© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ani_SJS72_1|g4223.t1 |
| Gene name | |
| Location | scaffold_025:245606..246715 |
| Strand | - |
| Gene length (bp) | 1109 |
| Transcript length (bp) | 969 |
| Coding sequence length (bp) | 969 |
| Protein length (aa) | 323 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF14378 | PAP2_3 | PAP2 superfamily | 9.5E-42 | 118 | 297 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 11 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 71 | 93 | 22 |
| 2 | 152 | 171 | 19 |
| 3 | 238 | 260 | 22 |
| 4 | 275 | 297 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g4223.t1 MGAVKNILEPAAIVAAFTAGSLINRRKNAKLLATPDVESPLLEAPPVDIKPNEEDADERTIRNRRTIQSRILAKF PFLLEIWYWLLTYWIYQGLRAFSARMISGHEAIFDTAERHALSILSFEHFLHLDVELSVQRYVLEQKPWLMGFLA RVYYSHIVLGVIFIVYCYTFLQRDKYQAIRRTLAFENVIAFTILTLWRCMPPRLLPEEYGFIDVLHSNTGGSAWT QNKFQLTIAAMPSLHFGNSMFIAFCLLKFSPHWYLRAVAPIWPMLMALTIVATANHFILDAVVGACVTLTAFRYN TVMLYLLPVERVLFRLLRIEKP* |
| Coding | >Ani_SJS72_1|g4223.t1 ATGGGCGCAGTGAAGAACATTCTAGAGCCTGCGGCGATTGTTGCCGCCTTCACCGCAGGATCACTCATCAATCGG CGCAAGAACGCTAAGCTCCTCGCTACGCCGGACGTCGAGTCACCACTGCTGGAAGCCCCTCCAGTAGACATAAAG CCAAACGAGGAGGACGCTGATGAGCGCACAATCCGAAACCGCCGAACCATACAATCACGGATCCTAGCCAAGTTC CCCTTCTTGTTGGAAATATGGTACTGGCTACTCACATATTGGATCTATCAAGGTTTACGGGCGTTTTCCGCTAGA ATGATTAGTGGCCATGAGGCTATCTTCGACACTGCCGAGCGTCATGCCCTTTCCATCCTCTCATTCGAGCACTTC CTTCACCTCGATGTCGAGCTGTCAGTACAAAGGTATGTGCTTGAGCAGAAGCCATGGCTCATGGGATTCCTGGCT CGGGTATACTATTCACACATTGTCCTCGGCGTGATATTCATCGTCTACTGCTATACCTTCCTCCAACGAGACAAA TATCAAGCAATCAGGCGTACGCTGGCGTTCGAGAATGTCATTGCCTTCACCATCCTTACCTTGTGGAGGTGCATG CCACCTCGCCTGCTGCCAGAAGAGTACGGCTTCATCGACGTTCTGCACAGCAATACAGGCGGCTCAGCTTGGACG CAGAACAAATTCCAACTTACAATTGCAGCGATGCCCTCACTTCATTTTGGAAACTCGATGTTCATTGCATTCTGC CTGCTGAAGTTCAGTCCGCATTGGTACCTTCGGGCTGTGGCGCCCATCTGGCCCATGCTCATGGCACTCACTATC GTTGCGACGGCCAATCATTTCATCCTAGATGCTGTCGTCGGTGCATGTGTGACGCTGACGGCATTTAGATATAAC ACCGTCATGTTGTATCTTCTTCCTGTGGAAAGAGTACTCTTCAGGTTGTTGCGTATAGAGAAACCCTAG |
| Transcript | >Ani_SJS72_1|g4223.t1 ATGGGCGCAGTGAAGAACATTCTAGAGCCTGCGGCGATTGTTGCCGCCTTCACCGCAGGATCACTCATCAATCGG CGCAAGAACGCTAAGCTCCTCGCTACGCCGGACGTCGAGTCACCACTGCTGGAAGCCCCTCCAGTAGACATAAAG CCAAACGAGGAGGACGCTGATGAGCGCACAATCCGAAACCGCCGAACCATACAATCACGGATCCTAGCCAAGTTC CCCTTCTTGTTGGAAATATGGTACTGGCTACTCACATATTGGATCTATCAAGGTTTACGGGCGTTTTCCGCTAGA ATGATTAGTGGCCATGAGGCTATCTTCGACACTGCCGAGCGTCATGCCCTTTCCATCCTCTCATTCGAGCACTTC CTTCACCTCGATGTCGAGCTGTCAGTACAAAGGTATGTGCTTGAGCAGAAGCCATGGCTCATGGGATTCCTGGCT CGGGTATACTATTCACACATTGTCCTCGGCGTGATATTCATCGTCTACTGCTATACCTTCCTCCAACGAGACAAA TATCAAGCAATCAGGCGTACGCTGGCGTTCGAGAATGTCATTGCCTTCACCATCCTTACCTTGTGGAGGTGCATG CCACCTCGCCTGCTGCCAGAAGAGTACGGCTTCATCGACGTTCTGCACAGCAATACAGGCGGCTCAGCTTGGACG CAGAACAAATTCCAACTTACAATTGCAGCGATGCCCTCACTTCATTTTGGAAACTCGATGTTCATTGCATTCTGC CTGCTGAAGTTCAGTCCGCATTGGTACCTTCGGGCTGTGGCGCCCATCTGGCCCATGCTCATGGCACTCACTATC GTTGCGACGGCCAATCATTTCATCCTAGATGCTGTCGTCGGTGCATGTGTGACGCTGACGGCATTTAGATATAAC ACCGTCATGTTGTATCTTCTTCCTGTGGAAAGAGTACTCTTCAGGTTGTTGCGTATAGAGAAACCCTAG |
| Gene | >Ani_SJS72_1|g4223.t1 ATGGGCGCAGTGAAGAACATTCTAGAGCCTGCGGGTAAGTTATATCCCTGCTACTTGCAATCCCGCATCATCCGA AGAAGCATACTGATATTCCCGTCCTCTTGTAGCGATTGTTGCCGCCTTCACCGCAGGATCACTCATCAATCGGCG CAAGAACGCTAAGCTCCTCGCTACGCCGGACGTCGAGTCACCACTGCTGGAAGCCCCTCCAGTAGACATAAAGCC AAACGAGGAGGACGCTGATGAGCGCACAATCCGAAACCGCCGAACCATACAATCACGGATCCTAGCCAAGTTCCC CTTCTTGTTGGAAATATGGTACTGGCTACTCACATATTGGGTGAGACACATCTCGATGCCCAAGGCACACTTCCT ATAGTACCACGCATAACTGACTAGGTGGGCAGATCTATCAAGGTTTACGGGCGTTTTCCGCTAGAATGATTAGTG GCCATGAGGCTATCTTCGACACTGCCGAGCGTCATGCCCTTTCCATCCTCTCATTCGAGCACTTCCTTCACCTCG ATGTCGAGCTGTCAGTACAAAGGTATGTGCTTGAGCAGAAGCCATGGCTCATGGGATTCCTGGCTCGGGTATACT ATTCACACATTGTCCTCGGCGTGATATTCATCGTCTACTGCTATACCTTCCTCCAACGAGACAAATATCAAGCAA TCAGGCGTACGCTGGCGTTCGAGAATGTCATTGCCTTCACCATCCTTACCTTGTGGAGGTGCATGCCACCTCGCC TGCTGCCAGAAGAGTACGGCTTCATCGACGTTCTGCACAGCAATACAGGCGGCTCAGCTTGGACGCAGAACAAAT TCCAACTTACAATTGCAGCGATGCCCTCACTTCATTTTGGAAACTCGATGTTCATTGCATTCTGCCTGCTGAAGT TCAGTCCGCATTGGTACCTTCGGGCTGTGGCGCCCATCTGGCCCATGCTCATGGCACTCACTATCGTTGCGACGG CCAATCATTTCATCCTAGATGCTGTCGTCGGTGCATGTGTGACGCTGACGGCATTTAGATATAACACCGTCATGT TGTATCTTCTTCCTGTGGAAAGAGTACTCTTCAGGTTGTTGCGTATAGAGAAACCCTAG |