGACGACCCCCGCCAGGGCGAACCCAACTCCTATGCGCCCCTCAGCTACATCGTCGTCGCAACCGCC GAACAAGGCCGCCGTATTCCTTTCGCCTTCCTCCTCGAAATCAAGCGCAAGTTCCTCTCTACTTACTCACCCTCC AGCACGGACTTCTCTGCTCTCCCGGCTTACGGCTGCGCCGCGTTCAACAATGAGCTCCGCTCGCTGCTGCAAACG TACAATACGGCCCCGCCGGCGGATTCGCTGGCCTCGGCAAGACGGGAAATCGATAGCGTGCGGAACATCATGACG GAGAATATTGAGAGAGTGCTGGAGAGGGGAGAGCGGATTGATCTCCTGGTGGACAAGACGGATCGGTTGGGTGGG AGTGCGCATGATTTTCGCATTAGGAGTCGTGGCTTGAGGAGACGTATGTGGTGGAAGAATATCAAGTTGATGGTT TTGTTGGCTGTTGTGGTTGTGTTCTTGGTGTATTTGTTTGTGGGGATGGGGTGTGGGTTGCCCGCTTGGGGGAAG TGTGTTGGGCAGAGTCAGTAA
Gene	>Ani_SJS72_1\|g4438.t1 ATGGCCGCCTCCTCATCGAAGCCATCGAGCTTCCTGCTCTAGTACGTGATTCAAACAGCAGCTGGAGACAGCACA CCGCGACATCTATCTTCTCCCTCAAATAGCATCTCCAACTAACCACTCACCCATATCTACAGTTCCTGCATCGCC CACCGCACAACCATTCTCGCCGAACACTCCTCCCCAGGCACATCCTCGACCGCCGCCTCGTCCCTGGCCTCTATC ATCCTCCCAAAGATCAGCCACGACCAACCGCAAAAGCTCACCTACACCCACGAGCGTCTCTTCGTACACTACATT GCCGACTCGCCCACAACACCCAGCACCTCCGACGACCCCCGCCAGGGCGAACCCAACTCCTATGCGCCCCTCAGC TACATCGTCGTCGCAACCGCCGAACAAGGCCGCCGTATTCCTTTCGCCTTCCTCCTCGAAATCAAGCGCAAGTTC CTCTCTACTTACTCACCCTCCAGCACGGACTTCTCTGCTCTCCCGGCTTACGGCTGCGCCGCGTTCAACAATGAG CTCCGCTCGCTGCTGCAAACGTACAATACGGCCCCGCCGGCGGATTCGCTGGCCTCGGCAAGACGGGAAATCGAT AGCGTGCGGAACATCATGACGGAGAATATTGAGAGAGTGCTGGAGAGGGGAGAGCGGATTGATCTCCTGGTGGAC AAGACGGATCGGTTGGGTGGGAGTGCGCATGATTTTCGCATTAGGAGTCGTGGCTTGAGGAGACGTATGTGGTGG AAGAATATCAAGTTGATGGTTTTGTTGGCTGTTGTGGTTGTGTTCTTGGTGTATTTGTTTGTGGGGATGGGGTGT GGGTTGCCCGCTTGGGGGAAGTGTGTTGGGCAGAGTCAGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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