Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ani_SJS72_1\|g4290.t1
Gene name
Location	scaffold_026:88284..88806
Strand	+
Gene length (bp)	522
Transcript length (bp)	522
Coding sequence length (bp)	522
Protein length (aa)	174

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF03208	PRA1	PRA1 family protein	4.1E-40	29	169

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 24	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	76	98	22
2	113	135	22
3	142	159	17

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ani_SJS72_1\|g4290.t1 MPLQIPIDAITSRFGERFNSVRSQSLGTRFANLRPISEFLDIKRVSKPAHFGEVQSRVNYNLSYFSSNYAAVFVM LSIYSLLTNPLLLFVIILVTGGLYGIGKLQGHDLELGFARFNTSQLYTGLLIVAVPLGFWASPISTVLWLIGATG VTVFGHAAFMDKPIENAFSEEAV*
Coding	>Ani_SJS72_1\|g4290.t1 ATGCCTCTCCAGATCCCCATTGATGCGATTACCTCGCGCTTCGGCGAACGGTTCAACAGCGTCCGCTCTCAATCC CTCGGCACGCGCTTTGCCAACCTGCGCCCTATCTCCGAATTCCTGGACATCAAGCGTGTCTCCAAACCCGCCCAT TTCGGCGAGGTCCAGAGCCGTGTGAACTACAATTTGTCCTACTTCTCCAGCAACTATGCCGCCGTCTTTGTGATG CTCAGCATCTACAGCTTGCTGACCAACCCCCTGTTGCTCTTTGTCATCATCCTGGTCACTGGTGGTCTTTACGGC ATCGGAAAGCTCCAAGGTCATGACCTGGAACTGGGCTTCGCCCGGTTTAACACCTCCCAACTGTACACCGGACTG CTAATTGTCGCGGTGCCTCTGGGATTCTGGGCCTCGCCCATCTCCACGGTGCTCTGGCTTATCGGAGCCACCGGC GTGACTGTCTTCGGCCACGCCGCTTTTATGGATAAACCAATCGAGAATGCTTTTTCCGAGGAGGCGGTCTAG
Transcript	>Ani_SJS72_1\|g4290.t1 ATGCCTCTCCAGATCCCCATTGATGCGATTACCTCGCGCTTCGGCGAACGGTTCAACAGCGTCCGCTCTCAATCC CTCGGCACGCGCTTTGCCAACCTGCGCCCTATCTCCGAATTCCTGGACATCAAGCGTGTCTCCAAACCCGCCCAT TTCGGCGAGGTCCAGAGCCGTGTGAACTACAATTTGTCCTACTTCTCCAGCAACTATGCCGCCGTCTTTGTGATG CTCAGCATCTACAGCTTGCTGACCAACCCCCTGTTGCTCTTTGTCATCATCCTGGTCACTGGTGGTCTTTACGGC ATCGGAAAGCTCCAAGGTCATGACCTGGAACTGGGCTTCGCCCGGTTTAACACCTCCCAACTGTACACCGGACTG CTAATTGTCGCGGTGCCTCTGGGATTCTGGGCCTCGCCCATCTCCACGGTGCTCTGGCTTATCGGAGCCACCGGC GTGACTGTCTTCGGCCACGCCGCTTTTATGGATAAACCAATCGAGAATGCTTTTTCCGAGGAGGCGGTCTAG
Gene	>Ani_SJS72_1\|g4290.t1 ATGCCTCTCCAGATCCCCATTGATGCGATTACCTCGCGCTTCGGCGAACGGTTCAACAGCGTCCGCTCTCAATCC CTCGGCACGCGCTTTGCCAACCTGCGCCCTATCTCCGAATTCCTGGACATCAAGCGTGTCTCCAAACCCGCCCAT TTCGGCGAGGTCCAGAGCCGTGTGAACTACAATTTGTCCTACTTCTCCAGCAACTATGCCGCCGTCTTTGTGATG CTCAGCATCTACAGCTTGCTGACCAACCCCCTGTTGCTCTTTGTCATCATCCTGGTCACTGGTGGTCTTTACGGC ATCGGAAAGCTCCAAGGTCATGACCTGGAACTGGGCTTCGCCCGGTTTAACACCTCCCAACTGTACACCGGACTG CTAATTGTCGCGGTGCCTCTGGGATTCTGGGCCTCGCCCATCTCCACGGTGCTCTGGCTTATCGGAGCCACCGGC GTGACTGTCTTCGGCCACGCCGCTTTTATGGATAAACCAATCGAGAATGCTTTTTCCGAGGAGGCGGTCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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