Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ani_SJS72_1\|g4241.t1
Gene name
Location	scaffold_025:309387..310539
Strand	+
Gene length (bp)	1152
Transcript length (bp)	864
Coding sequence length (bp)	864
Protein length (aa)	288

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF03661	TMEM33_Pom33	Transmembrane protein 33/Nucleoporin POM33	9.0E-32	18	266

GO

GO Term	Description	Terminal node
GO:0016021	integral component of membrane	Yes
GO:0031224	intrinsic component of membrane	No
GO:0110165	cellular anatomical entity	No
GO:0005575	cellular_component	No

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 11	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	20	42	22
2	55	74	19
3	199	221	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ani_SJS72_1\|g4241.t1 MAPAPPANLPLPERLKALAQTLQFAWFAGHVTLLLSVFRYVLSYITFNYYSSSAQVAYRLAFVSAAATYGIVVYK GHIARGRLQGSVPNIALKLAGDENVQYLGMALVWLYSRQIPLALLPFSVYSIFHVATYTRAHLIPTIQGPAPGAA PGSPASPSGPKPAARPSPLADTIGRFVKQYYDASMHLVAQLEMSLLLRLAVGILTFSKGSFVLFFFYLAFFRARY SQSSFVQQAVRHFIARVDASVSHQSTPPAVRQGWESFKAAVGQAYEATDLNRMSSGAAKKPQ*
Coding	>Ani_SJS72_1\|g4241.t1 ATGGCCCCTGCTCCGCCCGCTAATCTGCCTCTGCCTGAGAGACTCAAGGCTCTGGCTCAAACACTGCAATTTGCT TGGTTCGCTGGGCATGTGACGCTGCTCCTTTCGGTCTTCCGCTATGTCCTGTCCTACATTACGTTCAACTACTAC TCCTCGTCGGCGCAGGTAGCTTACCGCCTTGCGTTTGTTTCCGCTGCCGCGACATACGGAATTGTGGTCTACAAG GGACACATTGCCCGTGGCCGTCTCCAGGGCAGTGTTCCCAACATTGCGCTGAAGCTGGCTGGTGATGAAAATGTC CAGTACCTCGGTATGGCACTGGTCTGGCTCTACTCGCGCCAGATCCCGTTGGCCCTGCTTCCTTTCAGCGTCTAC TCCATCTTCCATGTTGCGACTTACACTCGTGCCCACCTGATTCCCACCATCCAGGGCCCCGCTCCTGGTGCTGCC CCCGGCTCTCCTGCTTCTCCTAGCGGTCCCAAGCCCGCCGCCAGACCTTCTCCCTTGGCCGATACCATTGGACGG TTTGTCAAGCAGTACTATGACGCCAGCATGCACCTGGTCGCTCAGCTGGAGATGTCTCTTCTCCTCCGCTTGGCC GTGGGCATCCTCACCTTCTCCAAGGGTAGCTTTGTGCTCTTCTTCTTCTACCTGGCCTTCTTCCGCGCCAGATAC TCCCAGAGCTCCTTTGTCCAGCAGGCGGTCCGCCACTTCATCGCCAGAGTTGATGCTTCGGTTTCCCACCAGAGC ACCCCCCCTGCGGTTCGCCAGGGATGGGAGTCCTTCAAGGCTGCCGTGGGCCAGGCCTACGAGGCTACGGATCTC AACCGTATGAGCTCCGGTGCTGCGAAGAAGCCCCAATAG
Transcript	>Ani_SJS72_1\|g4241.t1 ATGGCCCCTGCTCCGCCCGCTAATCTGCCTCTGCCTGAGAGACTCAAGGCTCTGGCTCAAACACTGCAATTTGCT TGGTTCGCTGGGCATGTGACGCTGCTCCTTTCGGTCTTCCGCTATGTCCTGTCCTACATTACGTTCAACTACTAC TCCTCGTCGGCGCAGGTAGCTTACCGCCTTGCGTTTGTTTCCGCTGCCGCGACATACGGAATTGTGGTCTACAAG GGACACATTGCCCGTGGCCGTCTCCAGGGCAGTGTTCCCAACATTGCGCTGAAGCTGGCTGGTGATGAAAATGTC CAGTACCTCGGTATGGCACTGGTCTGGCTCTACTCGCGCCAGATCCCGTTGGCCCTGCTTCCTTTCAGCGTCTAC TCCATCTTCCATGTTGCGACTTACACTCGTGCCCACCTGATTCCCACCATCCAGGGCCCCGCTCCTGGTGCTGCC CCCGGCTCTCCTGCTTCTCCTAGCGGTCCCAAGCCCGCCGCCAGACCTTCTCCCTTGGCCGATACCATTGGACGG TTTGTCAAGCAGTACTATGACGCCAGCATGCACCTGGTCGCTCAGCTGGAGATGTCTCTTCTCCTCCGCTTGGCC GTGGGCATCCTCACCTTCTCCAAGGGTAGCTTTGTGCTCTTCTTCTTCTACCTGGCCTTCTTCCGCGCCAGATAC TCCCAGAGCTCCTTTGTCCAGCAGGCGGTCCGCCACTTCATCGCCAGAGTTGATGCTTCGGTTTCCCACCAGAGC ACCCCCCCTGCGGTTCGCCAGGGATGGGAGTCCTTCAAGGCTGCCGTGGGCCAGGCCTACGAGGCTACGGATCTC AACCGTATGAGCTCCGGTGCTGCGAAGAAGCCCCAATAG
Gene	>Ani_SJS72_1\|g4241.t1 ATGGCCCCTGCTCCGCCCGCTAATCTGCCTCTGCCTGAGAGACTCAAGGCTCTGGCTCAAACACTGCAGTATGTG TCGCATGTCCCGGAACTGACAACTGGTACTGACGAGGTCTCTTCTTCTACTTAGATTTGCTTGGTTCGCTGGGTA GGTTATAGCTCCGCCATGTTTCAGCCTGCCTGTTCTGTTTGACGACGTTTCATCATACAATGAAATCACTTGTCC TGGGCCTATCCAGCAGGACTTGCCCACTGGACCATCCCTCGCCAGCTCTCGCTTTGAACGGTCGGACCGAGCATA TTCGCTAACGCACCATAGGCATGTGACGCTGCTCCTTTCGGTCTTCCGCTATGTCCTGTCCTACATTACGTTCAA CTACTACTCCTCGTCGGCGCAGGTAGCTTACCGCCTTGCGTTTGTTTCCGCTGCCGCGACATACGGAATTGTGGT CTACAAGGGACACATTGCCCGTGGCCGTCTCCAGGGCAGTGTTCCCAACATTGCGCTGAAGCTGGCTGGTGATGA AAATGTCCAGTACCTCGGTAAGTGATGGTGTGATCGAGTAGCGAAGACAACGATACTGATAAGCAGTAACCAGGT ATGGCACTGGTCTGGCTCTACTCGCGCCAGATCCCGTTGGCCCTGCTTCCTTTCAGCGTCTACTCCATCTTCCAT GTTGCGACTTACACTCGTGCCCACCTGATTCCCACCATCCAGGGCCCCGCTCCTGGTGCTGCCCCCGGCTCTCCT GCTTCTCCTAGCGGTCCCAAGCCCGCCGCCAGACCTTCTCCCTTGGCCGATACCATTGGACGGTTTGTCAAGCAG TACTATGACGCCAGCATGCACCTGGTCGCTCAGCTGGAGATGTCTCTTCTCCTCCGCTTGGCCGTGGGCATCCTC ACCTTCTCCAAGGGTAGCTTTGTGCTCTTCTTCTTCTACCTGGCCTTCTTCCGCGCCAGATACTCCCAGAGCTCC TTTGTCCAGCAGGCGGTCCGCCACTTCATCGCCAGAGTTGATGCTTCGGTTTCCCACCAGAGCACCCCCCCTGCG GTTCGCCAGGGATGGGAGTCCTTCAAGGCTGCCGTGGGCCAGGCCTACGAGGCTACGGATCTCAACCGTATGAGC TCCGGTGCTGCGAAGAAGCCCCAATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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