Protein ID | Ani_SJS72_1|g4333.t1 |
Gene name | |
Location | scaffold_026:219700..222072 |
Strand | + |
Gene length (bp) | 2372 |
Transcript length (bp) | 2307 |
Coding sequence length (bp) | 2307 |
Protein length (aa) | 769 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00096 | zf-C2H2 | Zinc finger, C2H2 type | 4.6E-06 | 537 | 559 |
PF00096 | zf-C2H2 | Zinc finger, C2H2 type | 7.0E-03 | 565 | 587 |
PF13912 | zf-C2H2_6 | C2H2-type zinc finger | 1.0E-03 | 537 | 561 |
PF12874 | zf-met | Zinc-finger of C2H2 type | 3.6E-02 | 537 | 559 |
Transcription Factor Class (based on PFAM domains) |
---|
C2H2 zinc finger |
Orthofinder run ID | 3 |
Orthogroup | 4461 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS72_1|g4333.t1 MASQDNLPDSGQSPAGMRSRSISPYNDPSAGLTLDVSVATTTAPYTSTSYNPSNPGASDSYGYNPTGYLSAPSAA QTLAPTDQTYSHSLQLPQSFDAGLMPQLDQSTGLSLQQQQQQQQQQQQASDENFSNLLNSNPTDFDFALYQNPSP NSTAAPDYDSPLLLDPQVHSHSRPGSQAVNPADLVSQIPSPHPSASPQLSPISPQDHYQHSSPGPMSPPSSTPGT YYTPQHSRHTSLDPASAAYMSGNVHTDWQAVMANSAFQGHRRAPSEVSEVSSAAPSPYMSQHESFDGVENNPSPL LAPQHDPGLYDNALGIESFTLSDGQQQHHPQGISPAHSPYISPQLMPQQPTDMIPNVPYISAPAGNTQYPTPPTD MYGEGMMVQGNAGMGDIGQASQMAPPSINVEFAPPAKNLNLPQTKPSADLDSLSPPVAMRSRMRSKSDPYAHPAS RARSSSTSTSLEPFVPPSPRSLSPFDTMGRQPHSNPSSREPSPSRSGRRLSTSSIDSRNYILGLADPQRPGGNPN DSKRVQKHPATFQCHLCPKRFTRAYNLRSHLRTHTDERPFVCTVCGKAFARQHDRKRHEGLHSGEKKFVCRGDLS RGGQWGCGRRFARADALGRHFRSEAGRICIKPLLDEESQERERTMMDQQQHLQPIPPPLMVPGMDGQHTSNFVLP AALLAQYPALQTLQWDQIPATADDPSDLGGRSSFDASSGGEFGFDEDESGLSSVSGISGSYGGPSNMYDVNNPGQ MLGVNPAESGYRETDWRA* |
Coding | >Ani_SJS72_1|g4333.t1 ATGGCATCCCAGGACAACCTGCCCGACTCGGGGCAGTCGCCCGCTGGGATGAGGAGCCGCAGTATCAGTCCATAT AATGATCCCTCCGCCGGATTGACCTTGGATGTCTCCGTCGCAACCACTACAGCTCCTTATACCTCTACTTCCTAC AACCCCTCCAATCCAGGCGCCTCTGATTCCTACGGCTATAACCCCACCGGTTATCTCTCCGCACCCTCCGCCGCG CAGACGTTGGCCCCGACCGATCAAACATACTCGCACAGCCTTCAACTACCACAATCCTTCGATGCTGGGTTGATG CCCCAGCTGGACCAGTCGACGGGCCTGTCCTTGCAGCAGCAACAGCAGCAGCAGCAACAACAACAACAGGCGTCA GACGAGAACTTCTCTAATCTGTTGAACTCAAACCCCACAGATTTCGACTTTGCCCTATACCAGAACCCTAGTCCG AATAGCACGGCCGCCCCGGACTACGACTCCCCGCTCTTGCTAGATCCCCAAGTTCACAGCCATTCCCGACCGGGC AGTCAAGCGGTTAATCCTGCCGACCTCGTCAGCCAGATACCCTCTCCTCATCCCTCGGCTTCTCCGCAATTGTCC CCGATCTCTCCCCAGGACCATTATCAGCACTCATCTCCCGGACCCATGTCGCCGCCCAGCTCGACGCCGGGGACT TACTACACCCCCCAACATTCCCGCCATACTTCCTTGGATCCTGCTAGCGCCGCATACATGTCGGGCAATGTGCAT ACGGATTGGCAGGCAGTCATGGCCAACTCTGCCTTCCAGGGCCATCGACGGGCCCCGTCTGAGGTGTCTGAGGTG TCATCCGCTGCCCCATCTCCATACATGTCTCAGCATGAATCTTTTGATGGCGTGGAGAACAACCCGTCCCCCCTC CTAGCACCCCAGCATGACCCCGGTCTTTACGACAATGCACTAGGCATTGAATCTTTCACTTTGTCGGATGGTCAG CAACAGCACCATCCACAGGGCATCAGCCCTGCTCACAGTCCATATATCTCCCCGCAGTTGATGCCTCAACAGCCC ACAGACATGATTCCCAACGTGCCGTACATCTCTGCTCCTGCGGGCAACACGCAGTACCCCACCCCACCGACCGAC ATGTACGGGGAGGGTATGATGGTCCAAGGAAACGCTGGCATGGGTGATATAGGTCAAGCATCGCAAATGGCGCCC CCATCTATCAACGTGGAATTCGCGCCCCCGGCGAAGAATCTCAACCTCCCGCAGACGAAGCCCAGTGCGGATTTG GACTCGTTGAGTCCACCCGTTGCCATGCGCTCCCGCATGCGCAGTAAGTCGGACCCATACGCCCACCCGGCTTCT CGCGCACGGTCATCGTCTACCTCGACCAGCCTGGAGCCATTTGTGCCTCCGTCACCCCGGTCGCTGTCGCCCTTT GATACCATGGGGCGACAGCCACATAGTAATCCCAGCTCCCGAGAGCCGTCTCCCTCGCGGTCGGGTCGGCGACTG TCTACGTCGTCGATCGACAGTAGAAATTACATTCTCGGCCTTGCGGATCCCCAGAGGCCTGGGGGCAACCCTAAC GACTCCAAACGTGTCCAGAAACACCCGGCCACGTTCCAGTGTCACCTGTGCCCCAAGCGCTTTACGCGAGCCTAC AACCTGCGATCCCATTTGCGTACGCACACCGATGAACGGCCGTTCGTATGTACTGTCTGCGGGAAAGCCTTTGCG CGACAGCATGATCGGAAGCGGCACGAGGGGCTGCATTCCGGTGAAAAGAAGTTCGTCTGTCGCGGTGACCTCTCC CGGGGTGGACAGTGGGGATGTGGTCGGCGATTCGCTCGTGCAGATGCTCTGGGTCGTCATTTCCGTTCCGAAGCT GGTCGGATCTGTATCAAGCCGTTGTTGGATGAAGAGTCTCAAGAGCGGGAGCGCACGATGATGGATCAGCAACAG CACTTACAGCCTATACCACCTCCGTTGATGGTGCCAGGAATGGATGGCCAACATACCAGCAATTTCGTTCTTCCT GCCGCGTTGCTGGCCCAATACCCCGCGCTGCAGACCTTGCAGTGGGATCAGATCCCTGCCACCGCAGACGATCCC AGTGATTTAGGAGGTCGCAGCAGCTTCGATGCTAGTTCCGGCGGAGAGTTTGGGTTTGATGAAGACGAATCTGGC CTCAGTAGTGTCTCTGGCATAAGCGGAAGCTACGGAGGTCCGAGTAACATGTATGATGTGAACAATCCGGGCCAA ATGTTAGGAGTAAACCCTGCAGAATCTGGCTATCGAGAAACGGATTGGAGAGCATGA |
Transcript | >Ani_SJS72_1|g4333.t1 ATGGCATCCCAGGACAACCTGCCCGACTCGGGGCAGTCGCCCGCTGGGATGAGGAGCCGCAGTATCAGTCCATAT AATGATCCCTCCGCCGGATTGACCTTGGATGTCTCCGTCGCAACCACTACAGCTCCTTATACCTCTACTTCCTAC AACCCCTCCAATCCAGGCGCCTCTGATTCCTACGGCTATAACCCCACCGGTTATCTCTCCGCACCCTCCGCCGCG CAGACGTTGGCCCCGACCGATCAAACATACTCGCACAGCCTTCAACTACCACAATCCTTCGATGCTGGGTTGATG CCCCAGCTGGACCAGTCGACGGGCCTGTCCTTGCAGCAGCAACAGCAGCAGCAGCAACAACAACAACAGGCGTCA GACGAGAACTTCTCTAATCTGTTGAACTCAAACCCCACAGATTTCGACTTTGCCCTATACCAGAACCCTAGTCCG AATAGCACGGCCGCCCCGGACTACGACTCCCCGCTCTTGCTAGATCCCCAAGTTCACAGCCATTCCCGACCGGGC AGTCAAGCGGTTAATCCTGCCGACCTCGTCAGCCAGATACCCTCTCCTCATCCCTCGGCTTCTCCGCAATTGTCC CCGATCTCTCCCCAGGACCATTATCAGCACTCATCTCCCGGACCCATGTCGCCGCCCAGCTCGACGCCGGGGACT TACTACACCCCCCAACATTCCCGCCATACTTCCTTGGATCCTGCTAGCGCCGCATACATGTCGGGCAATGTGCAT ACGGATTGGCAGGCAGTCATGGCCAACTCTGCCTTCCAGGGCCATCGACGGGCCCCGTCTGAGGTGTCTGAGGTG TCATCCGCTGCCCCATCTCCATACATGTCTCAGCATGAATCTTTTGATGGCGTGGAGAACAACCCGTCCCCCCTC CTAGCACCCCAGCATGACCCCGGTCTTTACGACAATGCACTAGGCATTGAATCTTTCACTTTGTCGGATGGTCAG CAACAGCACCATCCACAGGGCATCAGCCCTGCTCACAGTCCATATATCTCCCCGCAGTTGATGCCTCAACAGCCC ACAGACATGATTCCCAACGTGCCGTACATCTCTGCTCCTGCGGGCAACACGCAGTACCCCACCCCACCGACCGAC ATGTACGGGGAGGGTATGATGGTCCAAGGAAACGCTGGCATGGGTGATATAGGTCAAGCATCGCAAATGGCGCCC CCATCTATCAACGTGGAATTCGCGCCCCCGGCGAAGAATCTCAACCTCCCGCAGACGAAGCCCAGTGCGGATTTG GACTCGTTGAGTCCACCCGTTGCCATGCGCTCCCGCATGCGCAGTAAGTCGGACCCATACGCCCACCCGGCTTCT CGCGCACGGTCATCGTCTACCTCGACCAGCCTGGAGCCATTTGTGCCTCCGTCACCCCGGTCGCTGTCGCCCTTT GATACCATGGGGCGACAGCCACATAGTAATCCCAGCTCCCGAGAGCCGTCTCCCTCGCGGTCGGGTCGGCGACTG TCTACGTCGTCGATCGACAGTAGAAATTACATTCTCGGCCTTGCGGATCCCCAGAGGCCTGGGGGCAACCCTAAC GACTCCAAACGTGTCCAGAAACACCCGGCCACGTTCCAGTGTCACCTGTGCCCCAAGCGCTTTACGCGAGCCTAC AACCTGCGATCCCATTTGCGTACGCACACCGATGAACGGCCGTTCGTATGTACTGTCTGCGGGAAAGCCTTTGCG CGACAGCATGATCGGAAGCGGCACGAGGGGCTGCATTCCGGTGAAAAGAAGTTCGTCTGTCGCGGTGACCTCTCC CGGGGTGGACAGTGGGGATGTGGTCGGCGATTCGCTCGTGCAGATGCTCTGGGTCGTCATTTCCGTTCCGAAGCT GGTCGGATCTGTATCAAGCCGTTGTTGGATGAAGAGTCTCAAGAGCGGGAGCGCACGATGATGGATCAGCAACAG CACTTACAGCCTATACCACCTCCGTTGATGGTGCCAGGAATGGATGGCCAACATACCAGCAATTTCGTTCTTCCT GCCGCGTTGCTGGCCCAATACCCCGCGCTGCAGACCTTGCAGTGGGATCAGATCCCTGCCACCGCAGACGATCCC AGTGATTTAGGAGGTCGCAGCAGCTTCGATGCTAGTTCCGGCGGAGAGTTTGGGTTTGATGAAGACGAATCTGGC CTCAGTAGTGTCTCTGGCATAAGCGGAAGCTACGGAGGTCCGAGTAACATGTATGATGTGAACAATCCGGGCCAA ATGTTAGGAGTAAACCCTGCAGAATCTGGCTATCGAGAAACGGATTGGAGAGCATGA |
Gene | >Ani_SJS72_1|g4333.t1 ATGGCATCCCAGGACAACCTGCCCGACTCGGGGCAGTCGCCCGCTGGGATGAGGAGCCGCAGTATCAGTCCATAT AATGATCCCTCCGCCGGATTGACCTTGGATGTCTCCGTCGCAACCACTACAGCTCCTTATACCTCTACTTCCTAC AACCCCTCCAATCCAGGCGCCTCTGATTCCTACGGCTATAACCCCACCGGTTATCTCTCCGCACCCTCCGCCGCG CAGACGTTGGCCCCGACCGATCAAACATACTCGCACAGCCTTCAACTACCACAATCCTTCGATGCTGGGTTGATG CCCCAGCTGGACCAGTCGACGGGCCTGTCCTTGCAGCAGCAACAGCAGCAGCAGCAACAACAACAACAGGCGTCA GACGAGAACTTCTCTAATCTGTTGAACTCAAACCCCACAGATTTCGACTTTGCCCTATACCAGAACCCTAGTCCG AATAGCACGGCCGCCCCGGACTACGACTCCCCGCTCTTGCTAGATCCCCAAGTTCACAGCCATTCCCGACCGGGC AGTCAAGCGGTTAATCCTGCCGACCTCGTCAGCCAGATACCCTCTCCTCATCCCTCGGCTTCTCCGCAATTGTCC CCGATCTCTCCCCAGGACCATTATCAGCACTCATCTCCCGGACCCATGTCGCCGCCCAGCTCGACGCCGGGGACT TACTACACCCCCCAACATTCCCGCCATACTTCCTTGGATCCTGCTAGCGCCGCATACATGTCGGGCAATGTGCAT ACGGATTGGCAGGCAGTCATGGCCAACTCTGCCTTCCAGGGCCATCGACGGGCCCCGTCTGAGGTGTCTGAGGTG TCATCCGCTGCCCCATCTCCATACATGTCTCAGCATGAATCTTTTGATGGCGTGGAGAACAACCCGTCCCCCCTC CTAGCACCCCAGCATGACCCCGGTCTTTACGACAATGCACTAGGCATTGAATCTTTCACTTTGTCGGATGGTCAG CAACAGCACCATCCACAGGGCATCAGCCCTGCTCACAGTCCATATATCTCCCCGCAGTTGATGCCTCAACAGCCC ACAGACATGATTCCCAACGTGCCGTACATCTCTGCTCCTGCGGGCAACACGCAGTACCCCACCCCACCGACCGAC ATGTACGGGGAGGGTATGATGGTCCAAGGAAACGCTGGCATGGGTGATATAGGTCAAGCATCGCAAATGGCGCCC CCATCTATCAACGTGGAATTCGCGCCCCCGGCGAAGAATCTCAACCTCCCGCAGACGAAGCCCAGTGCGGATTTG GACTCGTTGAGTCCACCCGTTGCCATGCGTAAGTTGTCACTGCTCGCCCTATTCTTTGCATTTTCTCGTACAATG TTAACTGCGAGCTTATAGGCTCCCGCATGCGCAGTAAGTCGGACCCATACGCCCACCCGGCTTCTCGCGCACGGT CATCGTCTACCTCGACCAGCCTGGAGCCATTTGTGCCTCCGTCACCCCGGTCGCTGTCGCCCTTTGATACCATGG GGCGACAGCCACATAGTAATCCCAGCTCCCGAGAGCCGTCTCCCTCGCGGTCGGGTCGGCGACTGTCTACGTCGT CGATCGACAGTAGAAATTACATTCTCGGCCTTGCGGATCCCCAGAGGCCTGGGGGCAACCCTAACGACTCCAAAC GTGTCCAGAAACACCCGGCCACGTTCCAGTGTCACCTGTGCCCCAAGCGCTTTACGCGAGCCTACAACCTGCGAT CCCATTTGCGTACGCACACCGATGAACGGCCGTTCGTATGTACTGTCTGCGGGAAAGCCTTTGCGCGACAGCATG ATCGGAAGCGGCACGAGGGGCTGCATTCCGGTGAAAAGAAGTTCGTCTGTCGCGGTGACCTCTCCCGGGGTGGAC AGTGGGGATGTGGTCGGCGATTCGCTCGTGCAGATGCTCTGGGTCGTCATTTCCGTTCCGAAGCTGGTCGGATCT GTATCAAGCCGTTGTTGGATGAAGAGTCTCAAGAGCGGGAGCGCACGATGATGGATCAGCAACAGCACTTACAGC CTATACCACCTCCGTTGATGGTGCCAGGAATGGATGGCCAACATACCAGCAATTTCGTTCTTCCTGCCGCGTTGC TGGCCCAATACCCCGCGCTGCAGACCTTGCAGTGGGATCAGATCCCTGCCACCGCAGACGATCCCAGTGATTTAG GAGGTCGCAGCAGCTTCGATGCTAGTTCCGGCGGAGAGTTTGGGTTTGATGAAGACGAATCTGGCCTCAGTAGTG TCTCTGGCATAAGCGGAAGCTACGGAGGTCCGAGTAACATGTATGATGTGAACAATCCGGGCCAAATGTTAGGAG TAAACCCTGCAGAATCTGGCTATCGAGAAACGGATTGGAGAGCATGA |