© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ani_SJS72_1|g4430.t1 |
| Gene name | |
| Location | scaffold_027:165142..166977 |
| Strand | - |
| Gene length (bp) | 1835 |
| Transcript length (bp) | 1464 |
| Coding sequence length (bp) | 1464 |
| Protein length (aa) | 488 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 5.9E-33 | 44 | 408 |
| PF00083 | Sugar_tr | Sugar (and other) transporter | 1.5E-05 | 125 | 440 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0009987 | cellular process | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005215 | transporter activity | No |
| GO:0005575 | cellular_component | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0003674 | molecular_function | No |
| GO:0006810 | transport | No |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 61 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 76 | 98 | 22 |
| 2 | 105 | 127 | 22 |
| 3 | 131 | 153 | 22 |
| 4 | 165 | 187 | 22 |
| 5 | 197 | 219 | 22 |
| 6 | 271 | 293 | 22 |
| 7 | 303 | 325 | 22 |
| 8 | 332 | 351 | 19 |
| 9 | 356 | 378 | 22 |
| 10 | 391 | 410 | 19 |
| 11 | 420 | 442 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g4430.t1 MASTPEKTVEADEKAASPTTSNVTNINEKALLRKLDYRLLPPLTILYLLSFLDRSNVGNARLEGMATEIHMSGDQ YLTGLTLYFIGYVLFEVPCNIVLKKTTPRIWLPTLTLVWGVVATLLGVVQNYAGYLTSRTALGIAESGLFPGVVF YLSMWYKRNEQHYRVALFFSAASLAGAFGGILAWGIAHMKGVGGYSGWRWIFILEGLLTVLMSIGAYFWVYNYPS TAEFLTPEERQFIQFRLKNDNDSTRDEQFTWSAVFDAFKDIKVWLYGLAFHTMSLPLYTLSLFMPTIISALGYTS AQAQLLTVPPYAVAFILTITVAILSERTHRRAPFILLSTGLACIGYILLLSDHRPGVSYLGTFFAAAGIYPAVAI VLSWPANNVSGQTKRCIANAMQISIGNLGAVLGTQLYRTETSPRYFLGHGFALGYLVANLVVVGVLWEVLRRENR IKAEVREREGMEALMGDVGDAEGDFLGDRDPRWVFQT* |
| Coding | >Ani_SJS72_1|g4430.t1 ATGGCATCCACACCTGAAAAGACAGTAGAGGCCGACGAAAAGGCCGCCTCCCCAACCACAAGCAATGTCACCAAT ATCAACGAGAAAGCTCTCCTTCGCAAACTAGACTACCGTCTTCTCCCACCACTAACCATCCTATATCTCTTATCA TTCCTCGATCGCAGCAATGTGGGAAACGCCCGACTCGAAGGCATGGCCACTGAAATCCACATGTCAGGAGACCAA TACCTCACCGGCCTAACCCTCTACTTCATCGGCTACGTCCTATTCGAAGTTCCCTGCAACATCGTCCTGAAGAAG ACTACTCCCCGGATCTGGCTCCCCACTCTAACATTAGTCTGGGGCGTTGTGGCGACGCTTCTGGGCGTGGTTCAG AACTATGCGGGATATCTGACTTCACGGACTGCCCTCGGCATAGCAGAAAGCGGCCTCTTCCCAGGAGTCGTCTTC TACCTATCCATGTGGTACAAACGCAACGAGCAACACTACCGCGTAGCATTATTCTTCAGTGCTGCTTCATTAGCA GGTGCATTCGGAGGGATTCTAGCTTGGGGCATAGCCCACATGAAAGGCGTAGGCGGATACAGTGGCTGGAGATGG ATATTCATCCTGGAAGGACTCCTCACAGTCCTCATGTCCATTGGCGCTTACTTCTGGGTCTACAATTACCCCTCA ACAGCCGAATTCTTGACCCCCGAAGAGCGCCAATTCATCCAGTTCCGTCTGAAGAACGACAACGACTCGACCCGT GACGAACAATTCACCTGGAGTGCTGTCTTCGACGCCTTCAAAGACATCAAGGTCTGGTTATATGGACTAGCGTTT CACACGATGTCGCTGCCGCTGTATACTTTGTCTTTGTTTATGCCAACAATTATCTCCGCCCTAGGCTACACATCC GCCCAAGCTCAACTCCTCACTGTCCCGCCTTACGCCGTCGCCTTCATCCTAACCATAACCGTAGCTATTCTGTCA GAGCGCACGCACCGTCGCGCGCCGTTCATTCTCCTTTCCACGGGCCTAGCATGCATTGGATACATTTTACTTCTG AGTGATCATCGACCAGGGGTATCCTATCTGGGCACGTTCTTCGCTGCAGCGGGGATCTACCCCGCCGTGGCGATT GTGTTGTCGTGGCCGGCGAATAACGTCTCCGGTCAGACGAAGCGGTGTATTGCGAATGCGATGCAGATTTCGATT GGCAATTTGGGGGCTGTGTTGGGGACGCAGCTGTATCGGACGGAGACGAGTCCGAGGTATTTTTTGGGTCATGGG TTTGCGTTGGGGTATCTAGTGGCGAATCTGGTGGTTGTGGGAGTGCTGTGGGAGGTGCTGAGGAGGGAGAATAGG ATTAAGGCGGAGGTGAGGGAGAGGGAGGGCATGGAGGCGTTAATGGGGGATGTGGGTGATGCTGAGGGGGATTTC TTGGGGGATCGGGATCCGAGATGGGTGTTTCAGACGTAG |
| Transcript | >Ani_SJS72_1|g4430.t1 ATGGCATCCACACCTGAAAAGACAGTAGAGGCCGACGAAAAGGCCGCCTCCCCAACCACAAGCAATGTCACCAAT ATCAACGAGAAAGCTCTCCTTCGCAAACTAGACTACCGTCTTCTCCCACCACTAACCATCCTATATCTCTTATCA TTCCTCGATCGCAGCAATGTGGGAAACGCCCGACTCGAAGGCATGGCCACTGAAATCCACATGTCAGGAGACCAA TACCTCACCGGCCTAACCCTCTACTTCATCGGCTACGTCCTATTCGAAGTTCCCTGCAACATCGTCCTGAAGAAG ACTACTCCCCGGATCTGGCTCCCCACTCTAACATTAGTCTGGGGCGTTGTGGCGACGCTTCTGGGCGTGGTTCAG AACTATGCGGGATATCTGACTTCACGGACTGCCCTCGGCATAGCAGAAAGCGGCCTCTTCCCAGGAGTCGTCTTC TACCTATCCATGTGGTACAAACGCAACGAGCAACACTACCGCGTAGCATTATTCTTCAGTGCTGCTTCATTAGCA GGTGCATTCGGAGGGATTCTAGCTTGGGGCATAGCCCACATGAAAGGCGTAGGCGGATACAGTGGCTGGAGATGG ATATTCATCCTGGAAGGACTCCTCACAGTCCTCATGTCCATTGGCGCTTACTTCTGGGTCTACAATTACCCCTCA ACAGCCGAATTCTTGACCCCCGAAGAGCGCCAATTCATCCAGTTCCGTCTGAAGAACGACAACGACTCGACCCGT GACGAACAATTCACCTGGAGTGCTGTCTTCGACGCCTTCAAAGACATCAAGGTCTGGTTATATGGACTAGCGTTT CACACGATGTCGCTGCCGCTGTATACTTTGTCTTTGTTTATGCCAACAATTATCTCCGCCCTAGGCTACACATCC GCCCAAGCTCAACTCCTCACTGTCCCGCCTTACGCCGTCGCCTTCATCCTAACCATAACCGTAGCTATTCTGTCA GAGCGCACGCACCGTCGCGCGCCGTTCATTCTCCTTTCCACGGGCCTAGCATGCATTGGATACATTTTACTTCTG AGTGATCATCGACCAGGGGTATCCTATCTGGGCACGTTCTTCGCTGCAGCGGGGATCTACCCCGCCGTGGCGATT GTGTTGTCGTGGCCGGCGAATAACGTCTCCGGTCAGACGAAGCGGTGTATTGCGAATGCGATGCAGATTTCGATT GGCAATTTGGGGGCTGTGTTGGGGACGCAGCTGTATCGGACGGAGACGAGTCCGAGGTATTTTTTGGGTCATGGG TTTGCGTTGGGGTATCTAGTGGCGAATCTGGTGGTTGTGGGAGTGCTGTGGGAGGTGCTGAGGAGGGAGAATAGG ATTAAGGCGGAGGTGAGGGAGAGGGAGGGCATGGAGGCGTTAATGGGGGATGTGGGTGATGCTGAGGGGGATTTC TTGGGGGATCGGGATCCGAGATGGGTGTTTCAGACGTAG |
| Gene | >Ani_SJS72_1|g4430.t1 ATGGCATCCACACCTGAAAAGACAGTAGAGGCCGACGAAAAGGCCGCCTCCCCAACCACAAGCAATGTCACCAAT ATCAACGAGAAAGCTCTCCTTCGCAAACTAGACTACCGTCTTCTCCCACCACTAACCATCCTATATCTCTTATCA TTCCTCGATCGCAGCAATGGTACCCCCTCCTTCCCACACCCGATGATTCGATAAAATCTAACGAGACCCCATTAT TACAGTGGGAAACGCCCGACTCGAAGGCATGGCCACTGAAATCCACATGTGTACGTACCTACCACATTCACCCCC ACCACATCACATAACAACCCTAATAAGAAGACAGCAGGAGACCAATACCTCACCGGCCTAACCCTCTACTTCATC GGCTACGTCCTATTCGAAGTTCCCTGCAACATCGTCCTGAAGAAGACTACTCCCCGGATCTGGCTCCCCACTCTA ACATTAGTCTGGGGCGTTGTGGCGACGCTTCTGGGCGTGGTTCAGAACTATGCGGGATATCTGACTTCACGGACT GGTACACTTCCCCTTTAATCTAATGATATATATGATGCTAATGGGCGTGTTAAACAGCCCTCGGCATAGCAGAAA GCGGCCTCTTCCCAGGAGTCGTCTTCTACCTATCCATGTGGTACAAACGCAACGAGCAACACTACCGCGTAGCAT TATTCTTCAGTGCTGCTTCATTAGCAGGTGCATTCGGAGGGATTCTAGCTTGGGTTGGTCTACCACCCCGTTCCC TCCTTTATCATACACTGAGCTAATCATACTAAACAATGGATCAGGGCATAGCCCACATGAAAGGCGTAGGCGGAT ACAGTGGCTGGAGATGGATATTCATCCTGGTACTATCCCCAACCCTCTTCCCCCAATACATCAAACCCCAACTAA CCCAAACCTTTCTAAATGAAGGAAGGACTCCTCACAGTCCTCATGTCCATTGGCGCTTACTTCTGGGTCTACAAT TACCCCTCAACAGCCGAATTCTTGACCCCCGAAGAGCGCCAATTCATCCAGTTCCGTCTGAAGAACGACAACGAC TCGACCCGTGACGAACAATTCACCTGGAGTGCTGTCTTCGACGCCTTCAAAGACATCAAGGTCTGGTTATATGGA CTAGCGTTTCACACGATGTCGCTGCCGCTGTATACTTTGTCTTTGTTTATGGTGAGCTATCCCCCCACGCTCCCT CCAACCCACAAACACTCACTAATCGAAACCCGCTACAGCCAACAATTATCTCCGCCCTAGGCTACACATCCGCCC AAGCTCAACTCCTCACTGTCCCGCCTTACGCCGTCGCCTTCATCCTAACCATAACCGTAGCTATTCTGTCAGAGC GCACGCACCGTCGCGCGCCGTTCATTCTCCTTTCCACGGGCCTAGCATGCATTGGATACATTTTACTTCTGAGTG ATCATCGACCAGGGGTATCCTATCTGGGCACGTTCTTCGCTGCAGCGGGGATCTACCCCGCCGTGGCGATTGTGT TGTCGTGGCCGGCGAATAACGTCTCCGGTCAGACGAAGCGGTGTATTGCGAATGCGATGCAGATTTCGATTGGCA ATTTGGGGGCTGTGTTGGGGACGCAGCTGTATCGGACGGAGACGAGTCCGAGGTATTTTTTGGGTCATGGGTTTG CGTTGGGGTATCTAGTGGCGAATCTGGTGGTTGTGGGAGTGCTGTGGGAGGTGCTGAGGAGGGAGAATAGGATTA AGGCGGAGGTGAGGGAGAGGGAGGGCATGGAGGCGTTAATGGGGGATGTGGGTGATGCTGAGGGGGATTTCTTGG GGGATCGGGATCCGAGATGGGTGTTTCAGACGTAG |