© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ani_SJS72_1|g4292.t1 |
| Gene name | |
| Location | scaffold_026:91153..92228 |
| Strand | + |
| Gene length (bp) | 1075 |
| Transcript length (bp) | 828 |
| Coding sequence length (bp) | 828 |
| Protein length (aa) | 276 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF10277 | Frag1 | Frag1/DRAM/Sfk1 family | 1.0E-45 | 6 | 221 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 30 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 7 | 29 | 22 |
| 2 | 59 | 76 | 17 |
| 3 | 97 | 119 | 22 |
| 4 | 134 | 156 | 22 |
| 5 | 163 | 185 | 22 |
| 6 | 200 | 219 | 19 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g4292.t1 MWIISFWIFPIISACTWIAMLIAMLATWAREGSPIYASMETGQTIAYISDVGAQGLKPLFIAGSCVTVVFLDLSF LSERWLRHAGQLVPNKGKFDKACAIASICFSIAGALGLILLSIFDTLRHPHMHDGFLIMFLVGYLISAILICCEY WRLGIFYRSQHKVLLASFIIKLSFVIIEIALAIAFGVLGNKGGHYRNAAAVLEWVIALIFTFYVLSFVIDLLPSV RTRKHVPQGEKVSRNGQTTAAYPDGTYDYEEPVTTDSAGPNANYYRGQRI* |
| Coding | >Ani_SJS72_1|g4292.t1 ATGTGGATTATATCATTTTGGATATTCCCGATTATCTCGGCGTGCACATGGATTGCCATGTTAATTGCGATGCTG GCCACCTGGGCCAGAGAAGGATCGCCGATATATGCCAGTATGGAGACGGGTCAGACCATTGCGTATATTTCCGAC GTTGGAGCACAGGGACTGAAGCCGCTCTTCATTGCGGGCAGCTGCGTCACCGTCGTTTTCCTTGATCTCTCTTTC CTGTCCGAACGCTGGTTGCGACATGCCGGTCAATTGGTCCCAAACAAGGGCAAGTTCGACAAGGCCTGCGCAATC GCATCCATTTGCTTCTCGATCGCCGGAGCCTTGGGACTGATCCTACTTTCGATCTTTGATACTCTTCGTCATCCG CACATGCATGATGGCTTTTTGATCATGTTCCTGGTCGGATACCTGATTAGCGCCATTCTCATTTGCTGCGAATAC TGGCGTCTGGGGATCTTTTATCGTTCCCAGCATAAAGTGCTCCTGGCCAGTTTCATCATCAAACTCTCATTTGTT ATCATTGAAATTGCGCTGGCCATTGCTTTTGGTGTCCTCGGCAACAAGGGTGGTCATTACCGGAACGCAGCGGCA GTTCTGGAATGGGTGATTGCGCTCATCTTCACGTTCTATGTGCTCTCTTTCGTGATCGACCTGCTGCCCTCGGTG CGCACGCGCAAACATGTGCCGCAGGGCGAGAAGGTGTCCCGGAATGGACAGACGACAGCGGCCTATCCCGATGGC ACATATGATTATGAGGAGCCGGTGACGACGGACTCGGCAGGGCCGAATGCTAATTACTACCGGGGGCAGCGGATA TAA |
| Transcript | >Ani_SJS72_1|g4292.t1 ATGTGGATTATATCATTTTGGATATTCCCGATTATCTCGGCGTGCACATGGATTGCCATGTTAATTGCGATGCTG GCCACCTGGGCCAGAGAAGGATCGCCGATATATGCCAGTATGGAGACGGGTCAGACCATTGCGTATATTTCCGAC GTTGGAGCACAGGGACTGAAGCCGCTCTTCATTGCGGGCAGCTGCGTCACCGTCGTTTTCCTTGATCTCTCTTTC CTGTCCGAACGCTGGTTGCGACATGCCGGTCAATTGGTCCCAAACAAGGGCAAGTTCGACAAGGCCTGCGCAATC GCATCCATTTGCTTCTCGATCGCCGGAGCCTTGGGACTGATCCTACTTTCGATCTTTGATACTCTTCGTCATCCG CACATGCATGATGGCTTTTTGATCATGTTCCTGGTCGGATACCTGATTAGCGCCATTCTCATTTGCTGCGAATAC TGGCGTCTGGGGATCTTTTATCGTTCCCAGCATAAAGTGCTCCTGGCCAGTTTCATCATCAAACTCTCATTTGTT ATCATTGAAATTGCGCTGGCCATTGCTTTTGGTGTCCTCGGCAACAAGGGTGGTCATTACCGGAACGCAGCGGCA GTTCTGGAATGGGTGATTGCGCTCATCTTCACGTTCTATGTGCTCTCTTTCGTGATCGACCTGCTGCCCTCGGTG CGCACGCGCAAACATGTGCCGCAGGGCGAGAAGGTGTCCCGGAATGGACAGACGACAGCGGCCTATCCCGATGGC ACATATGATTATGAGGAGCCGGTGACGACGGACTCGGCAGGGCCGAATGCTAATTACTACCGGGGGCAGCGGATA TAA |
| Gene | >Ani_SJS72_1|g4292.t1 ATGTGGATTATATCATTTTGGATATTCCCGATTATCTCGGCGTGCACATGGATTGGTAGCGTCTCCTCCTATATA ACTGCGAGTAAATTTTTCCGACGGACACTTACAAGGTTGTTCTAGCCATGTTAATTGCGATGCTGGCCACCTGGG CCAGAGAAGGATCGCCGATATATGCCAGTATGGAGACGGGTCAGACCATTGCGTAGGTGTCACGCGACCTTAGAT ATGGCATGCGACTGCGATGCTGATTATACACCTTTGTTCATTTCTAGGTATATTTCCGACGTTGGAGCACAGGGA CTGAAGCCGCTCTTCATTGCGGGCAGCTGCGTCACCGTCGTTTTCCTTGATCTCTCTTTCCTGTCCGAACGCTGG TTGCGACATGCCGGTCAATTGGTCCCAAACAAGGGCAAGTTCGACAAGGCCTGCGCAATCGCATCCATTTGCTTC TCGATCGCCGGAGCCTTGGGACTGATCCTACTTTCGATCTTTGATACTCTTCGTCATCCGCACATGCATGATGGC TTTTTGATCATGTTCCTGTTAGTTTTTGCGCATGCGAGAGAAAGACCATTCCGAGGCTGACGTACCTGTAGGGTC GGATACCTGATTAGCGCCATTCTCATTTGCTGCGAATACTGGCGTCTGGGGATCTTTTATCGTTCCCAGCATAAA GTGCTCCTGGCCAGTTTCATCATCAAACTCTCATTTGTTATCATTGAAATTGCGCTGGCCATTGCTTTTGGTGTC CTCGGCAACAAGGGTGGTCATTACCGGAACGCAGCGGCAGTTCTGGAATGGGGTGAGTGACCTGTGAATGACTCT CGGGAAATATAGATAGATTGACTAACTGGAAACAGTGATTGCGCTCATCTTCACGTTCTATGTGCTCTCTTTCGT GATCGACCTGCTGCCCTCGGTGCGCACGCGCAAACATGTGCCGCAGGGCGAGAAGGTGTCCCGGAATGGACAGAC GACAGCGGCCTATCCCGATGGCACATATGATTATGAGGAGCCGGTGACGACGGACTCGGCAGGGCCGAATGCTAA TTACTACCGGGGGCAGCGGATATAA |